ID   DQ680130; SV 1; linear; genomic RNA; STD; VRL; 748 BP.
XX
AC   DQ680130;
XX
DT   27-SEP-2006 (Rel. 89, Created)
DT   23-JAN-2007 (Rel. 90, Last updated, Version 4)
XX
DE   Barley yellow dwarf virus - MAV isolate MAV39P5o2003 coat protein gene,
DE   partial cds; and 17k probable movement protein (MP) gene, complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus MAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-748
RX   DOI; 10.1007/s00705-006-0846-4.
RX   PUBMED; 17013543.
RA   Robertson N.L., French R.;
RT   "Genetic analysis of a novel Alaska barley yellow dwarf virus in the family
RT   Luteoviridae";
RL   Arch. Virol. 152(2):369-382(2007).
XX
RN   [2]
RP   1-748
RA   Robertson N.L., French R.;
RT   ;
RL   Submitted (08-JUN-2006) to the INSDC.
RL   Arctic Plant Germplasm Research and Introduction, United States Dept. of
RL   Agriculture, Agricultural Research Service, 533 E. Fireweed Ave., Palmer,
RL   AK 99645, USA
XX
DR   MD5; 27c6b78a7ec8d771a1c89ae18e050708.
DR   GrainGenes; DQ680130; DQ680130.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..748
FT                   /organism="Barley yellow dwarf virus MAV"
FT                   /host="Avena sativa L."
FT                   /isolate="MAV39P5o2003"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Alaska, Palmer"
FT                   /isolation_source="leaf tissue from infected oats at site
FT                   5"
FT                   /collection_date="2003"
FT                   /db_xref="taxon:2169984"
FT   CDS             194..>748
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q06Q50"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q06Q50"
FT                   /protein_id="ABG77621.1"
FT                   /translation="MNSVGLNSRKRKRNGQPKRTRTIRTVVMAQPARPRPRRRGRRRAR
FT                   GGWPNSISRPTGRTEIFIFSVNDIKANSTGVIKFGPDLSQCTALSGGILKSYHRYKISN
FT                   VKVEFKSHASSTTVGAMFIELDTSCTQSALGSYINSFTLSKSGTKAFGPRQIGGEDFRE
FT                   STVNQFYMLYKANGSTSDTAGQ"
FT   gene            234..692
FT                   /gene="MP"
FT   CDS             234..692
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="17k probable movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q06Q37"
FT                   /protein_id="ABG77622.1"
FT                   /translation="MDNQNALEQFGQWLWHSPPDQDPDDEVVDAQEEDGQILYLDQQAG
FT                   LRYSYSQSTTLKPTPQGSSNSAPIFRNAQRFQVEYLSPTTVTRSQTSRLSLSHTRPPLQ
FT                   SAQCLLNSTLRAHNQPWVATLTHSPSQNPEPKRSALARLVGKTSGKAR"
XX
SQ   Sequence 748 BP; 230 A; 189 C; 155 G; 174 T; 0 other;
     aaagtgtgaa ggtgacatct ccacatctgc aatctatact ccttgcaata ccgcaaacat        60
     ccccgcaata tagctattaa ttaccaaatc ttggccggat ttggcatagg gtttattata       120
     tctattccct gtacattagc tctcacgtac tttgtgtaca ataaagtttc agacaccact       180
     agagaggtgg tgaatgaatt cagtaggcct taattccaga aagaggaaga gaaatggaca       240
     accaaaacgc actcgaacaa ttcggacagt ggttatggca cagcccgcca gaccaagacc       300
     cagacgacga ggtcgtagac gcgcaagagg aggatggcca aattctatat ctagaccaac       360
     aggcaggact gagatattca tattctcagt caacgacatt aaagccaact ccacaggggt       420
     catcaaattc ggccccgatc tttcgcaatg cacagcgctt tcaggtggaa tacttaagtc       480
     ctaccaccgt tacaagatct caaacgtcaa ggttgagttt aagtcacacg cgtcctccac       540
     tacagtcggc gcaatgttta ttgaactcga cacttcgtgc acacaatcag ccttgggtag       600
     ctacattaac tcattcaccc tctcaaaatc cggaaccaaa gcgttcggcc ctcgccagat       660
     tggtggggaa gacttcaggg aaagcacggt gaatcaattt tacatgctct acaaagccaa       720
     tggatcaacc tcagatacag ctggtcaa                                          748
//