ID   DQ925462; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   DQ925462;
XX
DT   30-JUN-2007 (Rel. 92, Created)
DT   06-MAR-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Turnip mosaic virus isolate TuMV-VN/Bj3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1677
RX   DOI; 10.1007/s00705-007-1067-1.
RX   PUBMED; 17906829.
RA   Ha C., Revill P., Harding R.M., Vu M., Dale J.L.;
RT   "Identification and sequence analysis of potyviruses infecting crops in
RT   Vietnam";
RL   Arch. Virol. 153(1):45-60(2008).
XX
RN   [2]
RP   1-1677
RA   Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.;
RT   ;
RL   Submitted (29-AUG-2006) to the INSDC.
RL   Institute of Health and Biomedical Innovation, Queensland University of
RL   Technology, 2 George Street, Brisbane, Queensland 4001, Australia
XX
DR   MD5; a68b57ab2a602b45b8f2c6d462fc3f6f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Turnip mosaic virus"
FT                   /host="Chinese mustard (Brassica juncea)"
FT                   /isolate="TuMV-VN/Bj3"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam:Laichau"
FT                   /isolation_source="infected plant"
FT                   /collection_date="2004"
FT                   /note="sample 1254"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..1468
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A6XP64"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:A6XP64"
FT                   /protein_id="ABL09437.1"
FT                   /translation="DNTLMVILAVNYSIKKSGIPGELRNSIIRLFVNGDDLLLSVHPEY
FT                   EYILDTMADNFRELGLKYTFDSRTREKGDLWFMSHQGHKREGIWIPKLEPERIVSILEW
FT                   DRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPFSSLAQEGKAPYIAETA
FT                   LRKLYLDKEPAQEDLTHYLQTIFEDYEDGAEACVYHQAGETLDAGLTDDQKQAEKEKKE
FT                   REKAEKEREKQKQLALKKGKDVAQEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYE
FT                   QRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWC
FT                   IENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRDQDR
FT                   PYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDG
FT                   NVGTTVENTERHTTEDVNRNMHNLLGVKGL"
FT   mat_peptide     <1..601
FT                   /product="NIb"
FT   mat_peptide     602..1465
FT                   /product="CP"
XX
SQ   Sequence 1677 BP; 520 A; 331 C; 435 G; 391 T; 0 other;
     agacaacacg ctcatggtca tactggcagt caactattca atcaagaaaa gtggaattcc        60
     aggtgagttg cgtaacagca tcatcagatt atttgtcaac ggagatgatt tactgctaag       120
     cgtacaccca gagtatgagt atatccttga cactatggca gacaacttcc gcgaactggg       180
     cctgaagtat actttcgact caaggaccag ggaaaaagga gacctttggt ttatgtcgca       240
     ccaagggcac aaaagagagg gaatctggat tcctaagctt gagccagagc gaatagtatc       300
     gattctagaa tgggatcggt cgaaagagcc atgccatcga ctagaggcaa tctgcgcagc       360
     gatgattgag tcgtggggat acgacaagtt gactcacgag atacgcaagt tttacgcgtg       420
     gatgattgaa caagctccat ttagctcctt agcacaggaa gggaaagctc cttatatagc       480
     ggaaacagcg ctgaggaagc tctaccttga taaggaacca gctcaagagg atctcaccca       540
     ttatttgcaa acaatctttg aggattacga agatggtgct gaggcttgtg tttatcacca       600
     ggcaggtgaa acgcttgatg caggtctgac agacgatcaa aagcaggcgg agaaggagaa       660
     aaaggagaga gagaaggcag aaaaggaacg agagaagcag aagcagttgg cactcaagaa       720
     aggcaaggat gttgcacaag aagagggaaa acgcgacaag gaagtaaacg ctggaacctc       780
     tggaactttt agtgtaccca gacttaagag tctgacaagc aagatgcgcg tgccaagata       840
     cgagcaaaga gtggctctaa acctcgatca tctaatccta tacacgccgg agcagacgga       900
     tctatctaac acacgttcaa cgcgaaagca gtttgacaca tggtttgaag gtgtaatggc       960
     tgattacgaa ctgacggagg acaaaatgca aattattctc aatggtttaa tggtctggtg      1020
     cattgagaat ggaacctccc cgaacataaa cggaatgtgg gtgatgatgg acggcgatga      1080
     tcaggtggaa ttcccgatca agccgctcat tgaccacgcc aaacccacat ttaggcagat      1140
     aatggcccat ttcagtgacg tagctgaagc gtacattgaa aagcgtgacc aagaccgacc      1200
     atacatgcca cgatatggtc ttcagcgcaa tttaaccgac atgagtttag ctcgatacgc      1260
     atttgatttc tatgaaatga cttctagaac tccaatacgt gcgagagaag cacacatcca      1320
     gatgaaagca gcagcactgc gtggcgcaaa taacaatttg ttcggcttgg atggaaacgt      1380
     tggcacaacg gtagagaaca cggagaggca tacgaccgag gacgttaatc ggaacatgca      1440
     taacttactt ggcgttaagg ggttatgaag ttgtatgctg gtagactata agtatttaag      1500
     tttactcgtt agtattctcg cttacgggaa atatgtaagt ttgttaaagc agccagtgtg      1560
     actttgtcat gtgtgttgtt gttactttct atattttcgc cgaacatttt attggtgtta      1620
     gcgcatgtgg tgaggattgt cctcgattgc cttaacattt gataggatgc aagggac         1677
//