ID DQ660333; SV 1; linear; genomic RNA; STD; VRL; 6858 BP. XX AC DQ660333; XX DT 08-JUL-2006 (Rel. 88, Created) DT 21-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Chenopodium mosaic virus X, complete genome. XX KW . XX OS Malva mosaic virus OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6858 RX DOI; 10.1016/j.meegid.2007.10.006. RX PUBMED; 18054524. RA Cote F., Pare C., Majeau N., Bolduc M., Leblanc E., Bergeron M.G., RA Bernardy M.G., Leclerc D.; RT "Nucleotide sequence and phylogenetic analysis of a new potexvirus: Malva RT mosaic virus"; RL Infect Genet Evol 8(1):83-93(2008). XX RN [2] RP 1-6858 RA Cote F., Pare C., Leblanc E., Bernardy M.G., Bergeron M.G., Leclerc D.; RT ; RL Submitted (29-MAY-2006) to the INSDC. RL Centre de Recherche en Infectiologie, Universite Laval (CHUL), 2705 Boul. RL Laurier, Quebec, Quebec G1V 4G2, Canada XX DR MD5; 76162c16b40f323814eb894516047128. XX FH Key Location/Qualifiers FH FT source 1..6858 FT /organism="Malva mosaic virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:392174" FT CDS 82..4797 FT /codon_start=1 FT /product="ORF 1" FT /note="replicase" FT /db_xref="GOA:Q0Z8V5" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR005123" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR027450" FT /db_xref="InterPro:IPR037151" FT /db_xref="UniProtKB/TrEMBL:Q0Z8V5" FT /protein_id="ABG48660.1" FT /translation="MAKVRASLERIRDPSVQTALSEAAYTHVRPVLKEALVNCPYALTD FT AEADCLENFGITINPYATQTHTHAACKAIENRMLEIVGKHLPKEKVTMLFLKKSKLRYL FT RRAAALNDVFINKDMEPKDLFRYDRDTIRNSLQNVDTSLAYMSDTLHFMNFNSVAQLFV FT DSPKLTTLLATVVLPVEALHRRSSLYPALYSINYHPQGFEYIPGNHGGGAYFHPYDTLD FT WLKVRKILAKDFYHLDEKFTLTFQMVESIGANHLFIIHKADMITPGMRTFCRDSLVTLP FT KIFCPDSMNANRPLSKTKAMQLMLYCKSVKQVTERDIYAKFRQIIPTIELELYEPDEII FT HLCNYLNFMTQLSSITSYEDLLGNSLWRRLTQPIKAQVKKFLDFFRGQDDFTKLLGVLK FT WEAFSYSLCPSDFHATFISKSAQDFATSQEVPIDEAVETIRHCRNNPNFVSLDDFEVSS FT LPDFLSPPAQMEDFSTDESVDDTPTCPTTNLPNQDVPEEHQVVIHNSDWQVDTILPIIR FT NLPYTQLKGRKCYFLTTSPDIDYGHDSVSYQACPWDEVLSDILLTTGQRANACLIQVYE FT QDAKIPLHRDDEKVYAGHPILTMNFGQASFSFSNGETFELTDGQWFVMSGKYLTQYKHA FT AFAKSVGRISLTFRTHVKTLAGHPISSRSLEPTLNDVVEPEEATKNDVSDAPEVPKSFR FT NPLSSQASEPIPSTTDSLPWNAWKPLLKEHGFEGDQQQLDSSGFMILPITDIKKVPHVP FT YPSEVPEALQKALIAIKRYPVAITLDHKRAGSYASDIKNSRTGKLLAQKDDKWKAAFAY FT KMQHEDHVVVGTVIHGCGGSGKSHTLQNWMRTLKADQSDVTVVTPTILLRNDWSTKLPI FT LPAETFKTFEKAIVQPCNPVVIFDDYTKLPPGIIEALVMHHRNVSFIILTGDSRQSVYH FT EMNPEAYISALPEAVEVFEPYCEFYVNASHRNVKQLANKLGVYSEREGKLKVNFASHHL FT KASRTPILVPSTMKRNAMADMGHHSMTYAGCQGLTAPKVQILLDNHTQFCSDRVLYTCL FT SRAVDTIHFINTGPTTGDYWTKLESTPYLKAFIDTYRDEKTELYNSSPADDSPTEPEAP FT