ID DQ922670; SV 1; linear; genomic RNA; STD; VRL; 3330 BP. XX AC DQ922670; XX DT 19-SEP-2006 (Rel. 89, Created) DT 31-JUL-2009 (Rel. 101, Last updated, Version 2) XX DE Grapevine fanleaf virus clone Vol54c3 segment RNA2 polyprotein gene, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3330 RX DOI; 10.1007/s10658-006-9096-2. RX AGRICOLA; IND43877386. RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT "Genetic variability within RNA2 of Grapevine fanleaf virus"; RL Eur. J. Plant Pathol. 117(3):307-312(2007). XX RN [2] RP 1-3330 RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT ; RL Submitted (28-AUG-2006) to the INSDC. RL Plant Physiology and Biotechnology, National Institute of Biology, Vecna RL Pot 111, Ljubljana 1000, Slovenia XX DR MD5; e28f88e1f520771e307c47a962062ae5. XX FH Key Location/Qualifiers FH FT source 1..3330 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cv. Volovnik" FT /isolate="Vol54" FT /mol_type="genomic RNA" FT /country="Slovenia" FT /clone="Vol54c3" FT /db_xref="taxon:12274" FT CDS 1..3330 FT /codon_start=1 FT /product="polyprotein" FT /note="contains homing protein (2A), movement protein (2B) FT and coat protein (2C)" FT /db_xref="GOA:Q09G77" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09G77" FT /protein_id="ABI63934.1" FT /translation="MGKFYFSNRRLACWAAGKNPHLGGSVGQWLAAISTDPSFRQTVKE FT DVQDNKLQPTAVRMFSWKVGFGPIDNPEKCDWHFVLTGERPTQPSRPVKADEVVVVPQS FT KKVMIPSPPPPTPYFRAVGAFAPTRSGFVRATVERLIREREESRAAALFAELPLEYPQG FT APLKLSLAMKFAMLKHTTWRKWYDTSDERLLKAHPGGPCLPPPPPIQSPPSFQERVREF FT CRMKSCAKAFALETSLGLNKARVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVSM FT SVAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLP FT PLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSA FT VVVDALEIAINPFGMPGNPTDLTVVATYGHERDMARAFIGSASTFLGNGLARAIFFPGL FT QYSQEEPRRESIIRLYVASTNATVDTDSILAAISVGTLRQHVGSMHYRTVANTVHQAQV FT QGTTLRATMMGNTVVVSPEGSLVTGTPEAKVEIGGGSSIRMVGPLQWESVEEPGRTFSI FT RSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPKDCQANRYLGTLNIRDMIS FT DFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITTSADPVYT FT LSVPHWLIHHKLGTFSCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQA FT VVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALKSAGLTLGQV FT PMVGTTKVYNLNSTLVSCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELF FT KYPGVYVEEDGSFDVKIRSPYHRTPARLLVGQSQRDMSSLNFYAIAGPIAPSGETARLP FT IVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKKEIEIGSRFFDFTSRTCRVSMGEN FT PFAAMIACHGLHSGVLDLKFQWSLNTEFGKSSGSVTITKLVGDKATGLDGPSQIFALQK FT LEGVSELLVGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSF FT PV" XX SQ Sequence 3330 BP; 799 A; 748 C; 891 G; 892 T; 0 other; atgggcaaat tttatttttc caacaggcgt ctggcctgtt gggctgctgg aaagaacccc 60 catctagggg gttctgtcgg acaatggctg gcggccatta gtactgaccc ctccttccgc 120 caaactgtta aggaggatgt ccaggataac aaactgcagc ctacggctgt caggatgttt 180 tcctggaaag tgggattcgg gcccattgac aacccggaaa aatgtgattg gcatttcgtc 240 ctcacgggcg agaggccaac acagccgtcc cggccggtta aagccgatga ggttgtggtg 300 gtgccacaat cgaagaaggt gatgattcca tcgccacctc ctccaactcc ctactttagg 360 gctgttgggg cttttgcacc aacccggtcc gggtttgttc gggccactgt ggaaaggctc 420 atccgtgaac gggaagagtc gagagccgcg gcactctttg ccgaattgcc attggagtac 480 cctcagggtg ctcctttgaa gttgagcctg gcaatgaagt ttgccatgct caaacatacc 540 acttggagga