ID DQ785470; SV 1; linear; genomic RNA; STD; VRL; 3045 BP. XX AC DQ785470; XX DT 29-JUL-2006 (Rel. 88, Created) DT 17-AUG-2007 (Rel. 92, Last updated, Version 2) XX DE Cucumber mosaic virus clone pCb7RNA2 segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3045 RX DOI; 10.1099/vir.0.82927-0. RX PUBMED; 17698672. RA Du Z.Y., Chen F.F., Liao Q.S., Zhang H.R., Chen Y.F., Chen J.S.; RT "2b ORFs encoded by subgroup IB strains of cucumber mosaic virus induce RT differential virulence on Nicotiana species"; RL J. Gen. Virol. 88(Pt 9):2596-2604(2007). XX RN [2] RP 1-3045 RA Du Z., Chen J., Liao Q., Zhang H.; RT ; RL Submitted (17-JUN-2006) to the INSDC. RL Institute of Bioengineering, Zhejiang Sci-Tech University, No.2 Road RL Xiasha, Hangzhou, Zhejiang 310018, P.R.China XX DR MD5; 77ae2903ce1345a8a80123db026e16ee. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3045 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="tomato" FT /lab_host="Nicotiana glutinosa" FT /isolate="Cb7-CMV" FT /mol_type="genomic RNA" FT /country="China" FT /clone="pCb7RNA2" FT /note="subgroup: IB" FT /db_xref="taxon:12305" FT 5'UTR 1..78 FT CDS 79..2655 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="ORF2a" FT /db_xref="GOA:Q0PP56" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q0PP56" FT /protein_id="ABG79771.1" FT /translation="MAFPAPAFSLANLLNGTYGVDTPEEVERVRSEQHEEAAAACRNYK FT PLPAVDVSESVTEDAHSLRTPDGAPSEEVSGEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPSTSNRTMKCFEDLVAAIYTKSDFYYDDER FT EADDVQINISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVAIPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLATSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMSGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELRIERSSFTKQRKKKDGIERRRSDKRRTPTSSYGGGEETETKVSQEEST FT GTMLQKSQREGALKSQAVTLPTVLSSRWFGTDRDVPPRECGGIVRA" FT CDS 2414..2749 FT /codon_start=1 FT /product="2b protein" FT /note="ORF2b" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q0PP55" FT /protein_id="ABG79772.1" FT /translation="MELNAGAATNVELQLARMVEAKRQRRRSHKKNRRERCYKSPSERA FT RSNLRLLRFLPFYQVDGSELIEMYRHVNVAELSEPEAPCFTLPAEDDHDFDDTDWFAGN FT EWAEGAF" FT 3'UTR 2750..3035 XX SQ Sequence 3045 BP; 752 A; 683 C; 725 G; 885 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagacttt 60 ctagtttctt tctttcctat ggctttcccc gcccccgctt tctcattagc caatcttttg 120 aatggtactt acggtgtcga cactcccgag gaagtggaac gtgtgcgatc tgagcaacac 180 gaagaggctg ctgcggcttg tcgtaattac aagcccctac ccgctgtgga tgtcagcgag 240 agtgtcacag aggatgcgca ttccctccga accccagacg gggctccctc cgaagaggtg 300 tctggtgagt ttgttactta tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtatcg gacagttatg gtgccctgcg 420 tttaataaat gttcttttat ttccagcatt gctatggcta gagctttgct attggcacct 480 agcacatcca accgaaccat gaagtgtttt gaagacctgg tcgcggctat ttacactaaa 540 tccgatttct attacgatga tgagcgtgaa gccgatgacg ttcagataaa tatctcgtct 