ID   DQ925455; SV 1; linear; genomic RNA; STD; VRL; 1604 BP.
XX
AC   DQ925455;
XX
DT   30-JUN-2007 (Rel. 92, Created)
DT   06-MAR-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Onion yellow dwarf virus isolate OYDV-VN/L5 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1604
RX   DOI; 10.1007/s00705-007-1067-1.
RX   PUBMED; 17906829.
RA   Ha C., Revill P., Harding R.M., Vu M., Dale J.L.;
RT   "Identification and sequence analysis of potyviruses infecting crops in
RT   Vietnam";
RL   Arch. Virol. 153(1):45-60(2008).
XX
RN   [2]
RP   1-1604
RA   Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.;
RT   ;
RL   Submitted (29-AUG-2006) to the INSDC.
RL   Institute of Health and Biomedical Innovation, Queensland University of
RL   Technology, 2 George Street, Brisbane, Queensland 4001, Australia
XX
DR   MD5; 3b6c5d165f3193c3e7965de4eb1b4e99.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1604
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Leek (Allium porrum)"
FT                   /isolate="OYDV-VN/L5"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam:Hanoi"
FT                   /isolation_source="infected plant"
FT                   /collection_date="2004"
FT                   /note="sample 1282"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1390
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A6XP57"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:A6XP57"
FT                   /protein_id="ABL09430.1"
FT                   /translation="PTVVDNTIMVMLSVQYALRKCGIAVDKQNEIIKYFCNGDDLLIAI
FT                   HPTYENILNKFQQYFHELGLDYDFSNRSRSKEDVYFMSHRGLLRDGIFIPKLDKERVVS
FT                   ILEWDRADKPEHRLEAICASMIEAWGYPDLLHEIRKFYQWLLEQAPYNEIAQSGKAPYI
FT                   AETALKKLFTNIDASEVELEKYYEMYMDLENEEVVPKEVRYQAGKGEDAAAQSSTAQQI
FT                   AKQKDKDVDAGTTGTFTIPRIKALSDKMRFPRVGKTVVLNAEHLLAYKPEQIELYNTRS
FT                   TKQQFKNWYNAIKKDYDVNDDQMKILLNGLMVWCIENGTSPNLSGNWTMMDGDEQVEYP
FT                   LAPIVDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFY
FT                   EMTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTAEEDTERHTAADINKNQHTLL
FT                   GIKM"
FT   mat_peptide     <1..616
FT                   /product="NIb"
FT   mat_peptide     617..1387
FT                   /product="CP"
FT   3'UTR           1391..1604
XX
SQ   Sequence 1604 BP; 549 A; 274 C; 368 G; 413 T; 0 other;
     acccactgtt gttgacaaca caattatggt gatgttgagt gtacaatacg ccttgcggaa        60
     atgtggcata gcggtagata aacaaaacga aatcatcaaa tatttttgta atggtgatga       120
     tttattgata gcgatacatc cgacatacga aaacatactc aacaaatttc aacagtattt       180
     tcatgaactt ggattagatt acgacttctc aaataggagt agatcgaaag aggatgtata       240
     ctttatgtca catagagggc tactcagaga cggaattttc ataccaaaat tagataagga       300
     acgtgttgtt tcgatacttg agtgggatcg agcagacaag cctgagcatc gattggaagc       360
     tatatgcgcg tccatgattg aagcatgggg ttatcccgac cttttacacg aaatccgaaa       420
     gttttatcaa tggcttctag aacaagctcc atataacgaa atagctcaga gtggaaaagc       480
     accttatata gcagaaacag ctctcaagaa gttattcacc aacattgatg cgagtgaggt       540
     agagttggag aaatactacg aaatgtatat ggacctagag aacgaggaag tggttcctaa       600
     ggaagttcgt tatcaggcgg gaaaagggga agatgcagca gcacaatcaa gcacagcaca       660
     acagattgct aagcagaagg acaaagatgt tgatgctggc actactggta catttacaat       720
     tcccaggata aaggcattgt ctgataaaat gaggtttcca agggtcggca aaactgttgt       780
     acttaatgca gaacacttgt tggcatacaa gccagagcaa atagaattgt acaacacgag       840
     atcaacaaag caacagttta aaaattggta caatgcaata aagaaagatt atgatgttaa       900
     tgatgaccaa atgaaaattt tgttaaatgg tttaatggtt tggtgcatag agaatggaac       960
     atctcctaac ttgtcaggaa attggactat gatggatggc gacgaacagg tcgagtatcc      1020
     attagcgcca atcgtggata atgcaaaacc gacatttagg caaataatgg cgcatttcag      1080
     tgatgcagct gaagcataca ttgaatacag aaacgccaca gagaagtata tgccccgata      1140
     tggacttcag cgaaacttaa cagaacttag tttggcacgt tacgcattcg atttttatga      1200
     aatgacttcg aaaacaccta aacgggcaaa agaagcacat atgcagatga aggcggctgc      1260
     ggttagaggg gcaactaacc gtttgtttgg cctggatggt aacgtcaaca cagcagaaga      1320
     ggacacggaa agacacacag ctgcggatat taataagaac cagcacacgt tgcttggtat      1380
     taaaatgtga aatcgcactt ctgtcttcag ctttatatat atatggttat ataaggacgt      1440
     atataatatg taattctctt catttcgttt aatctgactt cgagcaacga aatgtggtgt      1500
     accactagtt gtggcgaacg atacggttaa acatctgtga ttaatgtcga acttcatgag      1560
     agtgatgtat cacgaggtga atttttggcg tgaattacgg agac                       1604
//