KTHFPVAPKPLLEPLVAELADKESREIFSRSTGYSNTIQTNDPVVQLFQHQQAKDETLY FT WATIEARLSISTPEENLREFKMKADVGDILFMNYAKLMQLPAEPVPFEERLWEISAAEV FT RNTYLSKPIGNLVNAATRQSPDFPANKIALFLKSQWVKKVEKLGAIKVKPGQTIASFHA FT RNGDVVRYDARYIRKMRARFQPDNIFINCEATPEDLNKFVKTKWHFNRPAHTNDFTAFD FT QSQDGAMLQFEVMKAKFFNIPADIIEGYIYIKLNAVIFLGTLGIMRLSGEGPTFDANTE FT CSIAYNATRFHIEDDTAQVYAGDDMALDRISTEKSSFAKLAHQLKLTSKPQFPRQVRGD FT YAEFCGWVLTPAGILKHSLKMQASIQLQKKINNIAQSARSYALDLRYAYQMGMNYRSTS FT LKKKQISTSSLSETCICCTRRTCWLTAVLAHPETLSCLSYAVPRQHKNATI" FT CDS 4873..5580 FT /codon_start=1 FT /product="ORF 2" FT /note="triple gene block 1 (TGB 1)" FT /db_xref="GOA:Q0Z8V4" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q0Z8V4" FT /protein_id="ABG48661.1" FT /translation="MELDYLIKLLEFNNFPRTNLDFSLPLVVHGVAGCGKSTIISKLAK FT AFPTLVVASFTPQILDGNTGRKQVAVDGSPVDILDEYLSGPTPSVRLALFCDPLQYSCE FT KPRLPHFISLTTHRFCPLTADFLNSKFGCEIISLRQDSCEIVEADPFATDPEGVVITFE FT PEVKSILERHQCFPTDISTLWGKNLETVSVYLSSFDTCLDSFRTDLFLSLTRHTKKLLV FT FDFNAWPDSSDEL" FT CDS 5549..5908 FT /codon_start=1 FT /product="ORF 3" FT /note="triple gene block 2 (TGB 2)" FT /db_xref="GOA:Q0Z8V3" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q0Z8V3" FT /protein_id="ABG48662.1" FT /translation="MPGLTAPTNYEQVYKILAIGVLSCLSIYALRASHLPHVGDNLHHL FT PHGGNYVDGTKRISYFKPHTSHGANYKWSAACAIGFLSLLIFAQTRFNSRPVSTSVRVC FT AHCTSNSSVPSDNHR" FT CDS 5748..6002 FT /codon_start=1 FT /product="ORF 4" FT /note="triple gene block 3 (TGB 3)" FT /db_xref="GOA:Q0Z8V2" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q0Z8V2" FT /protein_id="ABG48663.1" FT /translation="MVLTTSGVPPAPSGFFHFLSSHKLDLILVLSVLLFVYALIAPPTP FT VCQVIITGESVKVLNCPAPDKIIASIQLAPWNGVKFPIL" FT CDS 6057..6788 FT /codon_start=1 FT /product="ORF 5" FT /note="coat protein" FT /db_xref="GOA:Q0Z8V1" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q0Z8V1" FT /protein_id="ABG48664.1" FT /translation="MSNSGSAAAAPSQPSAAKKPAENIPSQEPQPADPADPTRAPTLED FT LKAINYVSTTTAVATPAEIKLLGDLFRKKGIDANAVAPAMWDLARAYADVQASRSAILS FT GSTPSNPSITRTALAKQLYSIDLTPRQFCMYFAKIVWNMMLATHTPPANWAKQGLPEDC FT KYAGFDFFEGVLSPSALEPADGLIRMPNQKEIQAHSTAKYGSLARQRIQNGNYVSNLAE FT VTHGRAGGVNAMYAIEAPPEF" XX SQ Sequence 6858 BP; 2016 A; 1669 C; 1404 G; 1769 T; 0 other; gaaaacaaaa caacacaaac acactctact cagtagtaac catataagga caataaccgt 60 ttaacaacac tatcgtccca tatggcaaaa gttagagcgt cgttggaaag gattagagac 120 ccatcagtcc aaactgcact ctcggaggca gcttacactc atgtccgtcc tgtcctaaaa 180 gaagccttgg tcaattgccc ttatgcactg accgacgcgg aagcagattg tttagaaaat 240 tttggtatta caataaaccc atacgccact caaacccaca ctcacgcagc ttgtaaagca 300 atagagaata gaatgttaga gatagtaggc aagcacttgc