ID DQ922807; SV 1; linear; genomic RNA; STD; VRL; 4266 BP. XX AC DQ922807; XX DT 19-OCT-2006 (Rel. 89, Created) DT 19-OCT-2006 (Rel. 89, Last updated, Version 1) XX DE Melon necrotic spot virus isolate MNSV-ISR from Israel, complete genome. XX KW . XX OS Melon necrotic spot virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Gammacarmovirus. XX RN [1] RP 1-4266 RA Barkan G., Hadas R., Leibman D., Gal-On A.; RT "Characterization of MNSV isolate infected melon in Israel"; RL Unpublished. XX RN [2] RP 1-4266 RA Barkan G., Hadas R., Leibman D., Gal-On A.; RT ; RL Submitted (17-AUG-2006) to the INSDC. RL Virology, Volcani Center A.R.O, P.O. BOX 6, Bet-Dagan 50250, Israel XX DR MD5; b249695e1be713e4dc77383e5f024242. DR EuropePMC; PMC4337425; 24372390. DR EuropePMC; PMC5712577; 29238357. DR EuropePMC; PMC5954562; 29868081. XX FH Key Location/Qualifiers FH FT source 1..4266 FT /organism="Melon necrotic spot virus" FT /isolate="MNSV-ISR" FT /mol_type="genomic RNA" FT /country="Israel" FT /db_xref="taxon:11987" FT CDS 88..2463 FT /codon_start=1 FT /transl_except=(pos:892..894,aa:OTHER) FT /product="putative RNA-dependent RNA polymerase" FT /note="produced by a readthrough of the amber codon; FT replicase; 89K protein" FT /db_xref="GOA:Q007A1" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q007A1" FT /protein_id="ABJ53276.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCCKIAKVATIVGIGYLGVRIGAAWCRRTPGIINSIITYGEEVVEQVKVDIDE FT DAEEESDIGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLTHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS FT VRRGTHPDMTEFSQDRPIKTRKLYCLGGVGTSVKFNVHNNSLANLRRGLIERVFFVEND FT RKELEPAPKPLSGAFDRLTWFRRKLHNIVGTHSSISPGQFLDFYTGRRRTIYEGAVKSL FT EGLSVQRRDAYLKTFVKAEKINTTKKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRG FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSSDALKWEHSVY FT LDAFCHDSYLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH FT DFFRSRGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEIFEQIE FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGINHARKWVNAVGLCGLSLTGGIPV FT VQSYYNMTIRNTQSVNSSGILRDVSFASGFRELARLGNRKCGAISEDARFSFYLAFGIT FT PDLQRAMESDYDAHTIEWGFVPQGNPRIQPISWTLNEL" FT CDS 88..894 FT /codon_start=1 FT /product="29K protein" FT /db_xref="UniProtKB/TrEMBL:Q007A0" FT /protein_id="ABJ53277.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCCKIAKVATIVGIGYLGVRIGAAWCRRTPGIINSIITYGEEVVEQVKVDIDE FT DAEEESDIGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLTHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVN" FT CDS 2442..2828 FT /codon_start=1 FT /transl_except=(pos:2637..2639,aa:OTHER) FT /product="14K protein" FT /note="produced by a readthrough of the amber codon" FT /db_xref="GOA:Q006Z9" FT /db_xref="InterPro:IPR007982" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:Q006Z9" FT /protein_id="ABJ53281.1" FT /translation="MDPQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAISESKQG FT VMGASTYIADKIKVTINFNFXCMACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGN FT TYVHHFDNSSVKTQYVGISTNGDG" FT CDS 2442..2639 FT /codon_start=1 FT /product="p7A protein" FT /db_xref="GOA:Q006Z8" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q006Z8" FT /protein_id="ABJ53279.1" FT /translation="MDPQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAISESKQG FT VMGASTYIADKIKVTINFNF" FT CDS 2643..2828 FT /codon_start=1 FT /product="p7B protein" FT /db_xref="GOA:Q8UYH9" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:Q8UYH9" FT /protein_id="ABJ53280.1" FT /translation="MACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGNTYVHHFDN FT SSVKTQYVGISTNGDG" FT CDS 2815..3987 FT /codon_start=1 FT /product="coat protein" FT /note="42K protein" FT /db_xref="GOA:Q006Z6" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q006Z6" FT /protein_id="ABJ53278.1" FT /translation="MAMVRRINNLPTVKLAKQALPLLTNPKIANKAIDVVPLVVQGGQK FT LSKAAKRLLGAYGGNISFTEGARPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI FT ASVLPSNDLTVNNGDVNVGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSAPWAENVLVVPCDNTWRYMNDTNAV FT DRKLVDIGQFLFATYSGAGNTAHGDLYVEYAVEFKDPQPIAGMVCMFDRSVSSSEVGST FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATSIGSLIFAGNSKLVGNSLNVS FT SSGASVLTFTLNSSGVPNSSDSSFSVGTVVALTRVRVTITRCSPETAYLA" XX SQ Sequence 4266 BP; 1083 A; 890 C; 1048 G; 1245 T; 0 other; ggattactct agccggatcc ccgactctct tatttttgta agttagttcg tatattgatt 60 atctatcttg atcaatatag gttagcaatg gatactggtt tgaaatttct tgtttctgga 120 ggtttagcca cctcatctgt tatcaggaaa gtgagtgctg tgagttcatt ggattcgtcc 180 cttccttcat catctatatt atctgccatc catgggtctt ggactagtgc tatcagccac 240 gattgttgta aaatcgccaa ggttgccacc atagttggta ttggttatct tggggttagg 300 attggtgccg cttggtgccg tcgtactccc gggataataa attccataat cacctatggg 360 gaagaagtgg ttgagcaagt gaaggtggat attgatgaag atgctgaaga ggagtccgat 420 attggtgagg aaattgtggt tggtacgata ggtattggta tacacacgaa cgtcaaccca 480 gaagttcgag ctaagcgcag acatagatcg aggccattca ttaagaagat tgtgaattta 540 acgaagaatc acttcggtgg gtgccccgac tccagcaaat cgaacgtcat ggctgtaagc 600 aaattcgttt atgaacaatg caagcagcac aattgtcttc cacatcaaac gagattgatc 660 atgagtgttg cagttccatt ggtgctaagt cccgatatgt acgacatttc cagcaaagct 720 ctgctaaaca gcgagatatt gacagaaaac agagctacgc tggaccgcct caaaactctt 780 gatgggtggt tgacacattt ggtgtgccat ccccttagcg cgaaggcttg gaggcgggca 840 attgacaact tgtgtggtct tccagattgg aaggctttca agttggtcaa ctaggggtgc 900 ctagaggaac tcgctgggtt ctgtacttcg gtacggagag ggacacaccc agacatgacc 960 gagttttctc aggatcgtcc tattaagaca cgcaaactgt attgtttagg gggagttgga 1020 actagcgtga agttcaatgt gcacaataac tccctagcta accttcggcg cggtctaatt 1080 gaacgcgttt tctttgttga aaatgatagg aaggaactag agcctgcccc taaacctctt 1140 agtggtgctt ttgatcgctt aacttggttt cgtcggaaac ttcataatat tgtgggtact 1200 cattccagta ttagtccagg tcaattcttg gacttctata ctggcaggag gcgcacgatc 1260 tatgaaggtg ctgtgaaatc attggagggg ttaagtgttc aacgaaggga tgcctatctg 1320 aaaacgtttg ttaaggcgga gaagattaac accactaaga agcctgaccc agctccgcgg 1380 gtcatacaac cgaggaacgt aagatataat gttgaggttg gtcgttatct acgtaggttt 1440 gagcattacc tctatcgagg aattgacgaa atctggaatg gccccactat aataaaagga 1500 tacactgtcg agcaaattgg gaaaatcgcc cgtgacgctt gggactcatt cgttagtcct 1560 gtagcaatcg ggtttgatat gaaaaggttc gaccaacatg tatcctccga tgctcttaaa 1620 tgggaacata gtgtttatct