ID   DQ777747; SV 1; linear; genomic RNA; STD; VRL; 2219 BP.
XX
AC   DQ777747;
XX
DT   30-JUN-2008 (Rel. 96, Created)
DT   30-JUN-2008 (Rel. 96, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate Ca-P1 segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2219
RA   Lee M.Y., Lee J.H., Ahn H.I., Her N.H., Choi J.K., Harn C.H., Ryu K.H.;
RT   "Identification and Sequence Analysis of RNA3 of a Resistance-Breaking
RT   Isolate of Cucumber mosaic virus from Capsicum annuum";
RL   Unpublished.
XX
RN   [2]
RP   1-2219
RA   Lee M.Y., Lee J.H., Ahn H.I., Her N.H., Choi J.K., Harn C.H., Ryu K.H.;
RT   ;
RL   Submitted (13-JUN-2006) to the INSDC.
RL   Division of Environmental & Life Sciences, Seoul Women's University,
RL   Kongnung-2-dong, Nowon-Ku, Seoul 139-774, Korea
XX
DR   MD5; 50502c26aad3cedf6ae771b887740099.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2219
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum annuum"
FT                   /isolate="Ca-P1"
FT                   /mol_type="genomic RNA"
FT                   /note="acronym: CMV"
FT                   /db_xref="taxon:12305"
FT   gene            123..962
FT                   /gene="MP"
FT   CDS             123..962
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:B3RFW5"
FT                   /protein_id="ABG89137.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKTAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIVSFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYVGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIEASQYVLTDSKINQNARSESEELNVESPPAAIGSSSASRFETFRPQVVNGL"
FT   gene            1258..1911
FT                   /gene="CP"
FT   CDS             1258..1911
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B3RFW6"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:B3RFW6"
FT                   /protein_id="ABG89138.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LATGRPTINHPTCGSERCKPGYTFTSITLKPPKIDKGFYYGKRLLLPDSVTEFDKKLVS
FT                   RIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQANN
FT                   KLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2219 BP; 526 A; 522 C; 527 G; 644 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgcg tcgtgtcgtg tcgtgttgtc        60
     cgcacatttg agtcgtgccg tccgcacctc ttttcttttc agtgtgttag aatacccgag       120
     gcatggcttt ccaaggtacc agcaggactt taactcaaca gtcctcagcg gctacgtctg       180
     acgaacttca aaagatatta tttagccctg aagccattaa gaaaacggct gctgagtgtg       240
     acctaggccg gcatcattgg atgcgagctg ataatgctat ttcagtccgg cccctcgttc       300
     ccgaagtaac ccacggtcgc attgtttctt tctttaagtc tgggtatgat gctggtgaat       360
     tgtgctctaa aggatatatg agcgtccctc aagtgttgtg tgctgttact cgaacagttt       420
     ctaccgatgc tgaagggtcc ttgagaattt acctagctga cttaggcgac aaggaactat       480
     ctcccataga taagcaatgt gtcacattac ataaccatga tctccccgct ttagtgtctt       540
     tccaaccgac gtatgattgt cctatggaga cagttgggaa tcggaagcgg tgttttgctg       600
     tcgttatcga gagacatggt tacgttgggt ataccggcac cacagctagc gtgtgtagta       660
     attggcaagc acggttttct tctaagaata acaactacac tcatatcgca gctgggaaga       720
     ctctagtact gccattcaat agattagctg agcaaacgaa accgtcagcc gtcgctcgcc       780
     tattgaagtc gcaattgaat aacatagaag cttcgcaata cgttttgacg gattcgaaga       840
     tcaatcagaa tgcgcgcagt gagtccgagg aattaaatgt tgagagccct cccgccgcaa       900
     tcgggagttc ttccgcgtcc cgcttcgaaa ccttcagacc gcaggtggtt aacggtcttt       960
     agattttcgt cgcgtattag tatataagta tgtgtgagtt tttacataat actatatcta      1020
     tagtgtcctg tgtgagttga tacagtagac aactgtgacg cgatgtcgtg ttgagaagag      1080
     aacacatctg gttctagtaa gccacatcat tagttttgag gttcaattcc tcttactccc      1140
     tgttgtgccc cttacttttt catggatgct tctccacgaa attgcgtttc gtctactaga      1200
     tcaaggagtg tttgtgttgt gattttctct ttgtgttgta gatatttgag tcgagtcatg      1260
     gacaaatctg aatcaaccag tgctggtcgt aaccgtcggc gtcgtccgcg tcgtggttcc      1320
     cgctccgctt cctcctccgc ggatgctaac tttagagtct tgtcgcagca actttcgcga      1380
     cttaacaaga cattagcaac tggtcgtcca actattaacc acccaacttg tggtagtgag      1440
     cgttgtaaac ctggatacac gttcacctcg attaccctga agccaccaaa gatagacaaa      1500
     ggattctact atggcaaaag gttgttactt cctgattcag tcacagagtt cgataagaag      1560
     cttgtttcgc gcattcaaat tcgagttaat cctttgccga aatttgattc taccgtgtgg      1620
     gtgacagtcc gcaaagttcc tgcctcatcg gacttatccg ttaccgccat ctctgctatg      1680
     ttcgcggacg gagcctcacc ggtactggtt tatcagtatg cagcatccgg agtccaagcc      1740
     aacaataaat tgttgtatga tctttcggcg atgcgcgctg atattggtga catgagaaag      1800
     tacgccgtgc tcgtgtattc aaaagacgat gcgctcgaga cggacgaatt ggtacttcat      1860
     gttgacattg agcaccaacg cattcccaca tctggggtgc tcccagtttg aacctgtgtt      1920
     ttccagaacc ctccctccga tttctgtggc gggagctgag ttggtagtgt tgctataaac      1980
     tacctgaagt cactaaacgc tatgcggtga acgggttgtc catccagctt acggctaaaa      2040
     tggtcagtcg tggagaaatc cacgccagca gacttacaag tctctgaggt gcccttgaaa      2100
     ccatctccta ggtttcttcg gaaggacttc ggtccgtgta cttctagcac aagatgctag      2160
     tttagagtac gggcatcccc cattttttaa atggggtctc caaaaggaga ccactgcag       2219
//