ID DQ922669; SV 1; linear; genomic RNA; STD; VRL; 3330 BP. XX AC DQ922669; XX DT 19-SEP-2006 (Rel. 89, Created) DT 31-JUL-2009 (Rel. 101, Last updated, Version 2) XX DE Grapevine fanleaf virus clone Vol54c2 segment RNA2 polyprotein gene, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3330 RX DOI; 10.1007/s10658-006-9096-2. RX AGRICOLA; IND43877386. RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT "Genetic variability within RNA2 of Grapevine fanleaf virus"; RL Eur. J. Plant Pathol. 117(3):307-312(2007). XX RN [2] RP 1-3330 RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT ; RL Submitted (28-AUG-2006) to the INSDC. RL Plant Physiology and Biotechnology, National Institute of Biology, Vecna RL Pot 111, Ljubljana 1000, Slovenia XX DR MD5; 221f238e7398e7e9a2e2df2175380c4d. XX FH Key Location/Qualifiers FH FT source 1..3330 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cv. Volovnik" FT /isolate="Vol54" FT /mol_type="genomic RNA" FT /country="Slovenia" FT /clone="Vol54c2" FT /db_xref="taxon:12274" FT CDS 1..3330 FT /codon_start=1 FT /product="polyprotein" FT /note="contains homing protein (2A), movement protein (2B) FT and coat protein (2C)" FT /db_xref="GOA:Q09G78" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09G78" FT /protein_id="ABI63933.1" FT /translation="MGKFYYSNRRLACWAAGKNPHLGGSIEQWLLAISTDPSFRQTVKG FT DVQDNRDEPSAIRMFSWKLGYGPTDNPEKCDWHFVLTGERPQQPTEPVKAHEVVVPQPK FT KVVIPSPPPPPTPYFRAVGAFAPTRSGFIRATVERLTREREESRAAALFAELPLEYPQG FT APLKLSLAMKFAMLKHTTWRKWYDTSDERLFEAHPGGPCFPPPPLIQSPPSLQERIREF FT CRMKSCARAFALETSLGLNKAWVGLVDIPSTAVCCADGRTTGGQTIAQEADPLQHRVST FT SVAPGRAQWVSERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLP FT PLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYWDRGMSA FT VVIDALEIAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGL FT QYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQA FT QGTVLRATMMGNTVVVSPEGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQIFSI FT RSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMIS FT DFKGVQYEKWITAGLVMPTFKIVVRLPANAFTGLTWVMSFDAYNRITSRITTSADPVYT FT LSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQA FT VVELYAELEEATSFLGKPTLVFDPGVFDGKFQYLTCPPIFFDLTAVTALKSAGLTLGQV FT PMVGTTRVYNLNSTLVSCVLGMGGTNKGKVHICAPIFYSIVLWVVSEWNGTTMDWNELF FT KYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPAGETARLP FT VVVQIEEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGEN FT PFAAMIACHGLHSGILDLKLQWSLNTEFGKSSGSVTITKLVGDKAMGLDGPSQVFAIRK FT LEGTTELLIGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSF FT PV" XX SQ Sequence 3330 BP; 824 A; 734 C; 877 G; 895 T; 0 other; atgggcaaat tttactactc caacaggcgt ctggcctgtt gggcagctgg gaagaacccc 60 caccttgggg gttccataga acaatggctg ttggccatta gtactgaccc ctccttccgc 120 caaactgtaa agggggatgt ccaggataat cgggatgagc cttcggctat ccggatgttt 180 tcctggaaat tgggatacgg gcccactgat aacccggaaa aatgcgactg gcattttgtc 240 ctcacgggcg agaggccaca gcagccgacc gagccggtta aagctcatga ggttgtggtg 300 ccacaaccga agaaggtagt gattccctca ccacctcctc ccccaactcc ctactttagg 360 gctgttgggg cttttgcacc aaccaggtcc gggtttattc gggccactgt ggaaagactc 420 acccgggaac gggaagagtc gagagctgcg gcactctttg ccgaattgcc attggagtat 480 cctcaaggtg ctcctttgaa attgagtctg gcgatgaagt tcgccatgct caaacatacc 540 acttggagga agtggtatga cactagtgat