ID   DQ680117; SV 1; linear; genomic RNA; STD; VRL; 760 BP.
XX
AC   DQ680117;
XX
DT   27-SEP-2006 (Rel. 89, Created)
DT   23-JAN-2007 (Rel. 90, Last updated, Version 4)
XX
DE   Barley yellow dwarf virus - MAV isolate MAV08P5o03 coat protein gene,
DE   partial cds; and 17k probable movement protein (MP) gene, complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus MAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-760
RX   DOI; 10.1007/s00705-006-0846-4.
RX   PUBMED; 17013543.
RA   Robertson N.L., French R.;
RT   "Genetic analysis of a novel Alaska barley yellow dwarf virus in the family
RT   Luteoviridae";
RL   Arch. Virol. 152(2):369-382(2007).
XX
RN   [2]
RP   1-760
RA   Robertson N.L., French R.;
RT   ;
RL   Submitted (08-JUN-2006) to the INSDC.
RL   Arctic Plant Germplasm Research and Introduction, United States Dept. of
RL   Agriculture, Agricultural Research Service, 533 E. Fireweed Ave., Palmer,
RL   AK 99645, USA
XX
DR   MD5; ff0a2e48fad59f70044716cd57241e73.
DR   GrainGenes; DQ680117; DQ680117.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..760
FT                   /organism="Barley yellow dwarf virus MAV"
FT                   /host="Avena sativa L."
FT                   /isolate="MAV08P5o03"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Alaska, Palmer"
FT                   /isolation_source="leaf tissue from infected oats at site
FT                   5"
FT                   /collection_date="2003"
FT                   /db_xref="taxon:2169984"
FT   CDS             194..>760
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q06Q76"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q06Q76"
FT                   /protein_id="ABG77595.1"
FT                   /translation="MNSVGLNSRKRKRNGQPKRTRTIRTVVMAQPARPRPRRRGRRRAR
FT                   GGWTNSVPRPTGRTEIFIFSVNDIKANSSGVIKFGPDLSQCTALSGGILKSYHRYKISN
FT                   VKIEFKSHASSTTVGAMFIELDTSCTQSALGSYINSFTLSKSGTKAFGPRQIGGEDFRE
FT                   STVNQFYMLYKANGSTSDTAGQFIIT"
FT   gene            234..692
FT                   /gene="MP"
FT   CDS             234..692
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="17k probable movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q06Q37"
FT                   /protein_id="ABG77596.1"
FT                   /translation="MDNQNALEQFGQWLWHSPPDQDPDDEVVDAQEEDGQILYLDQQAG
FT                   LRYSYSQSTTLKPTPQGSSNSAPIFRNAQRFQVEYLSPTTVTRSQTSRLSLSHTRPPLQ
FT                   SAQCLLNSTLRAHNQPWVATLTHSPSQNPEPKRSALARLVGKTSGKAR"
XX
SQ   Sequence 760 BP; 234 A; 196 C; 156 G; 174 T; 0 other;
     aaagtgtgaa ggtgacatct ccacatctgc aatcaatact cctggcaata ccacaaacat        60
     ccccgcaata tagctattaa ttaccaaatc ttggccgggt ttggcatagg gtttattata       120
     tctatcccct gtacattagc tctcacgtac tttgtttaca ataaagtttc agacaccact       180
     agagaggtgg tgaatgaatt cagtaggcct taattccaga aagaggaaga gaaatggaca       240
     accaaaacgc actcgaacaa ttcggacagt ggttatggca cagcccgcca gaccaagacc       300
     cagacgacga ggtcgtagac gcgcaagagg aggatggaca aattctgtac ctagaccaac       360
     aggcaggact gagatattca tattctcagt caacgacatt aaagccaact cctcaggggt       420
     catcaaattc ggccccgatc tttcgcaatg cacagcgctt tcaggtggaa tacttaagtc       480
     ctaccaccgt tacaagatct caaacgtcaa gattgagttt aagtcacacg cgtcctccac       540
     tacagtcggc gcaatgttta ttgaactcga cacttcgtgc acacaatcag ccttgggtag       600
     ctacattaac tcattcaccc tctcaaaatc cggaaccaaa gcgttcggcc ctcgccagat       660
     tggtggggaa gacttcaggg aaagcacggt gaatcaattc tacatgctct acaaagccaa       720
     cggatcaacc tcagacacag ctggtcaatt tatcatcacg                             760
//