ccaaagagaa agttaccatg 360 ctcttcctaa agaaaagtaa attaaggtat ctgcgcagag ccgctgccct aaatgacgtt 420 ttcattaaca aagacatgga accaaaagac ctctttaggt atgatagaga tacaataaga 480 aatagtcttc aaaatgtaga cactagttta gcttacatgt ctgacacact acatttcatg 540 aactttaact cagtagctca gctctttgtg gattctccaa aattgaccac tttattggca 600 acagtagtgt taccagtaga agcgctacat cgcagatcgt ctctatatcc agcgttatat 660 tcaatcaact accacccaca agggtttgaa tatattcctg ggaaccatgg aggaggggct 720 tactttcacc catatgacac cttagattgg ctgaaagtcc gcaagatcct tgcaaaagac 780 ttttatcatc ttgatgagaa atttacttta acattccaga tggtagaaag catcggggcc 840 aatcacctct tcatcattca caaagccgac atgataactc ccggcatgag aacattctgc 900 agagactctc tggtgacttt accaaaaatc ttttgccctg attcgatgaa cgctaacaga 960 cctttatcga aaaccaaagc tatgcaattg atgttgtatt gcaaatctgt taagcaagtt 1020 acggagagag acatctatgc taaattccga caaattattc ctaccataga gttggaactg 1080 tatgaaccag acgagataat tcacctttgc aactatctca acttcatgac tcaactcagt 1140 tctataacct cctacgaaga tttgttgggt aacagtttat ggcgtagact cactcagcca 1200 atcaaggctc aggttaaaaa atttttggac ttcttccgcg gtcaagatga tttcaccaaa 1260 ttgctcggcg tactaaaatg ggaagctttt agctactccc tgtgtccctc cgattttcac 1320 gccactttca tcagcaaatc tgctcaagat tttgcgacat cacaagaagt ccccattgac 1380 gaagctgttg agacaatacg acattgtcgc aataatccca actttgtcag tctggatgat 1440 tttgaagtgt cgagtctacc agatttttta tctcccccag cccaaatgga ggacttttct 1500 acagatgaaa gtgtggatga cacaccgacg tgcccgacaa ccaaccttcc taaccaggac 1560 gttccggaag aacatcaagt ggtgatccac aacagcgatt ggcaggtaga cacaatattg 1620 cctatcatac gcaacctacc atacacacaa ctgaagggtc gaaaatgtta ctttttgacc 1680 acctcacccg acatagatta tgggcacgac tctgttagct accaagcttg tccttgggat 1740 gaagttctta gtgacatctt gctaactaca ggacaaagag caaatgcatg cctcatccag 1800 gtttacgagc aagatgccaa aataccatta cacagagatg atgagaaagt ttacgcaggg 1860 catcccattc taactatgaa ctttggccag gcatctttct cgttttccaa tggagaaact 1920 tttgaactaa cagacggtca gtggttcgtc atgagtggca agtacttgac acagtataaa 1980 catgcagctt ttgctaagtc tgtcggaagg atatccctga ccttccgaac acatgttaag 2040 acactggcag gccaccccat ttcgagtcgt agccttgaac ctacgctgaa tgacgtagtt 2100 gaaccggaag aggctactaa gaacgatgtc tcagatgctc ctgaagtgcc aaaatctttt 2160 agaaatccac tgagttcaca agcatcggag ccaatcccgt caaccactga ctcacttccc 2220 tggaatgctt ggaagccttt actcaaggaa catggcttcg aaggcgatca acagcagctg 2280 gactcatctg ggttcatgat tttgcccatt acggacatca agaaagtgcc acatgtaccc 2340 taccccagtg aagtgccaga agctttacag aaagctttga tagccatcaa acgctacccc 2400 gtggctataa ctctagacca caagagagcg ggttcttatg cttctgacat caagaatagc 2460 cggacaggga aactgttagc acaaaaagat gataaatgga aagcagcatt tgcttacaag 2520 