Dbfetch

Dbfetch

ID   DQ841554; SV 1; linear; genomic RNA; STD; VRL; 861 BP.
XX
AC   DQ841554;
XX
DT   13-AUG-2006 (Rel. 88, Created)
DT   27-OCT-2006 (Rel. 89, Last updated, Version 2)
XX
DE   Leek yellow stripe virus coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-861
RX   DOI; 10.1094/PD-90-1458A.
RX   AGRICOLA; IND43898335.
RA   Perez-Moreno L., Cordova-Rosales Z., Barboza-Corona E., Ramirez-Malagon R.,
RA   Ramirez-Lua J., Ruiz-Castro S., Silva-Rosales L.;
RT   "First Report of Leek yellow stripe virus in Garlic in the State of
RT   Guanajuato, Mexico";
RL   Plant Dis. 90(11):1458-1458(2006).
XX
RN   [2]
RP   1-861
RA   Silva-Rosales L., Ramirez-Lua J., Ruiz-Castro S., Barboza-Corona E.,
RA   Perez-Moreno L.;
RT   ;
RL   Submitted (10-JUL-2006) to the INSDC.
RL   Genetic Engineering, Cinvestav Campus Guanajuato, Carretera Irapuato-Leon,
RL   Irapuato, GTO 36500, Mexico
XX
DR   MD5; f061df8104b90a0ea4b1ca5b8196400f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..861
FT                   /organism="Leek yellow stripe virus"
FT                   /host="garlic"
FT                   /mol_type="genomic RNA"
FT                   /country="Mexico"
FT                   /isolation_source="infected leaf"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:42004"
FT   gene            <1..861
FT                   /gene="CP"
FT   CDS             <1..861
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="structural protein"
FT                   /db_xref="GOA:Q0MVN9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q0MVN9"
FT                   /protein_id="ABH09758.1"
FT                   /translation="AGEELDAGMSANKNHKSGADKTNEQRSPSTSQTGIQTGVGSLELN
FT                   TNKDRDVNVGTTGTFSVPRIKQIPQKGMAIPMEGGKSLLNLDHLLQYKPSQLCISNTRA
FT                   TRMQFNNWMERVQEEYGVTKSEMSIILNGLMVWCIENGTSPNINGVWTMMDGDEQVEYP
FT                   LRPIVEHAKPTLRQIMAHFSALAEAYIEMRNSEQAYMPRYGLQRNLTDMGLARYAFDFY
FT                   EVTSRTPVRAREALAQMKAAALRSSRPRLFGLDGNVTTTDEDTERHTAHDVNARMHHLD
FT                   GAHMQ"
XX
SQ   Sequence 861 BP; 295 A; 171 C; 214 G; 181 T; 0 other;
     gctggtgaag agttggatgc aggaatgtca gcaaataaga accataaaag tggtgcggat        60
     aagaccaacg agcaacgaag cccatcaacg tcacaaactg gcattcagac cggtgtggga       120
     agtttggaat tgaacacaaa taaagatagg gatgtgaatg ttggtaccac aggaaccttt       180
     agcgtgccac gaataaaaca aataccacaa aagggaatgg caatccccat ggaaggggga       240
     aagtcgttac tcaacttaga tcacctgtta caatataaac caagtcaatt gtgcatatca       300
     aacactagag cgacgcgaat gcaattcaat aattggatgg aaagagtaca ggaagaatat       360
     ggtgttacaa agagtgaaat gagcatcatt ttgaacggtt taatggtttg gtgcattgaa       420
     aacggaacgt caccaaacat aaacggagta tggacgatga tggatggcga tgagcaggtt       480
     gaatatcctc tacggcctat cgtcgagcac gcaaaaccaa ctctacgtca aataatggcg       540
     catttctcag cactagctga agcttatatt gagatgagga attcagaaca agcttatatg       600
     ccaagatatg gcctacaaag aaacttaaca gacatgggtc tcgcacgcta cgcatttgac       660
     ttttacgaag tcacgtcaag aacaccagtt agagcgcgtg aagctcttgc acaaatgaaa       720
     gcagcggcct tgcgtagttc aaggccaaga ttgtttggac tagacggcaa cgtcacaacc       780
     acggatgagg acacggagag gcacacagca catgacgtga atgcacgtat gcaccatctt       840
     gatggtgcgc atatgcagtg a                                                 861
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