ID DQ922678; SV 1; linear; genomic RNA; STD; VRL; 3330 BP. XX AC DQ922678; XX DT 19-SEP-2006 (Rel. 89, Created) DT 31-JUL-2009 (Rel. 101, Last updated, Version 2) XX DE Grapevine fanleaf virus clone Vol57c5 segment RNA2 polyprotein gene, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3330 RX DOI; 10.1007/s10658-006-9096-2. RX AGRICOLA; IND43877386. RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT "Genetic variability within RNA2 of Grapevine fanleaf virus"; RL Eur. J. Plant Pathol. 117(3):307-312(2007). XX RN [2] RP 1-3330 RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT ; RL Submitted (28-AUG-2006) to the INSDC. RL Plant Physiology and Biotechnology, National Institute of Biology, Vecna RL Pot 111, Ljubljana 1000, Slovenia XX DR MD5; 3d6800761c6fc3a186efbc0f371cac9c. XX FH Key Location/Qualifiers FH FT source 1..3330 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cv. Volovnik" FT /isolate="Vol57" FT /mol_type="genomic RNA" FT /country="Slovenia" FT /clone="Vol57c5" FT /db_xref="taxon:12274" FT CDS 1..3330 FT /codon_start=1 FT /product="polyprotein" FT /note="contains homing protein (2A), movement protein (2B) FT and coat protein (2C)" FT /db_xref="GOA:Q09G69" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09G69" FT /protein_id="ABI63942.1" FT /translation="MGKFYYSNRRLACWAAGKNPHLGGSVEQWLLAISTDPSFRQTVKE FT DVQDNRDEPSAIRMFSWKLGYGPIDNPEKCDWHFVLTGERPQQPTEPVKAHEVVVPQPK FT KVVIPSPPPPPTPYFRAVGAFAPTRSGFIRATVERLTREREESRAAALFAELPSEYPQG FT APLKLSLAMKFAMLKHTTWRKWYDTSDERLFEAHPGGPCFPPPPPIQSPPSFQERIREF FT CRMKSCARAFALETSLGLNKAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVST FT SVAPGRAQWVSERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLP FT PLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSA FT VVIDALEIAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGL FT QYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQV FT QGTVLRATMMGNTVVVSPEGGLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQIFSI FT RSRSRSVRVDRNVDLPQLEAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMIS FT DFKGVQYEKWITAGLVMPTFKIVVRLPANAFTGLTWVMSFDAYNRITSRITTSADPVYT FT LSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWLA FT VVELYAELEEATSFLGKPTLVFDPGVFDGKFQYLTCPPIFFDLTAVTALKSAGLTLGQV FT PMVGTIRVYNLNNTLVSCVLGMGGTIKGKVHICAPIFYSIVLWVVSEWNGTTMDWNELF FT RYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPAGETARLP FT VVVQIEEIIRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGEN FT PFAAMIACHGLHSGILDLKLQWSLNTEFGRSSGSVTITKLVGDKAMGLDGPSQVFAIQK FT LEGTTELLIGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSF FT PV" XX SQ Sequence 3330 BP; 822 A; 732 C; 877 G; 899 T; 0 other; atgggcaaat tttactactc caacaggcgt ctggcctgtt gggcagctgg gaagaacccc 60 caccttgggg gttccgtaga acaatggctg ttggccatta gtactgaccc ctccttccgc 120 caaactgtaa aggaggatgt ccaggataat cgggatgagc cttcggctat ccggatgttt 180 tcctggaaat tgggatacgg gcccattgat aacccggaaa aatgcgattg gcattttgtc 240 ctcacgggcg agaggccaca gcagccgacc gagccggtta aagctcatga ggttgtggtg 300 ccacaaccga agaaggtagt gattccctca ccacctcctc ccccaactcc ctactttagg 360 gctgttgggg cttttgcacc aaccaggtcc gggtttattc gggccactgt ggaaagactc 420 acccgggaac gggaagagtc gagagctgcg gcactctttg ccgaattgcc atcggagtat 480 cctcaaggtg ctcctttgaa attgagtctg gcgatgaagt tcgccatgct caaacatacc 540 acttggagga