atgcagcacg aagaccatgt ggtggtcggt acagtcatac acggttgtgg aggatcaggg 2580 aaatctcata ccctacaaaa ctggatgagg actttgaagg cagaccagag tgatgtaact 2640 gtagtcacac caaccatttt gttacgaaat gattggagca ctaagttacc catcttgcca 2700 gcagaaacct tcaaaacttt tgagaaagcc attgtgcagc catgtaaccc agtagtcatc 2760 ttcgatgatt acacgaagct tccgcctggc atcattgaag cacttgtgat gcaccatcgt 2820 aatgtgagct tcattattct aactggagac agtaggcagt ctgtgtacca tgaaatgaat 2880 cctgaggctt acatctccgc tttaccagaa gctgttgaag tttttgagcc ttattgcgaa 2940 ttctacgtca atgcctcaca caggaatgta aaacagctgg ctaataaatt aggcgtatat 3000 tcggagagag aaggcaaatt gaaagtcaat ttcgcctccc atcatttgaa agcttccaga 3060 acccctattt tggtgccatc tactatgaaa aggaacgcca tggctgacat gggccaccac 3120 agcatgacct atgcaggctg ccaaggcctg actgccccaa aagtgcaaat cctcttagac 3180 aaccacaccc aattttgttc cgacagggtg ttgtatacct gcctttcccg agctgtggac 3240 acaattcatt tcattaacac aggtcccacc actggggatt attggactaa gctggaaagt 3300 actccatacc tgaaagcttt catcgacacg tacagggacg agaaaacgga attgtacaac 3360 agctcacctg ccgatgatag cccaactgaa ccagaggctc cgaaaactca cttcccagtt 3420 gccccaaaac cacttttgga acctctggtg gctgaactag ctgataaaga gagtagagaa 3480 attttttctc gcagcacagg gtattcaaac accattcaaa ctaacgaccc cgtggtgcag 3540 cttttccaac atcaacaggc gaaagacgag acattgtatt gggcaactat tgaagcccga 3600 ctctctatct ctacccccga ggagaacctt agagagttca aaatgaaagc tgatgttggg 3660 gatattctct tcatgaatta tgccaagcta atgcaactac cagcagaacc cgtaccattc 3720 gaagaaaggc tttgggagat ctcagcggca gaggtgcgca atacctatct gagtaagcca 3780 ataggaaatt tggtgaatgc agctactagg cagagcccag atttccctgc gaacaaaatt 3840 gcgctcttcc tcaaatccca gtgggtcaag aaggttgaaa agctgggtgc tataaaagtc 3900 aaacctggcc agaccattgc ctcctttcat gcaagaaacg gtgatgttgt acggtacgat 3960 gcaagataca tacgcaagat gagggcccgg tttcagcccg ataatatctt tattaactgt 4020 gaagctacgc ccgaagatct aaacaaattt gttaagacca agtggcactt caacagacct 4080 gcccacacaa atgatttcac agcgtttgac caatctcaag atggcgctat gctacaattt 4140 gaagttatga aagccaagtt cttcaatata ccagcagaca ttattgaagg atacatatac 4200 ataaagctaa acgctgtgat tttccttggc actttgggca tcatgaggct ttcaggggag 4260 ggacccactt tcgatgccaa cactgaatgt tccattgcat ataatgccac cagatttcat 4320 attgaagatg acacagcaca agtgtatgca ggagacgata tggccttaga tagaatcagc 4380 acagaaaaga gcagttttgc aaagctggca catcaactca aattgacgtc caaacctcaa 4440 tttccaagac aggtccgtgg ggattatgca gagttttgtg gttgggtgtt gactccagct 4500 gggattttga agcattctct taaaatgcag gcctcgatcc aactccaaaa gaagatcaac 4560 aacatagcac agagtgctag gtcttatgct ttggatctgc gatatgccta tcaaatgggg 4620 atgaattaca ggagcacctc actgaagaag aagcagattt ccaccagcag tctatcagag 4680 acatgcatct