tgatgctttt tgccacgact catatctcgc agaattgtta 1680 gagtggcaat tagtcaataa gggtgtcggg tatgctagtg atggaatgat taaatataag 1740 gttgatgggt gccggatgag cggtgacatg aatacagcta tgggtaactg tttgatcgcc 1800 tgtgctatta cgcatgattt cttccgtagt cgtggtatca gagcgcgttt gatgaacaat 1860 ggtgatgact gtgtcgtaat atgtgaaaaa gaatgtgccg cggtggttaa agccgacatg 1920 gtaaggcact ggagacaatt cgggtttcaa tgcgaactcg agtgcgacgc agaaattttc 1980 gagcagattg aattttgtca aatgcggcct gtgtacgacg gggagaaata tgtgatggtg 2040 cggaatcctt tggttagcct atctaaagat tcctactcag tcggcccttg gaatggaatc 2100 aaccatgcac gcaagtgggt caacgcagtt ggcttgtgtg gcttatccct cactggtgga 2160 attcctgttg tccagagtta ttataacatg acgatccgca acacccaatc cgtaaatagt 2220 tctggcatac tacgcgatgt cagtttcgct agcggatttc gggaattagc gcgattgggt 2280 aacaggaaat gtggtgccat atcagaagac gcccgtttta gcttttatct cgcatttggc 2340 attactccag atttacaacg tgccatggaa agtgactatg atgctcatac tatagagtgg 2400 ggttttgtac cccagggaaa tcctagaata cagccaatct catggaccct caacgaactg 2460 tagaacaaac taatcctcgt ggaagaagta aagaacgtgg tgatagcggg ggaaaacaga 2520 agaactcaat ggggcgaaag atagccaatg atgctatctc tgaatcgaag caaggagtta 2580 tgggtgctag tacatacatt gctgataaaa ttaaggtgac tatcaacttt aatttttagt 2640 gtatggcttg ctaccgttgc gactccagcc ccggggatta ctccggagca ttgcttatat 2700 tatttatctc atttgttttc ttttatatta cctcgcttag cccgcaagga aatacttacg 2760 ttcatcactt cgataattct tccgttaaaa cacaatacgt tggcatctct acaaatggcg 2820 atggttagac gcattaataa tttacccaca gtgaagcttg ctaagcaggc tctacccctg 2880 ctaacgaatc ctaaaattgc aaataaagct atagatgtgg ttcctctggt cgtccaaggt 2940 ggtcagaaat tgtccaaggc tgctaagcga ttgctcggcg cttatggagg taatatttcg 3000 ttcactgagg gtgccagacc aggcgcaata tcagctcctg tcgctattag tcggcgagtg 3060 gctggcatga agcctaggtt cgtccgatca gaaggatctg tgaagatagt tcacagggag 3120 tttattgctt ctgttcttcc ttcgaatgat ctcactgtta ataacggtga tgtcaacgtt 3180 ggtaagtaca gggtcaatcc cagtaataac gctttattta catggcttca gggacaagca 3240 caactatatg atatgtacag atttactcgg ctccgtttca cctacattcc tactaccgga 3300 tcaacttcta cgggtcgtgt ctctatcctt tgggatagag attctcagga ccccctcccc 3360 attgatcgtg cagccattag ctcttatgct cattacgctg attcagcgcc ttgggctgag 3420 aatgttctag tggttccttg tgacaatacg tggaggtaca tgaatgatac caatgccgtc 3480 gaccggaagt tggttgatat tgggcagttc cttttcgcta cttattctgg tgctggtaac 3540 accgcccatg gtgatcttta cgtcgagtat gctgtagaat ttaaggaccc ccagcctatc 3600 gctggtatgg tatgcatgtt tgatcgctct gtctcttcct ctgaagttgg atccactatt 3660 aagggagtca attatattgc tgatcgtgat gtgataacca ctggaggcaa tattggtgtt 3720 aacatcaata ttcccgggac ctatctcgtc acgattgttc ttaatgccac atcgattggt 3780 tccctcatct tcgctggtaa ttctaaactt gtaggcaaca gtcttaatgt ttccagcagt 3840 ggtgcatctg ttcttacgtt tacccttaat tcctctggtg tgcccaacag tagtgattct 3900 tcattctctg tgggtaccgt tgttgcattg actagggtgc gcgtaacaat cactcgctgc 3960 tctccagaaa ctgcctacct cgcctaattc gattaatgta ctccaaaaat tggcctccct 4020 tattcctacc cgttctcagc cagatctctg ttctggtgtc ctacaggcgt tcatgtcgtg 4080 tgtagtgcgg tctggctaac cgtaacggcg tatcggcttg gatttccaat gattaggctc 4140 caggatgtac gacatagttg aagatggatg gagtttggta gaccaccgct agcaaaatac 4200 actctgtgtg gggcgtgcta gtggatagtc atgtatgtct gagatgggtt ataggccatc 4260 ccgccc 4266 //