ID   DQ845074; SV 1; circular; genomic DNA; STD; VRL; 2035 BP.
XX
AC   DQ845074;
XX
DT   02-OCT-2006 (Rel. 89, Created)
DT   05-AUG-2007 (Rel. 92, Last updated, Version 2)
XX
DE   Gull circovirus, complete genome.
XX
KW   .
XX
OS   Gull circovirus
OC   Viruses; Circoviridae; Circovirus.
XX
RN   [1]
RP   1-2035
RX   DOI; 10.1080/03079450601113654.
RX   PUBMED; 17364513.
RA   Todd D., Scott A.N., Fringuelli E., Shivraprasad H.L., Gavier-Widen D.,
RA   Smyth J.A.;
RT   "Molecular characterization of novel circoviruses from finch and gull";
RL   Avian Pathol. 36(1):75-81(2007).
XX
RN   [2]
RP   1-2035
RA   Todd D., Scott A.N.J., Fringuelli E.;
RT   ;
RL   Submitted (11-JUL-2006) to the INSDC.
RL   Department of Agriculture and Rural Development for Northern Ireland,
RL   Veterinary Sciences Division, Stoney Road, Stormont, Belfast BT4 3SD, UK
XX
DR   MD5; 87844c228d3e552473b042282992ec24.
DR   EuropePMC; PMC2812408; 20007276.
DR   EuropePMC; PMC3133700; 21177928.
DR   EuropePMC; PMC3647419; 23628223.
DR   EuropePMC; PMC5165205; 27795441.
DR   EuropePMC; PMC6160883; 30078831.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2035
FT                   /organism="Gull circovirus"
FT                   /host="gull"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:400121"
FT   gene            100..1017
FT                   /gene="rep"
FT   CDS             100..1017
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:Q06J78"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:Q06J78"
FT                   /protein_id="ABI54254.1"
FT                   /translation="MRRRPRSGRYLRSIMAARRDSGARRWCFTLNNYTPEEEETARNLI
FT                   HDADKYAFAIIGKEVGESGTPHLQGFMHFKQKQRLTALKKLFPRAHFEKARGSDQQNAD
FT                   YCGKDGEILTMIGTPSDNNPSDLAGAVAAVKRGSQMSEIAREFSEVYVKYGRGLRDLRL
FT                   LIGCPPRDFKTEVIVLIGPPGCGKSKLANEMEGSKFYKMKGDWWDGYDNQDIVIIDDFY
FT                   GWLPYCECLRLCDRYPHRVPVKGAYVEFTSKKIVFTSNRHVDGWWKGEIEKSAFYRRIN
FT                   VYKFYETGEFKDMPGHMLPHPINY"
FT   CDS             complement(790..1209)
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /note="ORF C2"
FT                   /db_xref="UniProtKB/TrEMBL:Q06J77"
FT                   /protein_id="ABI54256.1"
FT                   /translation="MLLDLFNKDSILNSKQVVSSLRATRVGRRQSRAPLALRSLRELRD
FT                   SGARDENDCHPEGGVFISRLIIDWVREHVSGHVLEFTSLIKLVHIDPSVEGTLLNFTFP
FT                   PPIHMAIAGKHNLLAGEFHVGTFHRHTVRVPVTQT"
FT   gene            complement(1190..1927)
FT                   /gene="cap"
FT   CDS             complement(1190..1927)
FT                   /codon_start=1
FT                   /transl_except=(pos:1925..1927,aa:Met)
FT                   /gene="cap"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q06J76"
FT                   /db_xref="InterPro:IPR003383"
FT                   /db_xref="InterPro:IPR038652"
FT                   /db_xref="UniProtKB/TrEMBL:Q06J76"
FT                   /protein_id="ABI54255.1"
FT                   /translation="MRRRHRLPRNRRGHRLNRIYLFRFRRQFTVDFPSKTDPQKWASDF
