ID DQ866135; SV 1; linear; genomic DNA; STD; VRL; 2734 BP. XX AC DQ866135; XX DT 19-SEP-2006 (Rel. 89, Created) DT 27-DEC-2006 (Rel. 90, Last updated, Version 2) XX DE Squash leaf curl Philippines virus isolate PA1 segment DNA A, complete DE sequence. XX KW . XX OS Squash leaf curl Philippines virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2734 RA Tsai W.S., Green S.K., Shih S.L.; RT "Molecular Identification of Taiwan Ageratum-Infecting Begomoviruses"; RL Unpublished. XX RN [2] RP 1-2734 RA Tsai W.S., Green S.K., Shih S.L.; RT ; RL Submitted (24-JUL-2006) to the INSDC. RL Virology Unit, AVRDC-The World Vegetable Center, PO BOX 42, Shanhua, RL Tainan, Taiwan 74199, ROC XX DR MD5; f56f9eae9676d938283c933b0999607c. XX FH Key Location/Qualifiers FH FT source 1..2734 FT /organism="Squash leaf curl Philippines virus" FT /segment="DNA A" FT /host="pumpkin" FT /isolate="PA1" FT /mol_type="genomic DNA" FT /country="Taiwan:Tainan" FT /db_xref="taxon:269277" FT gene 121..459 FT /gene="AV2" FT CDS 121..459 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /db_xref="GOA:Q09M20" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q09M20" FT /protein_id="ABI63457.1" FT /translation="MWDPLMHDFPESVHGLRCMLAVKYLQEVEKTYSPDTVGYDLVRDL FT ILVLRAKNYVEATSRYYHFNTRVEGTPTSQLRQPLCFPCSCPHCPRHKGKGLDKQADEQ FT KTQDVQDV" FT gene 281..1051 FT /gene="AV1" FT CDS 281..1051 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="capsid protein" FT /db_xref="GOA:Q09M19" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q09M19" FT /protein_id="ABI63458.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAVVPIARVTKGKAWT FT NRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPTGTPQDFGDVFNMFDNEP FT STATVKNMHRDRYQVLRKWLATVTGGTYASREQALVRKFVRVNSYIVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1048..1458) FT /gene="AC3" FT CDS complement(1048..1458) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:Q09M18" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q09M18" FT /protein_id="ABI63459.1" FT /translation="MITDSRTGEYITADRAESGVYIWDVPNPLYFKIMKHDIRPCLEEH FT DIIKVHIMFNHNLRKALGLHKCVLMFQIWTGLRPPIGIFLRVFKTQVLKYLEMLGVIGI FT NNVIRAVYHVLDNVLEKTIDVWTTYDVKLNIY" FT gene complement(1193..1597) FT /gene="AC2" FT CDS complement(1193..1597) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:Q09M17" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q09M17" FT /protein_id="ABI63460.1" FT /translation="MQSSSNSKNHSIPVAKESLPQKKKTNIRRRRIDLPCGCSYYMSIN FT CHDHGFTHRGVHHCGSSREWRVYLGRSKSPLFQNNETRHQTVPRRTRHNQSAHHVQPQP FT AESTGTSQMCSNVPNLDGLTPADWDFLESL" FT gene complement(1500..2585) FT /gene="AC1" FT CDS complement(1500..2585) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:Q09M16" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q09M16" FT /protein_id="ABI63461.1" FT /translation="MAPPKRFRIQAKNYFLTYPKCSLTKKEALSQLQTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFVCTNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGEFQVDGRSARGGQQSANDTAAKALNSGSTEAALAIIREELPKDFIFQYH FT NIKSNLDKIFAPPLEVYVSPFSIASFDQVPQELVDWVSGNVVCSAARPIRPIGIVLEGD FT SRTGKTAWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNPGPNSSYKEYLDEDKNAALKQWALKNAIFIKLEEPL FT YSGRERIATAEEENEHQAQTD" FT gene complement(2135..2428) FT /gene="AC4" FT CDS complement(2171..2428) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q09M15" FT /protein_id="ABI63462.1" FT /translation="MGLRISTFLSSSKESSSARITDSSTWCPQVGQHISIRTFRELNRA FT PTSSPISTRMETPSNGENSRSTAEVLEAVSSLLTTLPQRH" XX SQ Sequence 2734 BP; 737 A; 579 C; 607 G; 811 T; 0 other; accggatggc cgcgcttttt tttttaggtg ggccctcgac caatgaaatt cactccacat 60 gaattattta ttacatgggg accattaaat agacttccgc accaagtttt gctccacaac 120 atgtgggatc cacttatgca cgatttccct gaaagtgttc atggtctaag gtgcatgcta 180 gctgtgaaat atcttcagga ggtggaaaaa acatattctc cggacacagt cggctacgat 240 cttgttcgcg atcttattct agttcttcgc gcaaagaact atgtcgaagc gaccagccga 300 tattatcatt tcaacacccg cgtcgaaggt acgccgacgt ctcaacttcg acagccccta 360 tgtttcccgt gcagttgtcc ccattgcccg cgtcacaaag ggaaaggcct ggacaaacag 420 gccgatgaac agaaaaccca agatgtacag gatgtataga agtccggacg tgccaagggg 480 ctgtgaaggc ccttgtaaag ttcaatcgtt cgaatctagg cacgatgtct ctcatattgg 540 gaaggtaatg tgtatcagcg atgttacacg aggaaccgga ctcacacatc gcgttgggaa 600 gcgattttgt gtgaaatctg tttatgtttt gggaaagata tggatggatg aaaatatcaa 660 gactaaaaat catactaata gtgtcatatt ttttctggtt cgagaccgtc gtcctacagg 720 gactcctcag gattttgggg acgtttttaa tatgttcgat aatgaaccga gcactgcaac 780 ggtgaagaac atgcatcgtg atcgatacca agtgctgcgc aaatggcttg ccactgtgac 840 tggaggaaca tacgcatcaa gggagcaagc attagttagg aagtttgtta gagtcaatag 900 ttatattgtc tacaaccaac aagaggccgg caagtatgag aatcatactg aaaatgcatt 960 aatgttgtat atggcctgta ctcatgcatc gaaccctgta tacgcgactt tgaaaattcg 1020 gatctatttt tatgattcgg taacaaatta atatatattc aatttcacat catacgttgt 1080 ccatacatca atcgtctttt ccaatacatt gtccagaaca tgataaacgg ctcttattac 1140 attgttaata ccaatcaccc ctaacatttc caagtactta aggacttggg ttttaaagac 1200 tctcaagaaa atcccaatcg gcgggcgtaa gcccgtccag atttggaaca ttagaacaca 1260 tttgtgaagt cccagtgctt tccgcaggtt gtggttgaac atgatgtgca ctttgattat 1320 gtcgtgttct tctaggcacg gtctgatgtc gtgtttcatt attttgaaat agaggggatt 1380 tggaacgtcc cagatataca cgccactctc tgctcgatcc gcagtgatgt actcccctgt 1440 gcgtgaatcc gtgatcatgg caatttattg acatgtaata cgagcatccg cacggtagat 1500 caatccgtct gcgcctgatg ttcgttttct tcttctgcgg tagcgattct ttcgcgaccg 1560 gaatagagtg gttcttcgag tttgatgaag attgcattct ttaatgccca ctgttttagt 1620 gctgcattct tatcttcatc gagatactct ttataactgc tgtttggtcc cggattgcag 1680 aggaagatgg tgggaattcc acctttaatc atgactggct ttccgtactt cgtgttactt 1740 tgccagtctc tttgggcccc catgaattct ttaaaatgct ttaaatagtg gggatctacg 1800 tcatcaatga cgttgtacca agcatcatta ctgtatacct ttggacttaa gtccaagtgg 1860 ccgcacaagt aattgtgtgg tcccaaagaa cgcgcccacg cagttttgcc cgttctacta 1920 tcaccctcta aaactattcc tatgggtcta attggccgcg cagcggaaca caccacgtta 1980 cctgaaaccc aatcgacgag ttcttgcgga acttgatcga aggatgcaat cgaaaaagga 2040 gaaacataca cctctaaagg aggtgcaaat atcttatcta aattactttt aatattatgg 2100 tattgaaaga taaaatcttt cgggagttct tctctaatta ttgctaaagc tgcttcggtt 2160 gaacctgaat ttaatgcctt tgcggcagtg tcgttagcag actgctgacc gcctctagca 2220 cttctgccgt cgacctggaa ttctccccat tcgatggtgt ctccatcctt gtcgatatag 2280 gacttgacgt cggagctcga tttagctccc tgaatgttcg gatggaaatg tgctgaccga 2340 cttggggaca ccaagtcgaa gaatctgtta ttcgtgcaga cgaactttcc ttcgaactgg 2400 ataagaacgt ggatatgcgg agacccatct tcgtgtagtt ctctgcaaat tttgataaat 2460 ttcttcgaag ttggagtttc tagggtttgt aattgggaaa gtgcctcttt tttagtaaga 2520 gagcacttgg gataagtaag gaaataattt ttggcttgta ttctaaaacg ctttggaggt 2580 gccatgtcag cagaaatgaa ttggagacaa ccaaacttgc gaaatgaatt ggagacagga 2640 gcacaatata tagtgtgtct ctaaatggca ttttggtaat tctcaaatga aacctcaaat 2700 tttgaattgg taaagcggcc atccgtataa tatt 2734 //