ID   DQ660341; SV 1; linear; genomic RNA; STD; VRL; 669 BP.
XX
AC   DQ660341;
XX
DT   01-JUN-2007 (Rel. 92, Created)
DT   01-JUN-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Citrus tristeza virus clone 6.7 capsid protein gene, partial cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-669
RA   Silva G., Fonseca F., Santos C., Nolasco G.;
RT   "Presence of CTV in Angola and S. Tome and Principe: Characterization of
RT   isolates based on coat protein gene analysis";
RL   Unpublished.
XX
RN   [2]
RP   1-669
RA   Silva G., Fonseca F., Santos C., Nolasco G.;
RT   ;
RL   Submitted (29-MAY-2006) to the INSDC.
RL   CDCTPV, UAlg, Campus de Gambelas, Faro 8005-139, Portugal
XX
DR   MD5; 237f6b0842a075a0b0889dace52655f3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..669
FT                   /organism="Citrus tristeza virus"
FT                   /host="Clementine cultivar"
FT                   /mol_type="genomic RNA"
FT                   /country="Sao Tome and Principe"
FT                   /clone="6.7"
FT                   /db_xref="taxon:12162"
FT   CDS             1..>669
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /db_xref="GOA:A5X7W2"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:A5X7W2"
FT                   /protein_id="ABG56398.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 669 BP; 197 A; 128 C; 164 G; 180 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga aggcgacgat        60
     gttgttgccg ctgagtcttc tttcggttcc ttaaacttac acatcgatcc aactctgata       120
     gcgatgaatg acgtgcgtca gttgggtacc caacagaacg ctgctttaaa cagagactta       180
     tttcttactt tgaaagggaa gcatcctaac ttacctgaca aagataagga ctttcactta       240
     gctatgatgt tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgatact       300
     acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa actttggact       360
     gacgtcgtgt ttaactccaa gggtattggc aaccgtacta acgcccttcg agtttggggt       420
     agaactaacg atgcccttta cttagctttt tgtagacaaa atcgcaattt gagttatggc       480
     ggacgtccgc tagatgcagg gattccggcc gggtatcatt acctgtgtgc agatttcttg       540
     accggagctg gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg       600
     ttgaagaagc gaggagctga tgaagttgta gttaccaatg tcaggcagct tgggaaattc       660
     aacacacgt                                                               669
//