ID DQ922658; SV 1; linear; genomic RNA; STD; VRL; 3333 BP. XX AC DQ922658; XX DT 19-SEP-2006 (Rel. 89, Created) DT 31-JUL-2009 (Rel. 101, Last updated, Version 2) XX DE Grapevine fanleaf virus clone Vol49c1 segment RNA2 polyprotein gene, DE complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3333 RX DOI; 10.1007/s10658-006-9096-2. RX AGRICOLA; IND43877386. RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT "Genetic variability within RNA2 of Grapevine fanleaf virus"; RL Eur. J. Plant Pathol. 117(3):307-312(2007). XX RN [2] RP 1-3333 RA Pompe-Novak M., Gutierrez-Aguirre I., Vojvoda J., Blas M., Tomazic I., RA Vigne E., Fuchs M., Ravnikar M., Petrovic N.; RT ; RL Submitted (28-AUG-2006) to the INSDC. RL Plant Physiology and Biotechnology, National Institute of Biology, Vecna RL Pot 111, Ljubljana 1000, Slovenia XX DR MD5; b81ce49a748caeafd37a60d8c0890388. XX FH Key Location/Qualifiers FH FT source 1..3333 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cv. Volovnik" FT /isolate="Vol49" FT /mol_type="genomic RNA" FT /country="Slovenia" FT /clone="Vol49c1" FT /db_xref="taxon:12274" FT CDS 1..3333 FT /codon_start=1 FT /product="polyprotein" FT /note="contains homing protein (2A), movement protein (2B) FT and coat protein (2C)" FT /db_xref="GOA:Q09G89" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09G89" FT /protein_id="ABI63922.1" FT /translation="MGKFYYSNRRLACWAAGKNPHLGGSIEQWLMAISTDSSFRQTVKE FT DVQENRNEPSAIRMFSWKLGYGPIDNPEKCDWHFVLTGERPTQPSRPVKADEVVVVPQS FT KKVTIPSPPPPPTPYFRAVGAFAPTRSGFVRATVERLTREREESRAAALFAELPLEYPQ FT GAPLKLSLAMKFAMLKHTTWRKWYDTSDERLLKAHPGGPCFPPPPPIQSPPSFQERVRE FT FRRMKSCAKAFALETSLGLNKAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRAS FT TSVAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLL FT PPLRSAYAPRGLWRGPSTRTNYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMS FT AVVVDALEIAINPFGMPGNPTDLTVVATYGHERDMARAFIGSASTFLGNGLARAIFFPG FT LQYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVANTVHQAQ FT VQGTTLRATMMGNTVVVSPEGSLVTGTPEAKVEIGGGSSIRMVGPLQWESVEEPGQTFS FT IRSRSRSVRIDRNVDLPQLEAEPKLSSTVRGLAGRGVIYIPKDCQANRYLGTLNIRDMI FT SDFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITTSADPVY FT TLSVPHWLIHHKLGTFSCEVDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQ FT AVVELYAELEEATSFLGKLTLVFDPGVFSGKFQFLTCPPIFFDLTAVTALKSAGLTLGQ FT VPMVGTTKVYNLNSTLVSCILGMGGTIRGRVHICAPVFYSIVLWVVSEWNGTTMDWNEL FT FKYPGVYVEEDGSFEVKIRSPYHRTPARLLVGQSQRDMSSLNFYAIAGPIAPSGETARL FT PIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSRTCRVSMGE FT NPFAAMIACHGLHSGVLDLKFQWSLNTEFGKSSGSVTITKLVGDKATGLDGPSQIFALQ FT KLEGVSELLVGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTS FT FPV" XX SQ Sequence 3333 BP; 810 A; 752 C; 884 G; 887 T; 0 other; atgggcaaat tttactactc caacaggcgt ctggcctgtt gggcagccgg gaagaacccc 60 caccttgggg gttccataga acaatggctg atggccatta gtactgactc ctccttccgc 120 caaactgtaa aggaggacgt ccaggaaaat cggaatgagc cttcggctat ccggatgttt 180 tcctggaaat tgggatacgg gcccattgac aacccggaaa aatgtgattg gcatttcgtc 240 ctcacgggcg agaggccaac acagccgtcc cggccggtta aagccgatga ggttgtggtg 300 gtgccacaat cgaagaaggt gacgattcca tcgccacctc ctcccccaac tccctacttt 360 agggctgttg gggcttttgc accaacccgg tccgggtttg ttcgggccac tgtggaaagg 420 ctcacccgtg aacgggaaga gtcgagagct gcggcactct ttgccgaatt gccattggag 480 taccctcagg gtgctccttt gaagttgagc ctggcaatga agtttgccat