ID   DQ666638; SV 1; linear; genomic RNA; STD; VRL; 1763 BP.
XX
AC   DQ666638;
XX
DT   19-JUL-2006 (Rel. 88, Created)
DT   19-JUL-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate PRSV-AP Ko polyprotein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1763
RA   Sreenivasulu M., Sai Gopal D.V.R.;
RT   "Sequence diversity in 3' terminal region of Papaya ringspot virus isolates
RT   from south India";
RL   Unpublished.
XX
RN   [2]
RP   1-1763
RA   Sreenivasulu M., Sai Gopal D.V.R.;
RT   ;
RL   Submitted (02-JUN-2006) to the INSDC.
RL   Department of Virology, Sri Venkateswara University, Tirupati, Andhra
RL   Pradesh 517502, India
XX
DR   MD5; d83d8bcb038841d27e28f6c84625bf60.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1763
FT                   /organism="Papaya ringspot virus"
FT                   /host="Carica papaya"
FT                   /isolate="PRSV-AP Ko"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1557
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q0PZS5"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q0PZS5"
FT                   /protein_id="ABG72801.1"
FT                   /translation="GNNSGQPSTVVDNTLMVLITMYYALRKAGYDTKAQEDMCVFYING
FT                   DDLCIAIHPDHEHVLDSFSSSFAELGLKYDFTQRHRNKQDLWFMSHRGILIDNVYIPKL
FT                   EPERIVAILEWDKSKLPEHRLEAITAAMIESWGYDELTHQIRRFYQWVLEQAPFNELAR
FT                   QGRAPYVSEVGLRRLYTSERGSMDELEAYIDKYFERERGDFPELLVYHESMSSDNHQII
FT                   YHLNEHVYHQSKTEAVDAGLNDKLKEKEKEKDKEREKEKKDKKDASDGSDVSTSTKTGE
FT                   RDRDVNAGTSGTFTVPRIKLFTDKMMLPRIKGKVVLNLNHLLQYNPQQIDISNTRATQS
FT                   QFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDITGVWVMMDGETQVDYPIKP
FT                   LIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVN
FT                   SKTPDRAREAHMQMKAAALRNSNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMR
FT                   N"
FT   mat_peptide     <1..636
FT                   /product="nuclear inclusion protein b"
FT   mat_peptide     637..1554
FT                   /product="capsid protein"
FT   3'UTR           1558..1763
XX
SQ   Sequence 1763 BP; 545 A; 311 C; 428 G; 479 T; 0 other;
     ggaaacaaca gcgggcaacc ttcgacagtt gtcgataata cattgatggt tttaatcaca        60
     atgtattatg cattgcggaa ggctggttac gatacgaagg ctcaagaaga tatgtgcgtg       120
     ttttatatca atggtgatga tctctgtatc gccattcacc cggaccatga gcatgttctt       180
     gattcattct ctagttcatt tgctgaactt gggcttaagt atgacttcac acaaagacat       240
     aggaataaac aggatttgtg gttcatgtca catcgaggta ttctgatcga taacgtttac       300
     attccgaaac ttgaacctga gcgaattgtc gcaattcttg agtgggacaa atctaagctt       360
     ccggagcatc gcttggaagc aatcacagca gcaatgatag agtcatgggg ttatgatgag       420
     ctaacacacc agatccgcag attttaccaa tgggttcttg agcaagctcc attcaatgag       480
     ttggctaggc aagggagagc tccttacgtt tcggaagttg ggctaagaag gttgtatact       540
     agtgagcgtg gttcgatgga tgagttggaa gcatatattg ataaatactt cgaacgagag       600
     cgtggagatt ttcctgagtt attggtgtat catgaatcaa tgagttcaga taatcatcag       660
     attatctatc acttgaatga acatgtttat catcaatcca agactgaagc ggtggatgca       720
     ggtctcaatg ataagctgaa ggagaaagag aaggaaaaag ataaagagag agaaaaagaa       780
     aagaaagaca agaaggacgc tagtgacgga agcgatgtgt caactagcac aaaaactgga       840
     gagagagata gagatgttaa tgctggaact agtggcacat tcacagttcc aagaatcaaa       900
     ttatttactg ataaaatgat gttgcctaga attaagggga aagttgtcct taatttgaat       960
     catcttcttc agtataatcc acagcagatt gacatctcaa acactcgtgc cacgcaatca      1020
     cagtttgaga agtggtatga gggagtgagg aatgactatg gccttaatga taatgaaatg      1080
     caagtgatgt taaatggttt aatggtttgg tgtatcgaaa atggtacatc cccagacata      1140
     actggtgtct gggttatgat ggatggtgag actcaggttg attatccaat taaaccgtta      1200
     attgaacatg caactccttc gtttaggcaa atcatggctc atttcagtaa cgcggcagaa      1260
     gcatatatcg caaagcgaaa tgcaactgag aggtacatgc cgcggtatgg aatcaagaga      1320
     aatttgactg acattagcct cgctagatat gctttcgatt tctatgaggt gaactcaaaa      1380
     acgcctgata gagctcgaga ggctcatatg cagatgaaag cagctgcact gcgaaactca      1440
     aatcgcagaa tgtttggaat ggacggtagt gtcagtaaca aggaagaaaa cacggagaga      1500
     cacacagtgg aagatgtcaa tagagacatg cactctctcc tgggtatgcg caactaaata      1560
     tccgcacttg tgtgtttgtc gtgccctgca cgaccctgtt tcaccttata atactatata      1620
     agcattagaa tacagtgtgg ttttaccacc gcttctattt tatagtgagg gtggccctcc      1680
     gtgcttttag tattattcga gttctctgag tctccataca gtgtgggtgg cccacgtgtt      1740
     atttgagcct cttagaatga gag                                              1763
//