600 cgcgatgtac ccggttattc tttcgaaccg tggtcccgaa cgtctggatt tgaaccaccg 660 cctatctgtg aggcgtgtga catgatcatg taccagtgcc cgtgttttga ttttaatgct 720 ttaaagaaat cgtgcgctga gaggactttc gctgacgatt atgttattga aggtttagat 780 ggtgttgttg acaacgcaac tttgttgtct aatttgggcc cgtttttggt gcctgtgaag 840 tgtcaatatg agaaatgtcc aacacccact gtcgcgattc ctccgagttt aaatcgtgct 900 actgatcgtg ttgatattaa tttggttcaa tccatttgtg actccactct gcccacgcat 960 agcaattatg acgattcttt tcatcaagtg ttcgtcgaaa gtgcagatta ttctattgat 1020 ctggatcatg ttagacttcg tcagtctgat ctcattgcaa aaattccaga ttcagggcat 1080 atgataccgg ttttgaatac cgggagtggt cacaagagag taggtacaac gaaggaggtc 1140 cttacagcaa tcaagaaacg taatgctgac gttccagagc taggtgattc cgttaatctg 1200 tccaggttga gtaaggctgt agctgagagg ttcttcattt catacatcaa tggtaactct 1260 ctagcaacca gcaactttgt caatgtcgtt agtaacttcc acgattacat ggaaaaatgg 1320 aagtcttcag gcctctcgta tgatgatctt ccggatctgc atgccgagaa cttgcagttt 1380 tatgatcaca tgataaaatc tgatgtgaag cctgttgtta gcgacacact gaacattgac 1440 agaccggttc cagctactat aacgtatcat aagaaaggta taacctccca gttctcaccg 1500 ttatttacag ctctgtttga gcgtttccag agatgccttc gagaacgtat tattcttcct 1560 gttggaaaga tttcatccct tgagatgtca ggatttgatg ttaagaacaa acattgtctc 1620 gagatcgatt tgtccaaatt cgacaagtct caaggtgaat ttcatttgat gatccaggaa 1680 cacattttga atggtctagg gtgcccggct ccgataacta agtggtggtg cgatttccac 1740 cgattctctt acatcagaga ccgtagagcc ggtgttggta tgcccatcag ttttcagaga 1800 cgaactggtg acgcatttac ttattttggt aacaccatcg tcaccatggc tgaattcgca 1860 tggtgttatg acaccgacca attcgaaaaa cttttattct caggcgatga ttctctagga 1920 ttttcagtgc ttccccctgt tggtgatccg agtaaattca cgactctttt caacatggaa 1980 gctaaggtga tggagccagc agtaccatat atctgttcga agttcttact ctctgacgag 2040 ttcggtaaca ctttttccgt tccagatcca ttgcgcgagg ttcagcggtt aggaacaaag 2100 aagatcccct attctgacaa tgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgtatcg atcagctttc actcttcttt 2220 gagttgaaat acaggaagtc cggggcggag gctgccttaa tgctaggcgc ctttaagaaa 2280 tataccgcta attttcaatc ctataaggaa ctctactatt cagatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg tgtagagttg aggattgagc gttcgagttt cactaagcag 2400 cgaaagaaga aagatggaat tgaacgcagg cgcagcgaca aacgtcgaac tccaactagc 2460 tcgtatggtg gaggcgaaga gacagagacg aaggtctcac aagaagaatc gacgggaacg 2520 atgttacaaa agtcccagcg agagggcgcg ctcaaatctc aggctgttac gcttcctacc 2580 gttctatcaa gtagatggtt cggaactgat agagatgtac cgccacgtga atgtggcgga 2640 attgtccgag cctgaggccc cttgttttac gttaccagcg gaagatgacc atgatttcga 2700 cgatacagat tggttcgctg gtaatgagtg ggcggaaggg gcgttttgaa cctccccctt 2760 cctttctccc tccggttttc tgaggcggga gctgagttgg cggtattgct acaaaccgtc 2820 tgaagtcact aaacgtatta cggtgaacgg gttgtccatc cagctaacgg ctaaaatggt 2880 cagtcgtgga gaaatccacg ccggagactt acaagtctct gagacacctt tgaaaccgtc 2940 tcctgggttt cttcggaagg acttcggtcc gtgcacttct agcacaacgt gctagtttag 3000 ggtgcgggtg tcccccgctc tgcggggctc tccaaaagga gacca 3045 //