agtggtatga cactagtgat gagcgcctct ttgaggccca tcctggtggt 600 ccttgtttcc ctcctcctcc cccaatccaa agccctccct cttttcagga gaggataagg 660 gagttctgca ggatgaagtc ctgcgccagg gcttttgccc tggaaacctc tctaggtctt 720 aacaaggcct gggtaggttt agtagatatc cccagcactt ctgtgtgctg tgcggatggg 780 agaactaccg gtgggcaaac gattgcccaa gaagctgatc ctttgcaaca tagggtcagc 840 acatctgtgg cccccggtag ggcacaatgg gtctccgagc gcagacaggc tctgcgtagg 900 agagagcagg caaatagcct gcagggcctt gctgctcaga cggacatgac atttgagcag 960 gccaggaatg catatcttgg cgctgctgat atgattgagc aaggcctacc gctgcttccc 1020 cctctacgca gcgcatatgc ccctaggggt ttgtggaggg gaccctctac cagagccaat 1080 tacacattgg attttaggct caatggtatc ccgactggga caaatacatt agaaattttg 1140 tataatcccg tgtcggaaga ggaaatggaa gagtaccggg ataggggcat gtcagccgtg 1200 gtaattgatg cgctagaaat agcgataaat ccatttggca tgcctggtaa tccgacggac 1260 ttaactgttg tggcaacgta cggacatgag cgtgacatga cacgtgcctt tattggttct 1320 gcctccactt tcttgggaaa tgggctggca cgagctattt tctttcctgg cttacaatat 1380 agtcaggagg aaccaaggcg cgaatctata attcgcctat acgttgcttc tactaatgct 1440 actgtagaca ctgattcagt cttggcagcc attagcgttg gcactctgcg tcaacacgtt 1500 ggttccatgc actatcgaac ggtagctagt actgtgcatc aagcccaggt gcaaggtacg 1560 gtactcaggg ccactatgat gggtaatact gttgtagtgt cgcctgaagg aggcctagtt 1620 actgggaccc ctgaagcgag agttgaaata gggggtggtt ctagtatcag gatggtagga 1680 cctctacaat gggagagtgt agaggaacca gggcaaatct tctctatcag aagccgctca 1740 cgatctgtga gagttgatag aaatgttgat cttcctcaac ttgaggctga gcctagattg 1800 agctcaaccg tgagaggatt agcaggtaga ggagtagttt acatccccaa ggattgccag 1860 gcaaacaggt acttaggcac cctgaacata cgtgatatga tttcagattt taagggtgtc 1920 cagtatgaaa aatggataac tgcaggatta gtcatgccta ctttcaagat agttgttagg 1980 ctacctgcaa atgcctttac gggattaacg tgggtaatga gctttgatgc ttacaaccgg 2040 ataactagta gaatcactac tagtgctgat cctgtgtata ccctgtctgt accgcattgg 2100 cttatccatc ataagttagg cacgttttct tgtgagatag attatggaga attgtgtggt 2160 catgcaatgt ggtttaaatc cacaacattt gagtctccaa ggctacattt cacgtgccta 2220 actggcaata ataaagagtt ggcagcagac tggctagctg ttgttgagct ctacgcagaa 2280 ctggaagaag ctacatcctt tcttggaaaa cccaccttgg tttttgaccc gggtgttttt 2340 gatggcaaat ttcagtattt gacttgcccc cccatattct ttgatctaac agccgtcacg 2400 gctcttaaga gtgctgggct gacgttgggc caggttccaa tggttggcac tattagggtt 2460 tacaacctaa acaatactct tgtgagctgt gttttgggta tgggaggtac tattaaagga 2520 aaagtgcaca tttgtgcacc aatcttttat agtattgttt tatgggttgt tagcgagtgg 2580 aacgggacca ccatggactg gaatgaactt ttcagatatc ccggggtgta tgtggaagaa 2640 gatggaagct ttgaagttaa aattcgttct ccatatcacc ggacgcctgc taggttgctt 2700 gctggtcaaa gccagaggga tatgagctct ctgaattttt atgcaatagc agggcccatc 2760 gctccagcgg gtgagactgc gcgacttcct gttgtcgtgc aaattgagga gattattcgc 2820 ccagacctct ccctaccaag ttttgaagac gactattttg tgtgggtaga cttttctgag 2880 tttactcttg ataaggaaga aattgagatt ggatctcgtt tctttgattt tacttcaaat 2940 acttgtaggg tttctatggg agaaaaccca tttgctgcaa tgattgcttg tcatggattg 3000 catagcggta tattagatct caaactccag tggagtctaa ataccgaatt tggcaggagc 3060 agcgggagcg taactattac gaagttggtg ggtgataaag ccatgggctt ggatgggcca 3120 tctcaggttt ttgccataca aaaactggag ggaactacag aattgttgat tgggaatttt 3180 gcaggagcaa atcccaacac tcatttctcc ctctacagtc gatggatggc aattaaactg 3240 gatcaagcaa agagtattaa ggtgctccgt gttttgtgta agcctcgtcc aggtttcagt 3300 ttttatggaa gaaccagctt tccagtctag 3330 //