gttgcaccag gaggacgtgt tggttaacgg cagtgctagc ccacccagag 4740 acactgagtt gcctaagcta tgcggttcca cggcaacaca aaaacgcaac aatttgaaga 4800 agaagaaaaa gagtagggtg gtggacatac ttcctccccc tactagccgg gttaagttac 4860 ccagtgttcg aaatggagtt agattatcta attaaattgt tagaatttaa taattttcca 4920 cgcacaaacc tagatttctc gttaccctta gtagtacacg gcgttgctgg ctgtggcaag 4980 tcaacaataa ttagcaaatt agctaaagct ttccccactc tagtagtcgc ttcctttacc 5040 ccacaaatct tagacggtaa tacaggacgg aaacaagtcg ctgtggacgg cagcccggtt 5100 gatattttag acgagtatct aagtggtccc accccttcag tgagattagc gcttttctgc 5160 gacccacttc aatattcttg cgaaaagcct cggttgcctc acttcatctc gctcacaact 5220 catcggttct gcccactcac agcggacttc ctgaattcaa aatttgggtg tgaaatcatt 5280 tcactccgcc aagacagttg tgaaatcgtt gaagcagacc ccttcgccac tgatcctgaa 5340 ggtgtcgtta ttacttttga acccgaggtt aaaagcatcc ttgaaaggca ccagtgtttt 5400 ccaactgata ttagcacact ttggggcaag aacttagaaa ccgttagcgt gtacctcagc 5460 tcatttgaca cttgtttgga ttcttttaga acagatctgt tcctaagcct cacacgacac 5520 actaagaagc ttcttgtttt tgacttcaat gcctggcctg acagctccga cgaactatga 5580 gcaggtttac aagattttag ctattggtgt gctcagttgc ttatctatct acgcacttag 5640 agcaagtcat ctgccccacg ttggtgacaa cctccatcat ttaccacacg gcggaaatta 5700 cgttgacggc actaagagaa tctcctactt taaacctcac acctcacatg gtgctaacta 5760 caagtggagt gccgcctgcg ccatcgggtt tctttcactt cttatcttcg cacaaactcg 5820 atttaattct cgtcctgtca gtacttctgt tcgtgtatgc gctcattgca cctccaactc 5880 cagtgtgcca agtgataatc accggtgaat ctgtcaaagt tctaaactgt cctgcacccg 5940 ataagattat agctagtatt caactcgccc cttggaacgg ggttaagttt cctattttat 6000 aggtttgaaa ataaattaag tatcgttata tattgttgat attgaataac cactccatgt 6060 cgaactctgg ttcagccgct gccgctccat ctcaaccttc tgctgccaag aaacccgctg 6120 agaacatccc ttcccaagaa ccacaacccg cggaccctgc tgatcccact agggctccta 6180 ctcttgagga tctcaaagct atcaattatg tgtcaacaac cacagccgtg gcaaccccag 6240 cagaaatcaa actactgggc gatctgtttc ggaaaaaggg tattgatgcc aatgctgtgg 6300 ctcctgctat gtgggatctc gctcgtgctt atgcggatgt ccaagctagt cgctcagcta 6360 ttctgtctgg tagcacaccc tccaatccgt ccataacacg cacagccttg gctaaacaat 6420 tgtactcaat tgacctcact ccacggcaat tttgtatgta ctttgccaag attgtctgga 6480 acatgatgct tgccactcac actccacctg ccaattgggc taagcagggt ctccctgagg 6540 attgcaaata tgcaggcttt gatttctttg agggtgtcct gtccccatct gctttggagc 6600 ctgctgatgg actcatccgc atgcccaatc agaaagaaat tcaagcccac tctacagcca 6660 aatatggatc actagcacgt cagcgcatcc agaatggaaa ctacgtttcc aacttggccg 6720 aggtaactca tggtcgtgcc ggaggagtca atgcaatgta tgccattgaa gcccccccag 6780 aattctgaac gttagcaaac ttaaattaac gtgtggttta tatagtttta tttccactta 6840 tgctaataaa gtataatt 6858 //