FT                   FTFNLNDFIGQEGIPAAWPFEDYRINLAKVVLRPEGVTTTIARGWGYTVPVQDARVKDL
FT                   KLQDQTQDPLANWDGARAWNLVRGFKRLVRPKPQLTISDMTASNFSASMWLNSSRSGWL
FT                   PLQMPAGTQRDGTRVVHYGLAFSWPSPGQALRYIAEITIYVTFRQFAQIMLKKSEEDLS
FT                   KFGDCLTITDNEKDIDWNVVGSL"
XX
SQ   Sequence 2035 BP; 478 A; 506 C; 532 G; 519 T; 0 other;
     accggcgggc cggggccatg gggccatctg gcccctggcc aagcatgcgc agtagtggcg        60
     catgcgcaat ggccgcgcag cggcctttat ttgcggagca tgcgcagaag gccgcgcagc       120
     ggccgctatt tgcgaagcat catggcagca cggcgagaca gcggagcccg tcgctggtgc       180
     tttactctga ataactacac tcccgaggaa gaggagaccg ctcgcaatct gattcatgat       240
     gcagataagt acgcgtttgc gataatcggc aaagaagttg gcgaaagcgg tactcctcat       300
     ctgcaaggct tcatgcattt taagcaaaag cagcggctta ccgctctaaa gaaacttttt       360
     cctcgcgcgc attttgagaa agctcgcggc agtgatcagc agaatgctga ttattgtggt       420
     aaagacggcg aaatacttac catgatcggt actccgagtg ataataatcc gagtgatctt       480
     gcgggagctg ttgccgctgt gaaacgcgga agtcaaatga gtgaaatcgc gcgagagttc       540
     agtgaagtct acgtcaagta tgggcggggc ctccgtgatc tccggttgct gattggttgc       600
     ccgccccgcg atttcaaaac agaagtcatc gttctgattg gcccacctgg ctgtggcaag       660
     tcaaaattgg ccaatgagat ggaagggtct aagttctaca agatgaaagg tgattggtgg       720
     gatggttatg acaatcaaga tattgtcata atcgatgact tctacggttg gctgccgtac       780
     tgtgagtgcc tacgtctgtg tgaccggtac cctcaccgtg tgcctgtgaa aggtgcctac       840
     gtggaattca ccagcaagaa gattgtgttt accagcaatc gccatgtgga tgggtggtgg       900
     aaaggtgaaa ttgagaagag tgccttctac cgacggatca atgtgtacaa gttttatgag       960
     actggtgaat tcaaggacat gcccggacac atgctcccgc acccaatcaa ttattaggcg      1020
     cgagatgaaa acacccccct cgggatgaca gtcgttttca tctcgcgccc ccgagtcgcg      1080
     gagttcgcga agcgaacgga gcgcgagtgg cgcgcgagat tgtcgacgac cgacgcgcgt      1140
     agcgcggagg gaggagacca cttgctttga atttaatatg ctatctttat taaagagatc      1200
     caacaacatt ccagtctatg tctttttcat tgtcagtaat tgttaagcag tccccgaact      1260
     ttgacaggtc ttcttcagat ttcttcaaca ttatctgagc gaactgcctg aatgttacat      1320
     atatagttat ttctgcaata tatctcagtg cctgtccagg tgaaggccaa gagaatgcca      1380
     gcccgtagtg cactactctt gtaccgtccc tctgggtccc tgctggcatt tgtaaaggta      1440
     accagcctga tctactgcta ttcagccaca ttgatgctga aaagttagag gctgtcatat      1500
     ctgatatggt tagttgaggc tttgggcgta ccagcctctt aaaccctctg accaagttcc      1560
     acgccctcgc cccgtcccag ttagccagtg ggtcttgcgt ttgatcctgt aattttaaat      1620
     ctttaactct ggcgtcctga actgggactg tgtaccccca gccccttgca attgttgttg      1680
     tgacaccttc aggcctcagc accactttag ctaaatttat cctgtaatcc tcgaacggcc      1740
     atgctgccgg tattccctct tgacctataa agtcattcag gttgaaggtg aagaaatctg      1800
     aggcccactt ttgtgggtca gtcttggatg ggaagtccac tgtgaattgc cgtctaaatc      1860
     tgaacaagta tattctgttc agtctgtgcc ctcttcggtt cctgggcaac ctgtgacgtc      1920
     tgcgcactcg tctgtgaaac cgccttctcc ggaaaccgcg agtaacacgc ctccttctgg      1980
     ttgctgagcg acgtacctaa aaatagaatg gccccacggc ccgccgtata gtatt           2035
//