ID   DQ883816; SV 1; linear; genomic RNA; STD; VRL; 1314 BP.
XX
AC   DQ883816;
XX
DT   06-SEP-2006 (Rel. 89, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Plum pox virus strain D isolate NY 1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1314
RX   DOI; 10.1094/PDIS-91-11-1512C.
RX   AGRICOLA; IND44034844.
RA   Snover-Clift K.L., Clement P.A., Jablonski R., Mungari R.J.,
RA   Mavrodieva V.A., Negi S., Levy L.;
RT   "First Report of Plum pox virus on Plum in New York State";
RL   Plant Dis. 91(11):1512-1512(2007).
XX
RN   [2]
RP   1-1314
RA   Mavrodieva V.A., Negi S.S., Levy L.;
RT   ;
RL   Submitted (02-AUG-2006) to the INSDC.
RL   National Plant Germplasm and Biotechnology Laboratory, USDA-APHIS, PPQ,
RL   CPHST, Bldg. 580, BARC-East, Powder Mill Rd., Beltsville, MD 20705, USA
XX
DR   MD5; 653cdff18c0520ecc58a38a54d87e57e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1314
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica"
FT                   /strain="D"
FT                   /isolate="NY 1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:NY"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1104
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="partial nuclear inclusion body (NIb) and coat
FT                   protein (CP)"
FT                   /db_xref="GOA:Q0GA79"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q0GA79"
FT                   /protein_id="ABI34909.1"
FT                   /translation="PESFPDTEASGTEIERYLEAFYNDINDDGESNVVVHQADEXEDEE
FT                   EIDAGKPIVVTAPAATSPILQPPPVIQPAPRTTVPMFNPIFTPATTQPAIKPVSQVSGP
FT                   QLQTFGTHGNEDASPSYSNALVNTNRDRDVDAGSIGTFTVPRLKAMTSKLSLPKVKGKA
FT                   IMNLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDYDVTDDEMSIILNGLMVWCIEN
FT                   GTSPNINGMWVMMDGETQVEYPVKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYM
FT                   PRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLDGNVG
FT                   TQEEDTERHTAGDVNRNMHNLLGVRGV"
FT   mat_peptide     <1..111
FT                   /product="nuclear inclusion body protein"
FT   mat_peptide     112..1101
FT                   /product="coat protein"
FT   3'UTR           1105..1314
XX
SQ   Sequence 1314 BP; 392 A; 288 C; 302 G; 329 T; 3 other;
     cctgagagct ttcctgacac tgaagcgtct gggacagaaa ttgagcgata tcttgaagct        60
     ttttacaacg acattaacga tgatggtgag tccaacgttg ttgtgcacca agctgacgaa       120
     raagaagacg aggaggaaat tgatgcaggc aagccaattg tagttactgc accggcagca       180
     actagcccaa tacttcaacc acctccagtc atacagcctg caccccggac tacggtgcca       240
     atgttcaacc ccattttcac accagcaaca actcaaccag caataaaacc agtttcacag       300
     gtgtcaggac ctcaactgca aacttttgga acacatggta atgaggatgc ctcacctagc       360
     tactcaaacg cgctagtcaa cacaaacaga gacagggacg tcgatgcagg atcaattgga       420
     actttcacag tgccacgttt gaaggcaatg acttcgaaac tatctctgcc aaaggtgaag       480
     ggaaaggcca ttatgaacyt gaaccatttg gcacattata gtcctgcaca ggttgacttg       540
     tcaaacacga gagctccgca gtcttgtttc caaacttggt atgaaggagt taagcgagat       600
     tatgatgtca cggacgatga aatgagcatc attttaaatg gtcttatggt ttggtgcata       660
     gagaatggaa catccccgaa tatcaatgga atgtgggtga tgatggatgg ggaaacacaa       720
     gtggagtatc cagtaaagcc attgttggat catgcgaaac ccacttttag acaaattatg       780
     gcacatttca gtaacgtggc tgaagcgtat attgaaaaac gaaattatga aaaagcatac       840
     atgccaaggt atggaattca gcgcaacctg acagactaca gcctcgccag atatgccttt       900
     gatttttacg aaatgacttc aacaacaccc gtacgggcac gtgaagctca tatccagatg       960
     aaggcagcag cattgagaaa tgttcaaaat cgtttatttg gcttggatgg aaacgtcgga      1020
     acacaagaag aggacacaga gagacacacc gctggtgatg ttaatcgcaa catgcacaac      1080
     ctcctcggtg tgaggggagt gtagtggtct cggtatctat cataaactct acctgggtga      1140
     gagtctagtc atccagttgt ttttagattc ctgttagcat ccttttctcc gctttaatag      1200
     cagtacattc agtgaggttt tacctccata tgttctagtc tgttattgtc gaacacaggc      1260
     ccttgtatct gatgagcsag gtgcttcact ccattcgggt tatagttctt gtgc            1314
//