ID DQ915948; SV 1; linear; genomic RNA; STD; VRL; 2926 BP. XX AC DQ915948; XX DT 02-OCT-2006 (Rel. 89, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus strain Br20 NSs and N genes, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2926 RA Margaria P., Ciuffo M., Pacifico D., Turina M.; RT "Evidence that NSs protein of Tomato spotted wilt virus is the avirulence RT determinant in the interaction with resistant pepper carrying the TSW RT gene"; RL Unpublished. XX RN [2] RP 1-2926 RA Margaria P., Ciuffo M., Turina M.; RT ; RL Submitted (23-AUG-2006) to the INSDC. RL IVV, CNR, Strada delle Cacce 73, Torino, TO 10135, Italy XX DR MD5; ce10987e2f73253cc760b911f21d6808. XX FH Key Location/Qualifiers FH FT source 1..2926 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /lab_host="pepper" FT /strain="Br20" FT /mol_type="genomic RNA" FT /country="Brazil" FT /collection_date="Jan-2006" FT /db_xref="taxon:3052585" FT CDS 89..1492 FT /codon_start=1 FT /product="NSs" FT /note="nonstructural protein; putative silencing FT suppressor" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q06B65" FT /protein_id="ABI94070.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSQLVQTQ FT LYSDSRSKSSFGYTAKVGDLPCEEEEILSQHVYIPIFDDIDFSINIDNSVLALSVCSNT FT VNANGVKHQGHLKVLSPAQLHSIESIMNRSDITDRFQLQEKDIIPNDKYIEAANKGSLS FT CVKEHTYKIEICYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNSQAFVKASTDSHFKLSLWLRVPKVLKQVSIQKLFKVAGDETNKTFYLSI FT ACIPNHNSVETALNITVICKHQLPIRKCKAPFELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNLELTPGKLDLGERTLNYSEDAYKRKYFLSKT FT LECLPSNTQTMSYLNSIQIPSWKIDFARGEIKISPQSISVAKSLLKLDLSGIKKKESKV FT KEAYASGSK" FT CDS complement(1997..2773) FT /codon_start=1 FT /product="N" FT /note="nucleocapsid" FT /db_xref="GOA:Q06B64" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q06B64" FT /protein_id="ABI94071.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENIDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGGTDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2926 BP; 927 A; 563 C; 468 G; 968 T; 0 other; agagcaattg tgtcagaatt ttgttcataa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctcaact agttcagacc cagctgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa ggtaggggat cttccctgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta gcatcaatat 360 tgataactct gttctggcac tatctgtttg ctcaaataca gtcaatgcta acggagtgaa 420 acatcaaggt catttgaagg ttttgtctcc tgcccagctc cactctattg aatctatcat 480 gaacagatct gatattacag accgattcca gctccaagaa aaagacataa ttcccaatga 540 caaatacatt gaagctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagata tgctataatc aggctttagg caaagtgaat gttctatctc ctaacagaaa 660 tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtaaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taactctcaa gcttttgtca aagcttccac tgattctcat ttcaagctga gcctctggct 840 aagggttcca aaggttttga agcaggtttc cattcagaaa ttgttcaagg ttgcaggaga 900 tgaaacaaac aaaacatttt atttatctat tgcctgcatt ccaaaccata acagtgttga 960 gacagcttta aacattactg ttatttgcaa gcatcagctc ccaattcgca aatgcaaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 cccttcatac ccccaaagga tcgttcatgc tctgctcgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttgc aagaagatgt aatcatctac actttgaaca accttgagct 1200 aactcctgga aagttagatt taggtgaaag aaccttgaat tacagtgaag atgcctacaa 1260 gaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttacttaaac agcatccaaa tcccttcatg gaagatagac tttgccagag gagaaattaa 1380 aatttctcca caatctattt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaagg ttaaggaagc gtatgcttca ggatcaaaat aatcttgctt 1500 tgtccagctt tttctaatta tgttatgttt attttctttc tttacttata attatttctc 1560 tgtttgtcat ctctttcaaa ttcctcctgt ctagtagaaa ccataaaaac aaaaaataaa 1620 aatgaaaata aaattaaaat aaaataaaat caaaaaatga aataaaaaca acaaaaaatt 1680 aaaaaacaaa aaaccaaaaa agatcccgaa agggacaatt tggccaaatt tgggttttgt 1740 ttttgttttt tgttttttgt tttttatttt ttattttatt tttattttat tttattttta 1800 ttttattttt attttattta ttttttgttt tcgttgtttt tgttatttta ttatttatta 1860 agcacaacac acagaaagca aactttaatt aaacacactt atttaaaatt taacacacta 1920 agcaagcaca agcaataaag ataaagaaag ctttatatat ttataggctt ttttataatt 1980 taacttacag cttctttcaa gcaagttctg cgagttttgc ctgcttttta accccgaaca 2040 tttcatagaa cttgttaaga gtttcactgt aatgttccat agcaacactc cctttagcat 2100 taggattgct ggagctaagt atagcagcat actctttccc cttcttcacc tgatcttcat 2160 tcatttcaaa tgctttgctt ttcagcacag tgcaaacttt tcctaaggct tccttggtgt 2220 catacttctt tgggtcgatc ccgaggtcct tgtattttgc atcctgatat atagccaaga 2280 caacactgat catctcaaag ctatcaactg aagcaataag aggtaagcta cctcccagca 2340 ttatggcaag tctcacagac tttgcatcat cgagaggtaa tccataggct tgaatcaaag 2400 ggtgggaagc aatcttagat ttgatagtat tgagattctc agaattccca gtttcttcaa 2460 caagcctgac cctgatcaag ctatcaagcc ttctgaaggt catgtcagtg cctccaatcc 2520 tgtctgaagt tttctttatg gtaattttac caaaagtaaa atcgctttgc ttaataacct 2580 tcattatgct ctgacgattc tttaggaatg tcagacatga aataacgctc atcttcttga 2640 tctggtcgat gttttccaga caaaaagtct tgaagttgaa tgctaccaga ttctgatctt 2700 cctcaaactc aaggtctttg ccttgtgtca acaaagcaac aatgctttcc ttagtgagct 2760 taaccttaga catgatgatc gtaaaagttg ttatatgctt tgaccgtatg taactcaagg 2820 tgcgaaagtg caactctgta tcccgcagtc gtttcttagg ttcttaatgt gatgatttgt 2880 aagactgagt gttaaggtat gaacacaaaa ttgacacgat tgctct 2926 //