ID EF012720; SV 1; linear; genomic RNA; STD; VRL; 5148 BP. XX AC EF012720; XX DT 20-APR-2007 (Rel. 91, Created) DT 20-APR-2007 (Rel. 91, Last updated, Version 1) XX DE Grapevine leafroll-associated virus 2 isolate PG11 heat shock protein 70, DE heat shock protein 90, minor coat protein, major coat protein, and P19 DE genes, complete cds. XX KW . XX OS Grapevine leafroll-associated virus 2 OC Viruses; Riboviria; Closteroviridae; Closterovirus. XX RN [1] RP 1-5148 RX DOI; 10.1016/j.jviromet.2006.11.042. RX PUBMED; 17223202. RA Beuve M., Sempe L., Lemaire O.; RT "A sensitive one-step real-time RT-PCR method for detecting Grapevine RT leafroll-associated virus 2 variants in grapevine"; RL J. Virol. Methods 141(2):117-124(2007). XX RN [2] RP 1-5148 RA Beuve M., Lemaire O.; RT ; RL Submitted (20-SEP-2006) to the INSDC. RL Virology, INRA, 28 rue de Herrlisheim, Colmar 68021, France XX DR MD5; 19e6aafb2faeac59a8ec5f72ed459c40. XX FH Key Location/Qualifiers FH FT source 1..5148 FT /organism="Grapevine leafroll-associated virus 2" FT /host="Vitis vinifera cv. Petit-Meslier" FT /isolate="PG11" FT /mol_type="genomic RNA" FT /country="France" FT /isolation_source="leaves; wood" FT /db_xref="taxon:64003" FT CDS 1..1800 FT /codon_start=1 FT /product="heat shock protein 70" FT /note="HSP70; ORF3" FT /db_xref="GOA:A4ZIR4" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:A4ZIR4" FT /protein_id="ABK59998.1" FT /translation="MVVFGLDFGTTFSTVCVYKDGKVYSFKQNNSAYIPTYLYLFSEAN FT HMVFGYEAESLMHNANVKGSFFRDLKRWVGCDSSNFDDYYDRLKPHYTVRPQKIGTGLN FT DTVIIGNYGGTVRSEVHLPGLIASFIKAIIGCAENAFACACTGVICSVPANYDSVQRNF FT TDQCVSLSGYQCVYMVNEPSAAALSACNLINRKSANLAVYDFGGGTFDVSIISYRNNTF FT VVRASGGDLNLGGRDVDKAFLKHLFSLTSLEPDLSLDISNLKESLSKTDAEIVYTLKGL FT DDKREDVRVNKEILTTVMLPYVNRTLNILEATLKSYAKNMGGLRNVKCDLVLIGGSSYL FT PGLEDILSKHRRIDRVLKVADPRAAVAVGCALYSSCLSGSQGLLLVDCAAHTIAIAGMS FT CDQIICAPAGAPIPFSGTTPLYLARANRNSQRQVAVFEGEYVKCPKNRKICGSNIKFFD FT IGVTSVSYSPITFYLDVGISSVGAISFVVRGPEGKEISLTGTPAYNFSSVVLGTRSVRE FT LHISLSNKVHLGLLLHRKADRRLLFSESEAFRYVETVEVADVLKEFKSYTASSLPLDED FT VEPLMGKSVQKVLRGGRLEEIPL" FT CDS 1727..3331 FT /codon_start=1 FT /product="heat shock protein 90" FT /note="HSP90; ORF4" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:A4ZIR5" FT /protein_id="ABK59999.1" FT /translation="MSNHSWGSLFKKFYGEADWKKYLSRSIVVHTTSVKNLPDAQLYGG FT RIVKKSDFESAAPRSFEQELGLLTLCEREVGWSKMCGISVEEAMYQLTNPEAYPVTAEK FT CDPDVKTEGQKYTMDDVVNFMRSSKLDVDDKVLAEQCWSLSNSCGVLINPDDKERFVAL FT TFKNNELVNDSSNANIDCRVSDYLVYAMSLFNSRTQKSQAGNVSLYERYCAYIRTYLES FT TDLYFTSPNRIPLLTGILYDFCKEYNVFYSTYKRNVDNFRFFLTNYMPLISDIFVFQWV