ID DQ922672; SV 1; linear; genomic RNA; STD; VRL; 3333 BP. XX AC DQ922672; XX DT 19-SEP-2006 (Rel. 89, Created) DT 31-JUL-2009 (Rel. 101, Last updated, Version 2) XX DE Grapevine fanleaf virus clone Vol55c2 segment RNA2 polyprotein gene, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3333 RX DOI; 10.1007/s10658-006-9096-2. RX AGRICOLA; IND43877386. RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT "Genetic variability within RNA2 of Grapevine fanleaf virus"; RL Eur. J. Plant Pathol. 117(3):307-312(2007). XX RN [2] RP 1-3333 RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT ; RL Submitted (28-AUG-2006) to the INSDC. RL Plant Physiology and Biotechnology, National Institute of Biology, Vecna RL Pot 111, Ljubljana 1000, Slovenia XX DR MD5; 86e0ed499ca9b8f414176b0166ff1480. XX FH Key Location/Qualifiers FH FT source 1..3333 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cv. Volovnik" FT /isolate="Vol55" FT /mol_type="genomic RNA" FT /country="Slovenia" FT /clone="Vol55c2" FT /db_xref="taxon:12274" FT CDS 1..3333 FT /codon_start=1 FT /product="polyprotein" FT /note="contains homing protein (2A), movement protein (2B) FT and coat protein (2C)" FT /db_xref="GOA:Q09G74" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09G74" FT /protein_id="ABI63936.1" FT /translation="MGKFYFSNRRLACWAAGKNPHLGGSVEQWLAAISTDPSFRQTVKE FT DVQVNKLQPTAVRMFSWKVGFGPIDNPEKCDWHFVLTGERPTQPSRPVKADEVVVVPQS FT KKVMIPSPPPPPTPYFRAVGAFASTRSGFVRATVERLIREREESRAAALFAELPLEYPQ FT GAPLKLSLAMKFAMLKHTTWRKWYDTSDERLLKAHSGGPCLPPPPPIQSPPSFQERVRE FT FCRMKSCAKAFALETSLGLNKAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVS FT ISVAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLL FT PPLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMS FT AVVVDALEIAINPFGMPGNPTDLTVVATYGHERDMARAFIGSASTFLGNGLARAIFFPG FT LQYSQEEPRRESIIRLYVASTNATVDTDSILAAISVGTLRQHVGSMHYRTVANTVHQAQ FT VQGTTLRATMMGNTVVVSPEGSLVTGTPEAKVEIGGGSSIRMVGPLQWESVEEPGQTFS FT IRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPKDCQANRYLGTLNIRDMI FT SDFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITTSADPVY FT TLSVPHWLIHHKLGTLSCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQ FT AVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALKSAGLTLGQ FT VPMVGTTKVYNLNSTLVSCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNEL FT FKYPGGYVEEDGSFEVKIRSPYHRTPARLLVGQSQRDMSSLNFYVIAGPIAPSGETARL FT PIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFSDFTSRTCRVSMGE FT NPFAAMIACHGLHSGVLDLKFQWSLNTEFGKSSGSVTITKLVGDKATGLDGPSQIFALQ FT KLEGVSELLVGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTS FT FPV" XX SQ Sequence 3333 BP; 806 A; 744 C; 887 G; 896 T; 0 other; atgggcaaat tttatttttc caacaggcgt ctggcctgtt gggctgctgg aaagaacccc 60 catctagggg gttctgtcga acaatggctg gcggccatta gtactgaccc ctccttccgc 120 caaactgtta aggaggatgt ccaggtaaac aaactgcagc ctacggctgt caggatgttt 180 tcctggaaag tgggattcgg gcccattgac aacccggaaa aatgtgattg gcatttcgtc 240 ctcacgggcg agaggccaac acagccgtcc cggccggtta aagccgatga ggttgtggtg 300 gtgccacaat cgaagaaggt gatgattcca tcgccacctc ctcccccaac tccctacttt 360 agggctgttg gggcttttgc atcaacccgg tccgggtttg ttcgggccac tgtggaaagg 420 ctcatccgtg aacgggaaga gtcgagagct gcggcactct ttgccgaatt gccattggag 480 taccctcagg gtgctccttt gaagttgagc ctggcaatga agtttgccat gctcaaacat 540 accacttgga