ID   DQ680115; SV 1; linear; genomic RNA; STD; VRL; 731 BP.
XX
AC   DQ680115;
XX
DT   27-SEP-2006 (Rel. 89, Created)
DT   23-JAN-2007 (Rel. 90, Last updated, Version 4)
XX
DE   Barley yellow dwarf virus - MAV isolate MAV02P5o03 coat protein gene,
DE   partial cds; and 17k probable movement protein (MP) gene, complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus MAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-731
RX   DOI; 10.1007/s00705-006-0846-4.
RX   PUBMED; 17013543.
RA   Robertson N.L., French R.;
RT   "Genetic analysis of a novel Alaska barley yellow dwarf virus in the family
RT   Luteoviridae";
RL   Arch. Virol. 152(2):369-382(2007).
XX
RN   [2]
RP   1-731
RA   Robertson N.L., French R.;
RT   ;
RL   Submitted (08-JUN-2006) to the INSDC.
RL   Arctic Plant Germplasm Research and Introduction, United States Dept. of
RL   Agriculture, Agricultural Research Service, 533 E. Fireweed Ave., Palmer,
RL   AK 99645, USA
XX
DR   MD5; 03f0e93796d04ed7b955d5daa3c89816.
DR   GrainGenes; DQ680115; DQ680115.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..731
FT                   /organism="Barley yellow dwarf virus MAV"
FT                   /host="Avena sativa L."
FT                   /isolate="MAV02P5o03"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Alaska, Palmer"
FT                   /isolation_source="leaf tissue from infected oats at site
FT                   5"
FT                   /collection_date="2003"
FT                   /db_xref="taxon:2169984"
FT   CDS             163..>731
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q06Q80"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q06Q80"
FT                   /protein_id="ABG77591.1"
FT                   /translation="MNSVGLNSRKRKRNGQPKRTRTIRTVVMAQPARSRPRRRGRRRAR
FT                   GGWPNSISRPTGRTEIFIFSVNDIKANSTGVIKFGPDLSQCTALSGGILKSYHRYKISN
FT                   VKVEFKSHASSTTVGAMFIELDTSCTQSTLGSYINSFTLSKSGTKAFGPRQIGGEDFRE
FT                   STVNQFYMLYKANGSTSDTAGQFIIT"
FT   gene            203..661
FT                   /gene="MP"
FT   CDS             203..661
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="17k probable movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q06Q37"
FT                   /protein_id="ABG77592.1"
FT                   /translation="MDNQNALEQFGQWLWHSPPDQDPDDEVVDAQEEDGQILYLDQQAG
FT                   LRYSYSQSTTLKPTPQGSSNSAPIFRNAQRFQVEYLSPTTVTRSQTSRLSLSHTRPPLQ
FT                   SAQCLLNSTLRAHNQPWVATLTHSPSQNPEPKRSALARLVGKTSGKAR"
XX
SQ   Sequence 731 BP; 225 A; 186 C; 150 G; 170 T; 0 other;
     atcaatactc ctggcaatac cacaaacatc cccgcagtat agctattaat taccaaatct        60
     tggccgggtt tggcataggg tttattatat ctattccctg tacattagct ctcacgtact       120
     ttgtgtacaa taaagtttca gacaccacta gagaggtggt gaatgaattc agtaggcctt       180
     aattccagaa agaggaagag aaatggacaa ccaaaacgca ctcgaacaat tcggacagtg       240
     gttatggcac agcccgccag atcaagaccc agacgacgag gtcgtagacg cgcaagagga       300
     ggatggccaa attctatatc tagaccaaca ggcaggactg agatattcat attctcagtc       360
     aacgacatta aagccaactc cacaggggtc atcaaattcg gccccgatct ttcgcaatgc       420
     acagcgcttt caggtggaat acttaagtcc taccaccgtt acaagatctc aaacgtcaag       480
     gttgagttta agtcacacgc gtcctccact acagtcggcg caatgtttat tgaactcgac       540
     acttcgtgca cacaatcaac cttgggtagc tacattaact cattcaccct ctcaaaatcc       600
     ggaaccaaag cgttcggccc tcgccagatt ggtggggaag acttcaggga aagcacggtg       660
     aatcaatttt acatgctcta caaagccaac ggatcaacct cagatacagc tggtcaattc       720
     atcatcacga t                                                            731
//