FT KPAPDVRLLFDISAAELTLEVPKLSLIDSQVVIGHVLRFVESYTADPAIEALEEKLDAI FT MKMSNPHLSTAQLWVGFFCYYGEFRTAQRRVVRRPDVYEVPESVGRFEINMKDVEAFFD FT KMQREVPDVSLRRQFNGAKAYEAFKVFKKGKISFKPISRLNVPREFWYLNVDYFRHANR FT SGLSEEEVLILNNISIDVRKLCAERASSTLPSAKRFSKSHKSSVPSLRQERKVRDPLIT FT LRNSLYEFRHRDRDRRV" FT CDS 3294..3965 FT /codon_start=1 FT /product="minor coat protein" FT /note="CPd; ORF5" FT /db_xref="GOA:A4ZIR6" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:A4ZIR6" FT /protein_id="ABK60000.1" FT /translation="MSSGTGIAIGGSEAVETSGFVLSTRKEAVDKFFNELKNENYSSVD FT SSRLSDQEVKEVLEKSKESFKSELASTDDHFVYHIIFFLIRCAIVSTSDKVKYVGSHKY FT VVEGKTYTVLDAWVFNMIKGLTKQYKRVNGLRAFCCACEDLYLTVAPVMSERFKTKAIG FT MKGLPVGKEYLGADFLSGTSKLMSDHDRAVSIISAKNAVDRSAFTGGERKIVSLYDLGR FT N" FT CDS 4050..4646 FT /codon_start=1 FT /product="major coat protein" FT /note="CP; ORF6; 19 kDa" FT /db_xref="GOA:A4ZIR7" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:A4ZIR7" FT /protein_id="ABK60001.1" FT /translation="MDLMSDDNLSGLVITDASSLNGVDKKLLSAEVIKMLIQKGAPSEG FT IEVVFGLLLYALAARTTSPKVQRADSDIIFQNTYGDKTVIVTEADLKKVLEGCAPLSRF FT TNKHRTFGRTFTEAYIDFCVAYKHKLPQLNAAAELGIPAEDSFLAADFLGACPKLSELQ FT QSRKMFASVYALKTEGGIVNTPVSNLRQLGRREVM" FT CDS 4646..5131 FT /codon_start=1 FT /product="P19" FT /note="19 kDa protein; ORF7" FT /db_xref="UniProtKB/TrEMBL:A4ZIR8" FT /protein_id="ABK60002.1" FT /translation="MEICAQSSESLVLLRTNQNTILLIIKSDDNVHLPKIIICGYLRVS FT HRGDVTGCCREDIIKDFEGAHHTVIRSKTIHYDYESAFKEYNDADCVVKFFLETGDVFW FT FFLRSDSKGRSARHLRTFFEANNFFFGSHCGTMEYCLKQVLIETESVIDSFCEERNR" XX SQ Sequence 5148 BP; 1443 A; 999 C; 1280 G; 1426 T; 0 other; atggttgttt tcgggttgga ttttggcaca accttttcga cggtttgcgt ctacaaggat 60 ggcaaggtgt attcctttaa acaaaacaat tctgcgtata ttccgacgta cctctacctc 120 ttttccgaag ctaatcacat ggtttttggt tatgaagccg agtcactgat gcataatgct 180 aatgtgaaag gctctttctt cagggattta aaacgctggg tgggatgtga ttccagtaac 240 tttgatgact actacgatcg tttgaagcct cactacacgg ttcgcccgca aaaaataggc 300 actggtttaa atgacacggt gattattggg aattacgggg gtactgtgcg ttctgaggtg 360 catttgcccg gactaatagc ttccttcatc aaggcgatca ttggttgcgc cgaaaatgct 420 ttcgcttgtg cttgcacagg agtaatatgt tcggtgccgg caaattatga tagcgttcag 480 aggaacttca ctgatcagtg cgtatcctta agcggttacc aatgcgtgta catggtcaac 540 gaaccttccg cagccgcttt atcggcatgt aatttgataa ataggaagtc ggcgaatttg 600 gctgtatatg atttcggcgg tgggaccttt gacgtgtcta ttatttccta ccgcaacaat 660 acgttcgtgg tgcgcgcttc cggaggagat ttgaatttag gaggaagaga cgttgataag 720 gcttttttaa agcatctttt ctccttgaca tctctagaac cagatttgtc gctggacata 780 tcaaatctaa aggaatcgtt atctaaaacc gacgccgaaa tagtttacac