ID   DQ854959; SV 1; linear; genomic RNA; STD; VRL; 1237 BP.
XX
AC   DQ854959;
XX
DT   17-AUG-2006 (Rel. 88, Created)
DT   20-MAY-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Chilli veinal mottle virus isolate SKh5 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Chilli veinal mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1237
RX   DOI; 10.1111/j.1365-3059.2007.01780.x.
RX   AGRICOLA; IND44057038.
RA   Tsai W.S., Huang Y.C., Zhang D.Y., Reddy K., Hidayat S.H., Srithongchai W.,
RA   Green S.K., Jan F.J.;
RT   "Molecular characterization of the CP gene and 3'UTR of Chilli veinal
RT   mottle virus from South and Southeast Asia";
RL   Plant Pathol. 57(3):408-416(2008).
XX
RN   [2]
RP   1-1237
RA   Tsai W.S., Green S.K., Huang Y.C., Zhang D., Reddy K., Hidayat S.H.,
RA   Srithongchai W.;
RT   ;
RL   Submitted (15-JUL-2006) to the INSDC.
RL   Virology unit, AVRDC-The World Vegetable Center, P.O. Box 42, Shanhua,
RL   Tainan, Taiwan 74199, R. O. C.
XX
DR   MD5; 0f71facd5689dfe454675b8d5d308331.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1237
FT                   /organism="Chilli veinal mottle virus"
FT                   /isolate="SKh5"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand:Songkhla"
FT                   /db_xref="taxon:52280"
FT   CDS             <1..962
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /db_xref="GOA:Q0MS12"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q0MS12"
FT                   /protein_id="ABH12134.1"
FT                   /translation="HGESDISPYLRALIEGAKEEGLDDEGGEVTHQSGESVDAGRVKGE
FT                   DSSSKPADKQATEKKSKVSGQAQPQSRQSEMEVPQVRDRDVNVGTSGTFTIPRLKGISS
FT                   KLTIPRIKTKVVVNLEHLLDYAPEQIHLSNTRALQSQFASWYEGVKNDYDVTDEQMQIV
FT                   LNGLMVWCIENGTSPNINGYWVMMDGDEQVEYPIKPLIDHAKPSFRQIMAHFSNLAEAY
FT                   IEKRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKTPVRAREAHIQMKAAALRGAS
FT                   NRMFGLDGRVGTQEEDTERHTAEDVNRNMHNLLGVRGL"
FT   3'UTR           963..>1237
XX
SQ   Sequence 1237 BP; 387 A; 219 C; 294 G; 337 T; 0 other;
     agcatggaga gagcgacatt agtccatact taagagcact cattgaaggg gccaaggagg        60
     aaggattaga tgacgaaggt ggggaggtta cccaccaatc gggagagagt gttgatgctg       120
     gaagagttaa gggtgaagac tcatcgagta aaccagctga caaacaagcc acagagaaga       180
     agagcaaggt gagtggacaa gctcagccac agtctcgtca gagtgaaatg gaagtacccc       240
     aagtccgaga cagagatgtt aatgttggaa cctcagggac atttacaata ccgcgtctca       300
     agggtatttc ttcgaagtta acaataccaa ggattaaaac aaaggttgtt gttaaccttg       360
     aacaccttct tgattatgcc cctgagcaaa tacatttgag taatacaagg gcattacaat       420
     cacaatttgc atcctggtat gaaggtgtta agaatgacta tgatgtcaca gatgaacaga       480
     tgcaaatagt actgaatgga ttgatggttt ggtgtattga gaatggaacg tcaccaaata       540
     tcaatggtta ttgggttatg atggatggag atgaacaagt tgaatatcca ataaagccat       600
     tgattgatca tgccaaacca tcatttagac aaatcatggc gcattttagc aatcttgctg       660
     aagcgtacat tgagaagcgc aattctgaga agccttatat gccaagatat gggcttcaac       720
     gaaaccttac cgatatgtca ttagcgcgat atgctttcga tttctatgaa atgacatcga       780
     aaactcccgt tcgagctcgt gaagcacaca ttcaaatgaa agcagctgca ttacgcggtg       840
     ctagcaacag gatgttcgga ctggacggta gggtaggcac acaggaagag gacaccgaac       900
     gacatacagc agaggatgta aatagaaata tgcacaactt gctgggtgtt cggggattat       960
     gatccgtttc aacttttaac tagtagtgga caatatattg tagtatatgt aacttggttt      1020
     atgttatgaa tcatgcatat tcttcagtgt ggtttccacc ataagttatg tgtgcttcgt      1080
     ttcatactac tttatatata tattgtttag tactctttat ctaagtagct gtgtatcccc      1140
     gcccattcag tgtggcttcc acccctttat ggagaatggt gcaacaaaga ctattgttat      1200
     gattcatgca ggtgattcta tgaatcgttg aattgtt                               1237
//