agtggtatga cactagtgat gagcgcctct tgaaggctca tcctggtggt 600 ccttgtcttc ctcctcctcc cccaatccaa agtcctccct cttttcagga gagggttagg 660 gaattctgca ggatgaaatc ctgtgccaag gcttttgcct tggaaacctc tctgggtctc 720 aataaggccc gggtgggttt ggtagacatc cccagcacct ctgtgtgctg tgcggatggt 780 agaactaccg gtgggcaaac gattgctcaa gaagctgacc ctttgcaaca tagggtcagc 840 atgtcagtag cccccggtag ggcacaatgg atctccgagc gcagacaggc tctgcgaagg 900 agagagcaag caaatagctt gcagggtctt gctgctcaga ctgatatgac ttttgagcag 960 gccaggaacg cctatcttgg cgctgctgac atgattgagc aaggcctacc gctacttccc 1020 cctctgcgca gcgcttatgc ccctaggggc ttgtggaggg gaccctcaac cagagccaat 1080 tacacgcttg atttcaggct caatggtatt ccgactggga caaacacatt ggaaatattg 1140 tacaatcccg tgtcggaaga agagatggaa gagtaccggg acagaggcat gtcggctgtg 1200 gtggttgatg cgctagaaat agctataaac ccgttcggca tgcctggaaa tccaacggac 1260 ttgactgtcg tggcaactta tgggcatgaa cgtgatatgg cgcgtgcctt tattggatct 1320 gcttccacat tcttagggaa tgggttagct agagccattt tctttcctgg cttgcaatat 1380 agtcaggagg aaccaaggcg cgaatctata attcgcctgt atgttgcctc tactaacgcc 1440 actgtggata ctgattcaat cttggcggcc attagtgttg gcaccttgcg tcaacacgtt 1500 ggctccatgc actatcgtac tgtggcgaat accgtgcacc aggcccaggt gcaaggaacg 1560 acactcaggg ccactatgat gggtaatact gttgtagtgt cacctgaagg aagcctagtc 1620 actggaaccc ccgaagcgaa agtcgaaata gggggcggtt caagtattag gatggtggga 1680 cctctgcaat gggagagtgt agaggaacca gggcgaactt tctctatcag aagtcgctca 1740 cgttccgtga ggattgatag aaatgttgat cttcctcaac ttgaggctga gcccagattg 1800 agctcaaccg tgaggggatt ggctggtaga ggagtgattt atattcccaa ggattgccag 1860 gcaaataggt acttgggcac cctgaatata cgtgatatga tttcagattt caaaggtgtt 1920 cagtacgaaa agtggataac tgcaggacta gtcatgccta cctttaagat agttattagg 1980 ctacctgcta atgcttttac tggattgacg tgggtgatga gctttgacgc ttataaccgg 2040 ataactagta ggattactac tagtgcagat cctgtataca ccttgtcagt cccacactgg 2100 cttatccacc ataagttggg tacgttttct tgtgaggtgg actacggaga gttgtgtggt 2160 catgccatgt ggttcaagtc cacaactttt gaatctccga gactacattt tacgtgtctc 2220 actggcaaca acaaagagct ggcggcagac tggcaagctg tcgtagagct atatgctgaa 2280 ttggaagaag ctacttcttt tcttgggaaa ccaactttgg tttttgaccc aggcgttttt 2340 aatggcaaat tccaattcct gacttgccct cccatattct ttgatctcac agccgtcacg 2400 gctcttaaga gtgctgggct gacgttggga caagtcccaa tggttggcac taccaaggtt 2460 tataatctaa atagcactct tgtgagttgt gttctaggaa tgggaggtac tattagggga 2520 agggtgcaca tttgtgcgcc aatcttctat agtatagtgc tgtgggttgt gagtgagtgg 2580 aacgggacca ctatggactg gaatgaactt ttcaagtatc ccggggtgta tgtggaagag 2640 gacggaagtt ttgatgttaa aattcgctct ccatatcacc gaacgcccgc tagattgctt 2700 gtcggccaaa gtcagaggga catgagctct ctgaatttct atgcaatagc gggacctatc 2760 gctccttcgg gtgagactgc acgacttcct attgttgtgc agatcgatga gattgtgcgc 2820 ccagacctct ctttaccaag ttttgaagat gattacttcg tgtgggtaga cttttctgag 2880 tttactctcg acaagaaaga aattgagatt ggttctcgtt tctttgattt cacttcaaga 2940 acttgtagag tgtctatggg cgaaaaccca tttgctgcaa tgattgcttg ccatggattg 3000 catagtggtg tcctggacct caaatttcaa tggagtctga acactgaatt tggcaagagt 3060 agcgggagcg ttaccataac taaactggtg ggcgataaag ccacgggtct ggacgggcct 3120 tcacagattt ttgccctaca aaagctagag ggagtttcag agttgttggt tgggaatttt 3180 gcaggagcaa acccaaatac tcatttttct ctctatagcc gatggatggc aattaaactg 3240 gatcaagcta agagtattaa agtactccgc gttttatgta agcctcgtcc aggttttagt 3300 ttttatggaa gaaccagttt cccagtctag 3330 //