gttaaaagga 840 ctcgatgata aaagggagga cgttagagtg aataaggaaa ttctcaccac agtcatgctc 900 ccatacgtta atagaacttt gaacatcttg gaagccacac ttaaatcgta cgccaagaat 960 atgggcggat tacgcaatgt taaatgtgac ttggttttaa tcggtggttc ctcatacctt 1020 ccgggtttgg aagatatctt atcgaagcat cgacggattg atcgagtact gaaagtcgcc 1080 gacccacgag cggcagttgc ggttggttgc gcactttact cgtcgtgcct ctcgggttca 1140 caagggctac tactggtaga ttgcgcggct catactatcg ctatagccgg tatgagctgt 1200 gaccagatta tttgtgctcc agcgggagct cccatcccgt tctcgggtac aacacctttg 1260 tacttagcaa gagctaatag aaattcacaa cgtcaagttg ctgtattcga aggtgagtac 1320 gtgaaatgtc ccaaaaacag gaaaatctgt ggttcaaata taaaattttt tgatatcggt 1380 gttacgagcg tctcgtactc acccatcact ttctatttag atgtaggcat atccagtgtg 1440 ggagccattt cctttgtggt gagaggtccc gaaggaaagg aaatttcctt gacgggcact 1500 cccgcttaca acttttcttc ggtggttctc gggacacgta gtgtccgaga gttgcatatt 1560 agtctaagca ataaggttca tctcggtctg ctcctacacc gaaaggcgga tcggcggtta 1620 cttttttccg aaagcgaagc gtttcgctac gttgaaacgg tagaagttgc agatgtatta 1680 aaggaattta agagttacac cgctagttct ctaccgctgg acgaggatgt cgaaccactc 1740 atggggaagt ctgttcaaaa agttctacgg ggaggcagat tggaagaaat acctctctag 1800 gagcattgtg gttcacacca ccagcgttaa gaacttgccg gacgctcagt tgtacggcgg 1860 tagaattgtg aagaaatccg actttgaatc cgcagcaccg agatcattcg agcaggaact 1920 ggggttattg acgttatgtg aacgggaagt aggctggagt aaaatgtgcg ggatatccgt 1980 agaggaggcg atgtaccaac tcacgaaccc cgaagcatat ccagtcactg ctgaaaaatg 2040 tgatccggac gttaagactg aagggcagaa atatacgatg gatgacgtgg tgaatttcat 2100 gcgctcatct aaattagacg tagatgataa agttttagcg gaacagtgct ggtctctatc 2160 caactcatgc ggggttctaa ttaatcctga cgataaggaa agattcgtgg ccctcacgtt 2220 taaaaacaat gaattggtta atgactcaag caacgcgaac atagattgtc gcgtgagtga 2280 ttacttagtt tacgctatgt cccttttcaa ttctagaact caaaagtcgc aagcgggtaa 2340 cgtttcgctc tatgaaaggt attgcgctta catcagaact tacttggaaa gcactgactt 2400 gtacttcacc tctcccaaca ggataccgtt gcttactggt attctctatg acttttgcaa 2460 ggagtacaat gttttttact ccacgtacaa gcgaaatgtc gataacttca ggttcttcct 2520 aacaaattat atgccattaa tttcggatat atttgtcttc cagtgggtga aaccggctcc 2580 agacgttcga ttattgttcg atataagcgc ggccgaactg actttggaag ttccgaagtt 2640 aagtttaata gattcgcagg tggtgatagg acacgtcctg aggtttgtcg aatcgtacac 2700 agctgatccg gctatcgaag cgttggaaga gaaattggat gccataatga agatgagtaa 2760 tcctcatcta tcaacggcac aattgtgggt gggatttttc tgttattacg gtgaatttcg 2820 taccgcgcaa cgtcgagtgg tgcggagacc agacgtgtat gaggtgcctg agtcggtcgg 2880 aaggttcgaa attaacatga aagatgtcga agcgtttttt gataagatgc aacgagaagt 2940 accagatgtg tctttacggc gacaattcaa tggggccaaa gcgtatgaag