ID   DQ925454; SV 1; linear; genomic RNA; STD; VRL; 1603 BP.
XX
AC   DQ925454;
XX
DT   30-JUN-2007 (Rel. 92, Created)
DT   06-MAR-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Onion yellow dwarf virus isolate OYDV-VN/L4 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1603
RX   DOI; 10.1007/s00705-007-1067-1.
RX   PUBMED; 17906829.
RA   Ha C., Revill P., Harding R.M., Vu M., Dale J.L.;
RT   "Identification and sequence analysis of potyviruses infecting crops in
RT   Vietnam";
RL   Arch. Virol. 153(1):45-60(2008).
XX
RN   [2]
RP   1-1603
RA   Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.;
RT   ;
RL   Submitted (29-AUG-2006) to the INSDC.
RL   Institute of Health and Biomedical Innovation, Queensland University of
RL   Technology, 2 George Street, Brisbane, Queensland 4001, Australia
XX
DR   MD5; 26308ad0d122150e1a1f4b437fecad0c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1603
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Leek (Allium porrum)"
FT                   /isolate="OYDV-VN/L4"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam:Sonla"
FT                   /isolation_source="infected plant"
FT                   /collection_date="2004"
FT                   /note="sample 1264"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1390
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:A6XP56"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:A6XP56"
FT                   /protein_id="ABL09429.1"
FT                   /translation="STVVDNTIMVMLSVQYALRKCGIEVGKQTEVIKYFCNGDDLLIAI
FT                   HPDYENILDNFQQFFKELGLDYDFSSRSRSKEDVYFMSHRGLLRDGIYIPKLDRECVVS
FT                   ILEWDRADKPEHRLEAVCASMIGAWGYPDLLHEIRKFYQWLLEQAPYNVIAQSGKAPYI
FT                   AETALRKLFTDIDASEGELEKYYEMYMDLENEETISKEVHYQAGEGEDAAAQSNTSQQV
FT                   AKQKDKDVDAGTTGTFAIPRIKAISDKMRFPRVGKIVVLNAEHLLAYKPEQIELYNTRS
FT                   TKQQFENWYNAVKREYGVNDERMKILLNGLMVWCIENGTSPNLSGNWTMMDGDEQVEYP
FT                   LAPIVDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGIQRNLTELSLARYAFDFY
FT                   EMTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADINKNQHTLL
FT                   GVTM"
FT   mat_peptide     <1..616
FT                   /product="NIb"
FT   mat_peptide     617..1387
FT                   /product="CP"
FT   3'UTR           1391..1603
XX
SQ   Sequence 1603 BP; 538 A; 265 C; 381 G; 419 T; 0 other;
     atcaactgtt gttgataaca caattatggt catgttgagt gtgcaatatg ccttgcggaa        60
     atgtggcata gaagttggaa aacaaactga ggtaatcaaa tatttttgta atggcgatga       120
     tttactgatt gcaatacatc cggattatga aaatatactt gataacttcc aacagttttt       180
     caaggaactt ggcttggatt atgacttttc aagtagaagt aggtcgaagg aggatgtata       240
     ttttatgtca catagagggt tactcagaga cggaatctat ataccaaaat tggataggga       300
     atgtgtcgtt tcgatacttg agtgggatcg cgcagacaag cctgaacata ggttggaagc       360
     cgtatgtgca tccatgattg gagcatgggg ttatccagat ctcctacacg aaattcgtaa       420
     gttctatcaa tggctcctcg agcaagctcc atataatgtg atagctcaga gtggaaaagc       480
     accttacata gcagaaacag ctctcaggaa gttgtttacc gacattgatg cgagtgaggg       540
     agaattggaa aagtattacg aaatgtatat ggatcttgag aacgaagaaa caatttcaaa       600
     ggaggttcat tatcaagcag gagaagggga agacgcagcg gcgcaatcaa atacgtcgca       660
     acaagttgcg aaacaaaagg ataaagacgt tgacgctggc accactggta cgtttgcaat       720
     ccctagaatc aaggcgatat ccgataaaat gagatttcca agagttggta aaatcgttgt       780
     gcttaatgca gaacacttgt tagcatataa gccagagcaa attgaactat ataatacaag       840
     atcaacaaag cagcaatttg aaaactggta caacgcagta aagagagagt atggtgttaa       900
     cgatgagcga atgaaaatac tactaaacgg cttaatggtt tggtgtattg aaaatggaac       960
     atcgcctaat ttatcaggaa attggactat gatggatggc gatgaacaag ttgaataccc      1020
     attggcgcca atcgtggata acgcaaaacc aacatttagg cagataatgg cgcatttcag      1080
     tgatgcagct gaagcataca ttgaatatag gaacgccacg gaaaaataca tgccccggta      1140
     tggaattcag cgaaatctaa cagaacttag tttagcacgt tacgcattcg acttttatga      1200
     gatgacttca aagactccca aacgggcaaa agaagcacac atgcaaatga aggcggctgc      1260
     ggttagaggg gcaactaacc gtttgtttgg cctggatggt aacgtaaaca caacagaaga      1320
     ggacacggaa agacacacag ctgcggatat caataaaaac cagcacacgt tgcttggtgt      1380
     tacaatgtga ggccgtgtta gtgtctttag ttttatatat atatatttat ataaaaacgt      1440
     atgtaatatg taattctctt catttcgttt aatctgactt cgagcaacga aatgtggtgt      1500
     accactagtt gtggcgaacg atatggttaa atatctgtga ttaatgtcga acttcatgag      1560
     agtgatgtat cacgaggtgg attttggcgt gaattacgga gac                        1603
//