gctcaaacat 540 accacttgga ggaagtggta tgacactagt gatgagcgcc tcttgaaggc tcatcctggt 600 ggtccttgtt ttcctcctcc tcccccaatc caaagtcctc cctcttttca agagagggtt 660 agggaattcc gcaggatgaa atcctgtgcc aaggcttttg ccttggaaac ctctctgggt 720 ctcaataagg cctgggttgg tttggtagac atccccagca cctctgtgtg ctgtgcggat 780 ggtagaacta ccggtgggca aacgattgct caagaagctg accctttgca acatagggcc 840 agcacatcag tagcccccgg tagggcacaa tggatctccg agcgcagaca ggctctgcga 900 aggagagagc aagcaaatag cttgcagggt cttgctgctc agactgatat gacttttgag 960 caggccagga acgcctatct tggcgctgct gacatgattg agcaaggcct accgctactt 1020 ccccctctgc gcagcgctta tgcccctagg ggcttgtgga ggggaccctc aaccagaacc 1080 aattacacgc ttgatttcag gctcaatggt attccgactg ggacaaacac attggaaata 1140 ttgtataatc ccgtgtcgga agaagagatg gaagagtacc gggacagagg catgtcagct 1200 gtggtggttg atgcgctaga aatagctata aacccattcg gcatgcctgg aaatccaacg 1260 gacttgactg tcgtggcaac ttatgggcat gaacgtgata tggcgcgtgc ctttattgga 1320 tctgcttcca cattcttagg gaatgggtta gctagagcca ttttctttcc tggcttgcaa 1380 tatagtcagg aggaaccaag gcgcgaatct ataattcgcc tatatgttgc ctctactaac 1440 gccactgtgg atactgattc agtcttggcg gccattagtg ttggcacctt gcgtcaacac 1500 gttggctcca tgcactatcg tactgtggca aataccgtgc accaggccca ggtgcaagga 1560 acgacactca gggccactat gatgggtaat actgtagtag tgtcacctga aggaagccta 1620 gtcactggaa cccccgaagc gaaagtcgaa atagggggcg gttcaagtat taggatggtg 1680 ggacctctgc aatgggagag tgtagaggaa ccagggcaaa ctttctctat cagaagtcgc 1740 tcacgttccg tgaggattga tagaaatgtt gatcttcctc aacttgaggc tgagcccaaa 1800 ttgagctcaa ccgtgagggg attggctggt agaggagtga tttacattcc caaggattgc 1860 caggcaaata ggtacttggg caccctgaat atacgtgata tgatttcaga tttcaaaggt 1920 gttcagtacg aaaagtggat aactgcagga ctagtcatgc ctacctttaa gatagttatt 1980 aggctacctg ctaatgcttt tactggattg acgtgggtga tgagctttga cgcttataac 2040 cggataacta gtaggattac tactagtgca gatcctgtat acaccttgtc agtcccacat 2100 tggcttatcc accataagtt gggtacgttt tcttgtgagg tggactacgg agagttgtgt 2160 ggtcatgcta tgtggttcaa gtccacaact tttgaatctc cgagactaca ttttacgtgt 2220 ctcactggca acaacaaaga gctggcggcg gactggcaag ctgtcgtaga gctatatgct 2280 gaattggaag aagctacttc ttttcttggg aaactaactt tggtttttga cccaggcgtt 2340 tttagtggca aattccaatt cctgacttgc cctcccatat tctttgatct cacagccgtc 2400 acggctctta agagtgctgg gctgacgttg ggacaagtcc caatggttgg cactaccaag 2460 gtttataatc taaatagcac tcttgtgagt tgtattctag gaatgggagg tactattagg 2520 ggaagggtgc acatttgtgc gccagtcttc tatagtatag tgctgtgggt tgtgagtgag 2580 tggaacggga ccactatgga ctggaatgaa cttttcaagt atcccggggt gtatgtggaa 2640 gaggacggaa gttttgaagt taaaattcgc tctccatatc accgaacgcc cgctagattg 2700 cttgtcggcc aaagtcagag ggacatgagc tctctgaatt tctatgcaat agcgggacct 2760 attgctcctt cgggtgagac tgcacgactc cctattgttg tgcagatcga cgagattgtg 2820 cgcccagacc tctctttacc aagttttgaa gatgattact tcgtgtgggt agacttttct 2880 gagtttactc tcgacaagga agaaattgag attggttctc gtttctttga tttcacttca 2940 agaacttgta gagtgtctat gggagaaaac ccatttgctg caatgattgc ttgccatgga 3000 ttgcatagtg gtgtcctgga cctcaaattt caatggagtc tgaacaccga atttggcaag 3060 agtagcggga gcgttaccat aactaaactg gtgggcgata aagccacggg tctggacggg 3120 ccttcacaga tttttgccct acaaaagcta gagggagttt cggagttgtt ggttgggaat 3180 tttgcaggag caaacccaaa tactcatttt tctctctata gtcgatggat ggcaattaaa 3240 ctggatcaag ctaagagtat taaagtactc cgcgttttat gtaagcctcg tcctggtttt 3300 agtttttatg gaagaaccag tttcccagtc tag 3333 //