catttaaagt 3000 gtttaaaaag gggaagatta gtttcaaacc tatctctcgc ttaaacgtac caagggaatt 3060 ctggtatctg aatgtggatt actttagaca tgcgaataga agcgggttga gcgaagaaga 3120 ggtgctcatt ctgaataata taagcataga tgttcgaaaa ttgtgtgctg aaagagcgag 3180 cagcactctg cctagcgcaa agcgctttag caaaagtcat aaaagtagcg tgccatcgtt 3240 gcgtcaagag cgtaaagtta gagatccgtt gattacatta aggaattcct tatatgagtt 3300 ccggcacagg gatcgcgata ggagggtctg aggctgtgga gacctcaggt ttcgtgctat 3360 ctacgcgaaa agaagctgtc gacaagttct ttaatgaact aaagaacgaa aactattcct 3420 cggtcgacag cagtcggttg agcgaccaag aggtaaaaga agttttagag aaaagcaaag 3480 aaagcttcaa gagtgaactg gcgtctaccg atgatcactt tgtttaccac attatcttct 3540 ttctgattcg atgcgccatc gtatccacaa gcgataaggt gaaatacgtt ggaagccaca 3600 aatatgtagt cgaaggaaaa acttacactg ttctcgacgc gtgggttttc aacatgatta 3660 aggggctgac aaagcagtac aaaagagtga atggtttgcg cgccttttgt tgcgcctgcg 3720 aagatttata cttgacagtc gcacccgtaa tgtcggaacg tttcaagact aaagctatcg 3780 gtatgaaggg cttacccgtt ggaaaggaat acttaggagc ggactttctc tcaggaacga 3840 gtaaattaat gagcgatcat gatagagcgg tgtctataat ctcggctaag aacgctgtgg 3900 atcgtagcgc ttttactggt ggggagagaa agatagttag tttgtatgac ttaggaagga 3960 actaagcacg ttgtgcaata gcacgcgtca taatattaag tactagtgca taacaaagca 4020 gtagcgttta aactgtggtg atagagataa tggatttaat gtctgacgac aacttaagcg 4080 gtctcgtcat aaccgacgcc tctagtctga atggtgtcga taagaaactg ctgtccgcgg 4140 aggtcataaa gatgctcata cagaaggggg cgcctagtga aggtatcgaa gtagtcttcg 4200 gattgttgct ttacgctctc gcagcaagaa ccacgtcgcc caaagttcaa agggctgact 4260 ctgatattat ttttcagaac acttatggag ataaaaccgt catcgtaacg gaggctgatc 4320 tcaagaaagt gctcgaagga tgtgcacctc ttagtaggtt tactaacaaa catcgaactt 4380 tcggtcgcac gttcacggaa gcctatattg atttctgcgt ggcttacaaa cataagctac 4440 ctcaactcaa cgcggccgcg gaattgggga taccagcaga agattcattc ttagctgcgg 4500 actttttggg tgcttgtccg aaactctctg aattacagca aagtagaaaa atgtttgcga 4560 gtgtttatgc tctgaaaact gagggtggaa tagtgaatac acccgttagc aatttgcgcc 4620 aactgggtag gagagaagtt atgtgatgga aatttgtgct caaagttccg agtcactagt 4680 gctattacgc acgaatcaaa atacgattct attaatcatc aagtcagatg acaatgttca 4740 cttacccaaa ataataatat gcgggtactt acgcgtgtcg catcgtggag atgtgacagg 4800 ttgctgtcgc gaggacataa taaaggattt cgaaggagcg catcatactg tcattcgctc 4860 gaaaacgata cattatgatt acgaatccgc gtttaaagaa tataacgacg ctgattgcgt 4920 agtgaaattc tttttggaga ctggagatgt cttttggttt tttctccgaa gcgatagcaa 4980 aggaagatcg gcgcgacatt tgcgtacttt cttcgaagct aacaatttct tctttggatc 5040 gcattgcggt accatggagt attgtttgaa gcaggtactg atagaaactg agtctgtaat 5100 cgattctttt tgtgaggaaa gaaatcgtta agatgagggt gattgtat 5148 //