ID   DQ885940; SV 1; linear; genomic RNA; STD; VRL; 1313 BP.
XX
AC   DQ885940;
XX
DT   11-DEC-2006 (Rel. 90, Created)
DT   24-JUN-2007 (Rel. 92, Last updated, Version 2)
XX
DE   Cowpea mild mottle virus isolate Barreiras coat protein (ORF5) and putative
DE   nucleic acid binding protein (ORF6) genes, complete cds.
XX
KW   .
XX
OS   Cowpea mild mottle virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1313
RA   Belintani P., Gaspar J.O., Almeida A.M.R., Kitajima E.W.;
RT   "Characterization of the 3'-terminus of Cowpea mild mottle virus isolated
RT   from soybean in Brazil";
RL   Unpublished.
XX
RN   [2]
RP   1-1313
RA   Belintani P., Gaspar J.O., Almeida A.M.R., Kitajima E.W.;
RT   ;
RL   Submitted (04-AUG-2006) to the INSDC.
RL   Zoologia e Botanica, Instituto de Biociencias, Letras e Ciencias Exatas,
RL   Rua Cristovao Colombo 2265, Sao Jose do Rio Preto, SP 15054 000, Brazil
XX
DR   MD5; 7124079321393b9c982b95c47ad8b7f8.
DR   EuropePMC; PMC3528291; 23242372.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1313
FT                   /organism="Cowpea mild mottle virus"
FT                   /host="soybean"
FT                   /isolate="Barreiras"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:67761"
FT   gene            15..881
FT                   /gene="ORF5"
FT   CDS             15..881
FT                   /codon_start=1
FT                   /gene="ORF5"
FT                   /product="coat protein"
FT                   /db_xref="GOA:A1BY90"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:A1BY90"
FT                   /protein_id="ABL09850.1"
FT                   /translation="MESVFDLNKLVDSEMAEKAKTGVPKAADGTALPDIDAELQKRLDD
FT                   LRAFLRKTQSASEITNPGFELGRPALKESTFNSDKHTHIYGKWSIDQLSRIVPKKISNN
FT                   MATAEEMAKVQITLEGLGVPTEQGAEVLLQVAIYCKDVSSSSFMDSSGTFDWKGGSILS
FT                   DSVIAALRKDDNTLRRVCRLYAPITWNFMLTHKAPPSDWAAMGFKYDDRFAAFDCFEYV
FT                   ENPAAIQPAEGLIRKPTPSEKIAHNTYKRLALDRSNRNELYSNLNTEVTGGTLGPEISR
FT                   NFNHAKK"
FT   gene            884..1231
FT                   /gene="ORF6"
FT   CDS             884..1231
FT                   /codon_start=1
FT                   /gene="ORF6"
FT                   /product="putative nucleic acid binding protein"
FT                   /note="11K"
FT                   /db_xref="GOA:A1BY91"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:A1BY91"
FT                   /protein_id="ABL09851.1"
FT                   /translation="MISCKLIAIHVYLVSRSLGYALPFELCVLISVKAGPARLGTGTGT
FT                   SSYARKRRSKIIGRCHLCYRVNPKFYFTKRCNGVDCKPGLNYPRWVEDFIRYGVYSKGS
FT                   NRGDTPQILNS"
XX
SQ   Sequence 1313 BP; 388 A; 248 C; 310 G; 367 T; 0 other;
     attactctta ggttatggag tcagtatttg atttgaataa gttggtggat agtgagatgg        60
     cagagaaagc aaaaactggc gttccaaagg cagctgatgg tacagctcta cctgatatag       120
     atgcggagct gcagaaaaga ttggatgatt tgagagcatt cctgaggaaa actcaaagcg       180
     cgtctgagat aaccaatcct ggttttgaac tcgggaggcc tgcattgaag gagtccactt       240
     tcaattctga taaacatact cacatctatg gaaagtggtc aattgaccaa ctaagcagaa       300
     tagtcccaaa aaagatatca aacaacatgg ccacagctga ggaaatggct aaggttcaga       360
     taactctaga aggattagga gtacctactg agcaaggtgc tgaggtcctt ttgcaagttg       420
     ccatttactg taaagatgtt agctcctcta gttttatgga ttcaagtggc acttttgact       480
     ggaaaggtgg gtctatactc tcagattcag ttattgctgc cctaaggaag gacgacaata       540
     ctcttcgtag agtttgtcgg ttatatgctc caataacatg gaatttcatg ctaactcaca       600
     aggctccacc ttctgattgg gcagccatgg gcttcaaata cgatgatcga tttgccgcgt       660
     ttgattgttt tgagtatgtt gagaaccccg ctgccataca gcctgctgag gggttaataa       720
     ggaagccgac acccagtgag aagattgcac acaacacata caaaaggttg gctttggata       780
     ggtcaaacag gaatgagctc tattccaatt taaatactga agtaactggg ggtacactag       840
     gacctgaaat atcccgcaat tttaaccacg ctaaaaagtg agaatgataa gctgcaaact       900
     aattgccatc cacgtgtatc tagttagtag aagtctaggt tatgcattgc catttgagtt       960
     gtgtgtttta attagtgtca aagctggtcc cgccaggttg ggcactggca ctggcacctc      1020
     ttcctatgca aggaagagga gatccaaaat aattggtcgt tgtcatctgt gttacagagt      1080
     caatcccaaa ttctacttta ccaagcgttg taatggtgtg gattgtaaac ccggtttgaa      1140
     ttaccctcgt tgggttgaag attttatacg ctatggcgtt tattctaagg ggagtaaccg      1200
     aggtgatacc cctcaaatat taaactcttg aaccaaggaa agagtataaa gagtgccttg      1260
     tgcatcttca gacctaactg ttgagatgag aaccggtttt aaagttattt tcc             1313
//