Dbfetch

Dbfetch

ID   DQ777271; SV 1; linear; viral cRNA; STD; VRL; 777 BP.
XX
AC   DQ777271;
XX
DT   01-AUG-2006 (Rel. 88, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   Tomato spotted wilt virus isolate NC-14 clone 3 nucleocapsid (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-777
RA   Tsompana M., Carbone I., Abad J., Moyer J.W.;
RT   "Recombination, genetic drift and mutation in the genesis and evolution of
RT   tomato spotted wilt virus";
RL   Unpublished.
XX
RN   [2]
RP   1-777
RA   Tsompana M., Carbone I., Abad J., Moyer J.W.;
RT   ;
RL   Submitted (12-JUN-2006) to the INSDC.
RL   Plant Pathology, North Carolina State University, 2518 Gardner Hall, Box
RL   7616, Raleigh, NC 27695-7616, USA
XX
DR   MD5; ebf275e5debbe7e4a107cc08ff6e8954.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..777
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /isolate="NC-14"
FT                   /mol_type="viral cRNA"
FT                   /collection_date="2002"
FT                   /clone="3"
FT                   /db_xref="taxon:3052585"
FT   gene            1..777
FT                   /gene="N"
FT   CDS             1..777
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:Q0PT07"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q0PT07"
FT                   /protein_id="ABG90040.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLGNLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMTEDQVKKGKEYAAILSSS
FT                   NPNAKGSVAMEHYSEALNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 777 BP; 251 A; 131 C; 177 G; 218 T; 0 other;
     atgtctaagg ttaagctcac taaggaaagt attgttgctt tgttgacaca aggcaaagac        60
     cttgagtttg aggaagatca gaatctggta gcattcaatt tcaagacttt ttgtctagga       120
     aaccttgacc agatcaaaaa gatgagcatt atttcatgtc tgacattcct gaagaatcgt       180
     cagagcataa tgaaggttat taagcaaagt gattttactt ttggtaaaat taccataaag       240
     aaaacttcag acaggattgg agccactgac atgaccttca gaaggcttga tagcttgatc       300
     agggtcaggc ttgttgagga aactgggaat tctgagaatc tcaatactat caaatctaag       360
     attgcttccc accctttgat tcaagcctat ggattacctc ttgatgatgc aaagtctgtg       420
     aggcttgcca taatgctagg aggtagctta cctcttattg cttcagttga tagctttgag       480
     atgatcagtg ttgtcttggc tatataccag gatgcaaaat acaaggacct cgggattgac       540
     ccaaagaagt atgacaccag ggaagcctta gggaaagttt gcactgtgct gaaaagcaaa       600
     gcatttgaaa tgactgaaga tcaggtgaag aaggggaaag agtatgctgc tatacttagt       660
     tccagcaatc ctaatgctaa aggaagtgtt gctatggaac attacagtga agctcttaac       720
     aagttctatg aaatgtttgg agttaaaaaa caggcaaaac tcgcagaact tgcttga          777
//