ggaagtggta tgacactagt gatgagcgcc tcttgaaggc tcattctggt 600 ggtccttgtc ttcctcctcc tcccccaatc caaagtcctc cctcttttca agagagggtt 660 agggaattct gtaggatgaa atcctgtgcc aaggcttttg ccttggaaac ctctctgggt 720 ctcaataagg cctgggtggg tttggtagac atccccagca cctctgtgtg ctgtgcggat 780 ggtagaacta ccggtgggca aacgatagct caagaagctg accctttgca acatagggtc 840 agcatatcag tagcccccgg tagggcacaa tggatctccg agcgcagaca ggctctgcga 900 aggagagagc aagcaaatag cttgcagggt cttgctgctc agactgatat gacttttgag 960 caggccagga acgcctatct tggcgctgct gacatgattg agcaaggcct accgctactt 1020 ccccctctgc gcagcgctta tgcccctagg ggcttgtgga ggggaccctc aaccagagcc 1080 aattacacgc ttgatttcag gctcaatggt attccgactg ggacaaacac attggaaata 1140 ttgtacaatc ccgtgtcgga agaagagatg gaagagtacc gggacagagg catgtcggct 1200 gtggtggttg atgcgctaga aatagctata aacccgttcg gcatgcctgg aaatccaacg 1260 gacttgactg tcgtggcaac ttatgggcat gaacgtgata tggcgcgtgc ctttattgga 1320 tctgcttcca cattcttagg gaatgggtta gctagagcca ttttctttcc tggcttgcaa 1380 tatagtcagg aggaaccaag gcgcgaatct ataattcgcc tgtatgttgc ctctactaac 1440 gccactgtgg atactgattc aatcttggcg gccattagtg ttggcacctt gcgtcaacac 1500 gttggctcca tgcactatcg tactgtggca aataccgtgc accaggccca ggtgcaagga 1560 acgacactca gggccactat gatgggtaat actgttgtag tgtcacctga aggaagccta 1620 gtcactggaa cccccgaagc gaaagtcgaa atagggggcg gttcaagtat taggatggtg 1680 ggacctctgc aatgggagag tgtagaggaa ccagggcaaa ctttctctat cagaagtcgc 1740 tcacgttccg tgaggattga tagaaatgtt gatcttcctc aacttgaggc tgagcccaga 1800 ttgagctcaa ccgtgagggg attggctggt agaggagtga tttatattcc caaggattgc 1860 caggcaaata ggtacttggg caccctgaat atacgtgata tgatttcaga tttcaaaggt 1920 gttcagtacg aaaagtggat aactgcagga ctagtcatgc ctacctttaa gatagttatt 1980 aggctacctg ctaatgcttt tactggattg acgtgggtga tgagctttga cgcttataac 2040 cggataacta gtaggattac tactagtgca gatcctgtat acaccttgtc agtcccacat 2100 tggcttatcc accataagtt gggtacgctt tcttgtgagg tggactacgg agagttgtgt 2160 ggtcatgcca tgtggttcaa gtccacaact tttgaatctc cgagactaca ttttacgtgt 2220 ctcactggca acaacaaaga gctggcggca gactggcaag ctgtcgtaga gctatatgct 2280 gaattggaag aagctacttc ttttcttggg aaaccaactt tggtttttga cccaggcgtt 2340 tttaatggca aattccaatt cctgacttgc cctcccatat tctttgatct cacagccgtc 2400 acggctctta agagtgctgg gctgacgttg ggacaagtcc caatggttgg cactaccaag 2460 gtttataatc taaatagcac tcttgtgagt tgtgttctag gaatgggagg tactattagg 2520 ggaagggtgc acatttgtgc gccaatcttc tatagtatag tgctgtgggt tgtgagtgag 2580 tggaacggga ccactatgga ctggaatgaa cttttcaagt atcccggggg gtatgtggaa 2640 gaggacggaa gttttgaagt taaaattcgc tctccatatc accgaacgcc cgctagattg 2700 cttgttggcc aaagtcagag ggacatgagc tctctgaatt tctatgtaat agcgggacct 2760 atcgctcctt cgggtgagac tgcacgactt cctattgttg tgcagatcga tgagattgtg 2820 cgcccagacc tctctttacc aagttttgaa gatgattact tcgtgtgggt agacttttct 2880 gagtttactc tcgacaagga agaaattgag attggttctc gtttctctga tttcacttca 2940 agaacttgta gagtgtctat gggcgaaaac ccatttgctg caatgattgc ttgccatgga 3000 ttacatagtg gtgtcctgga cctcaaattt caatggagtc tgaacactga atttggcaag 3060 agtagcggga gcgttaccat aactaaactg gtgggcgata aagccacggg tctggacggg 3120 ccttcacaga tttttgccct acaaaagcta gagggagttt cagagttgtt ggttgggaat 3180 tttgcaggag caaacccaaa tactcatttt tctctctata gtcgatggat ggcaattaaa 3240 ctggatcaag ctaagagtat taaagtactc cgcgttttat gtaagcctcg tccaggtttt 3300 agtttttatg gaagaaccag tttcccagtc tag 3333 //