Dbfetch

Dbfetch

ID   DQ854951; SV 1; linear; genomic RNA; STD; VRL; 1247 BP.
XX
AC   DQ854951;
XX
DT   17-AUG-2006 (Rel. 88, Created)
DT   20-MAY-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Chilli veinal mottle virus isolate China2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Chilli veinal mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1247
RX   DOI; 10.1111/j.1365-3059.2007.01780.x.
RX   AGRICOLA; IND44057038.
RA   Tsai W.S., Huang Y.C., Zhang D.Y., Reddy K., Hidayat S.H., Srithongchai W.,
RA   Green S.K., Jan F.J.;
RT   "Molecular characterization of the CP gene and 3'UTR of Chilli veinal
RT   mottle virus from South and Southeast Asia";
RL   Plant Pathol. 57(3):408-416(2008).
XX
RN   [2]
RP   1-1247
RA   Tsai W.S., Green S.K., Huang Y.C., Zhang D., Reddy K., Hidayat S.H.,
RA   Srithongchai W.;
RT   ;
RL   Submitted (15-JUL-2006) to the INSDC.
RL   Virology unit, AVRDC-The World Vegetable Center, P.O. Box 42, Shanhua,
RL   Tainan, Taiwan 74199, R. O. C.
XX
DR   MD5; f18eeb784877eeb192a63ca9e702e9e6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1247
FT                   /organism="Chilli veinal mottle virus"
FT                   /isolate="China2"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hainan"
FT                   /db_xref="taxon:52280"
FT   CDS             <1..962
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /note="contains coat protein"
FT                   /db_xref="GOA:Q0MS20"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q0MS20"
FT                   /protein_id="ABH12126.1"
FT                   /translation="HGESDISPYLRALIEGAKEEGLDDEGGEVAHQSGESVDAGRVKGE
FT                   DSSSKPADKQTTEKKNKMGGQAQSHVRQSEMEVPQVRDRDVNVGTSGTFTIPRLKGISS
FT                   KLTIPKIKTKAVVNLEHLLDYAPEQIHLSNTRALQSQFASWYEGVKNDYDVTDEQMQII
FT                   LNGLMVWCIENGTSPNINGYWVMMDGDEQVEYPIKPLIDHAKPSFRQIMAHFSNLAEAY
FT                   IEKRNSEKPYMPRYGLQRNLTDMSLARYAFDFYEMTSKPPVRAREAHIQMKAAALRGVN
FT                   NRMFGLDGRVGTQEEDTERHTAEDVNRNMHNLLGVRGL"
XX
SQ   Sequence 1247 BP; 395 A; 223 C; 297 G; 332 T; 0 other;
     agcatggaga gagcgacatt agtccatatt tgagagcact cattgaaggg gccaaggaag        60
     aaggattaga tgacgagggt ggggaggttg cccatcagtc gggagagagt gttgatgctg       120
     gaagagttaa gggtgaagac tcatcgagta aaccagctga caaacaaaca acagagaaga       180
     agaataagat gggtggacaa gctcagtcac atgttcgcca aagtgagatg gaagtacccc       240
     aagttcgaga cagagacgtt aatgttggaa cctcgggaac attcacaata ccacgtctta       300
     aaggtatttc ttcgaagtta acaataccaa aaatcaaaac aaaggctgtt gttaatcttg       360
     aacaccttct tgattatgcc cctgaacaaa tacatttgag taacacaagg gcattacaat       420
     cacagtttgc atcctggtat gaaggtgtca agaatgacta tgatgtcaca gatgaacaga       480
     tgcaaataat attaaacgga ttgatggttt ggtgtattga gaatgggacg tcaccaaaca       540
     ttaatggtta ttgggttatg atggatggag atgagcaagt tgagtatccg ataaaaccat       600
     taattgatca tgctaaacca tcatttagac aaatcatggc acactttagc aaccttgctg       660
     aagcgtacat tgagaagcgc aactctgaga agccatatat gccaagatat gggcttcaaa       720
     gaaaccttac cgatatgtca ttagcgcgat atgctttcga tttctatgaa atgacatcga       780
     aacctcccgt tcgagctcga gaagcacaca ttcagatgaa ggcagccgca ttacgtggtg       840
     tcaacaacag gatgttcgga ctggacggta gggtaggaac acaggaggag gacaccgaac       900
     gccacacagc agaggatgtg aatagaaata tgcacaactt gctgggtgtt cgtggattgt       960
     aacatcttca gcttttaact agtaataagt aacatattgt agtatatgta acttggttta      1020
     tgttgtcaat catgcatatt cttcagtgtg gttcccacca taagttatgt atgcttggtt      1080
     tcatactact ttatatatat gttatttagt actctttatc taggtaactg tgtacccccg      1140
     cccattctag cgtggttccc accttaatag aatggagcaa caaagactat tgttatggtt      1200
     tatggaggtg actctgtggg tcggtaaact gttcaatagt tggcgtt                    1247
//