gagcgcctct ttgaggccca tcctggtggt 600 ccttgtttcc ctcctcctcc cctaatccaa agccctccct ctcttcagga gaggataagg 660 gagttctgca ggatgaagtc ctgcgccagg gcttttgccc tggaaacctc tctaggtctt 720 aacaaggcct gggtaggttt agtagatatc cccagcactg ctgtgtgctg tgcggatggg 780 agaactaccg gtgggcaaac gattgctcaa gaagctgatc ctttgcaaca tagggtcagc 840 acatctgtgg cccccggtag ggcacaatgg gtctccgagc gcagacaggc tctgcgtagg 900 agagagcagg caaatagcct gcagggcctt gctgctcaga cagacatgac atttgagcag 960 gccaggaatg catatcttgg cgctgctgat atgattgagc aaggcctacc gctgcttccc 1020 cctctacgca gcgcatatgc ccctaggggt ttgtggaggg gaccctctac cagagccaat 1080 tacacattgg attttaggct caatggtatc ccgactggga caaatacatt agaaattttg 1140 tataatcccg tgtcggaaga ggaaatggaa gagtactggg ataggggtat gtcagccgtg 1200 gtaattgatg cgctagaaat agcgataaat ccatttggca tgcctggtaa tccaacggac 1260 ttaactgttg tggcaacgta cggacatgag cgtgacatga cacgtgcctt tattggttct 1320 gcctccactt tcttgggaaa tgggctggca cgagctattt tctttcctgg cttacaatat 1380 agtcaggagg aaccaaggcg cgaatctata attcgcctat atgttgcttc tactaatgct 1440 actgtagaca ctgattcagt cttggcagcc attagcgttg gcactctgcg tcaacacgtt 1500 ggttccatgc actatcgaac ggtagctagt actgtgcatc aagcccaggc gcaaggtacg 1560 gtactcaggg ccactatgat gggtaatact gttgtagtgt cgcctgaagg aagcctagtt 1620 actgggaccc ctgaagcgag agttgaaata gggggtggtt ctagtatcag gatggtagga 1680 cctctacaat gggagagtgt agaggaacca gggcaaatct tctctatcag aagccgctca 1740 cgatctgtga gaattgatag aaatgttgat cttcctcaac ttgaggccga gcccagattg 1800 agctcaaccg tgagaggatt agctggtaga ggagtagttt acatccccaa ggattgccag 1860 gcaaacaggt acttaggcac cctgaacata cgtgatatga tttcagattt taagggtgtc 1920 cagtatgaaa aatggataac tgcaggatta gtcatgccta ctttcaagat agttgttagg 1980 ctacctgcaa atgcctttac gggattaacg tgggtaatga gctttgatgc ttacaaccgg 2040 ataactagta gaatcactac tagtgctgat cctgtgtata ccctgtctgt accgcattgg 2100 cttatccatc ataagttagg cacgttttct tgtgagatag attatggaga attgtgtggc 2160 catgcaatgt ggtttaaatc cacaacattt gagtctccaa ggctacattt cacgtgccta 2220 actggcaata ataaagagtt ggcagcagac tggcaagctg ttgttgagct ctacgcagaa 2280 ctggaagaag ctacatcctt tcttggaaaa cccaccttgg tttttgaccc gggtgttttt 2340 gatggcaaat ttcagtattt gacttgcccc cccatattct ttgatctaac agccgtcacg 2400 gctcttaaga gtgctgggct gacgttgggc caggttccaa tggttggcac tactagggtt 2460 tacaacctaa acagtactct tgtgagctgt gttttgggta tgggaggtac taataaagga 2520 aaagtgcaca tttgtgcacc aatcttttat agtattgttt tatgggttgt tagcgagtgg 2580 aacgggacca ctatggactg gaatgaactt ttcaaatatc ccggggtgta tgtggaagag 2640 gatggaagct ttgaagttaa aattcgttct ccgtatcacc ggacgcctgc taggttgctt 2700 gctggtcaaa gccagaggga tatgagctct ctgaattttt atgcaatagc agggcccatc 2760 gctccagcgg gtgagactgc gcgacttcct gttgtcgtgc aaattgagga gattgttcgc 2820 ccagacctct ccctaccaag ttttgaagac gactattttg tgtgggtaga cttttctgag 2880 tttactcttg ataaggaaga aattgagatt ggatctcgtt tctttgattt tacttcaaat 2940 acttgtaggg tttctatggg agaaaaccca tttgctgcaa tgattgcttg tcatggattg 3000 catagcggta tattagatct caaactccag tggagtctaa ataccgaatt tggcaagagc 3060 agcgggagcg taactattac gaagttggtg ggtgataaag ccatgggctt ggatgggcca 3120 tctcaggttt ttgccatacg aaaactggag ggaactacag aattgttgat tgggaatttt 3180 gcaggagcaa atcccaacac tcatttctcc ctctacagtc gatggatggc aattaaactg 3240 gatcaagcaa agagtattaa ggtgctccgt gttttgtgta agcctcgtcc aggtttcagt 3300 ttttatggaa gaaccagctt cccagtctag 3330 //