Dbfetch
ID DQ644561; SV 1; circular; genomic DNA; STD; VRL; 2802 BP. XX AC DQ644561; XX DT 14-MAY-2008 (Rel. 95, Created) DT 03-JUN-2009 (Rel. 101, Last updated, Version 3) XX DE Merremia leaf curl virus isolate Merremia N1 segment DNA-A, complete DE sequence. XX KW . XX OS Merremia leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2802 RA Idris A., Brown J.; RT "Molecular characterization of Merremia leaf curl virus: a monopartite RT begomovirus from Puerto Rico"; RL Unpublished. XX RN [2] RP 1-2802 RA Idris A., Brown J.; RT ; RL Submitted (18-MAY-2006) to the INSDC. RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA XX DR MD5; b065801c1ff0616347de8c6b6178ba73. DR EuropePMC; PMC3485178; 23082767. XX FH Key Location/Qualifiers FH FT source 1..2802 FT /organism="Merremia leaf curl virus" FT /segment="DNA-A" FT /isolate="Merremia N1" FT /mol_type="genomic DNA" FT /country="Puerto Rico" FT /db_xref="taxon:391006" FT CDS 51..449 FT /codon_start=1 FT /product="V2" FT /db_xref="GOA:I6LGU4" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:I6LGU4" FT /protein_id="ABG90905.1" FT /translation="MITLLYKDQSGYRPWRPSMAELWDPLQNPLPDTLYGFRCMLSVKY FT LQGILKKYEPGTLGFELCSELIRIFRVRHYDRANSRYAEISSVWGDSGKTEAELRDSYR FT ALHWECCPNCCPKLCPGFKGRPDEEKEG" FT CDS 274..1038 FT /codon_start=1 FT /product="coat protein" FT /note="V1" FT /db_xref="GOA:I6LGU3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:I6LGU3" FT /protein_id="ABG90904.1" FT /translation="MTGRIRVTRRFHPYGGTPARRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFFQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1054..1488) FT /codon_start=1 FT /product="C4" FT /db_xref="GOA:I6LGU7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:I6LGU7" FT /protein_id="ABG90908.1" FT /translation="MDSRTGESLSHAQTTRALEFDTNPMSVGRTAPFHLRIMYVHDSTQ FT EGTILKFQLRVNYRERRQLGYHKIFLQFRISTTRLTGAIHNSTGILERLKWRICNELAN FT IGFLSLFNLVFVIRYLPRVCSWIDEVDTVDCTDDVKVLLY" FT CDS complement(1205..1651) FT /codon_start=1 FT /product="C2" FT /db_xref="GOA:I6LGU6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:I6LGU6" FT /protein_id="ABG90907.1" FT /translation="MSNPLSGYKRKCPEQEPLHAAAKKAKRKAPEQRTRIVWKGCGCSA FT FITTNCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTIPSQNNVCPRQHTGGNHP FT QIPAEGQLQGKEATGIPQDLPPIPDLDDPSNWCYSQFDWYFGTP" FT CDS complement(1560..2702) FT /codon_start=1 FT /product="C1" FT /db_xref="GOA:I6LGU5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6LGU5" FT /protein_id="ABG90906.1" FT /translation="MGHQRHQFRRGLRDTNMPRQPSFRVSAKNVFLTYPKCSLSKETAL FT ELLKIVNCPSDKVFIRVSQEKHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPNSSTQFH FT PNFQGAKSSSDVKSYIEKDGDYIDWGTFQVDGRSARGGQQTANDAAAEALNAGSAEAAL FT QIIREKLPRDFIFQYHNLRSNLDRIFSPPPSVYSSPFLSSSFNAVPDIISDWAAENVMD FT SAARPDRPISIVIEGPSRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNP FT QYLKHFKEFMGAQKDWQSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALK FT NWATANAIFCDVQSPFWVQEEVSGAGAITRSSEEGQEESS" XX SQ Sequence 2802 BP; 725 A; 588 C; 669 G; 820 T; 0 other; accggtgccc gccgcgccct ttaaaagtgg gccccacacg ctttgcttta atgattacat 60 tgctttataa ggaccaatca ggttaccgcc cttggcgccc aagtatggct gaattgtggg 120 accctttgca gaacccacta ccagatactt tatacggttt ccgttgtatg ctatccgtaa 180 aatacctgca aggtattttg aagaaatacg agccaggaac cctagggttc gagctctgtt 240 cggagttaat ccgtatattc agggttcgtc attatgacag ggcgaattcg cgttacgcgg 300 agatttcatc cgtatggggg gactccggca agacggaggc tgaacttcga gacagctatc 360 gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa gctatgtccc ggtttcaagg 420 ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga aggggtgtgt tggtccctgt 480 aaggtccagg actatgagtt caagatggac gttccccaca cgggaacgtt tgtctgtgtc 540 tcggatttta caagggggac tgggcttacc catcgtttgg gtaagagggt gtgtattaag 600 tccatgggta ttgatggtaa ggtttggatg gatgacaacg tcgccaagag ggaccacacc 660 aacatcatta cttactggtt gatccgagat aggaggccca ataaggatcc attgacgttt 720 tttcaggcgt ttacaatgta tgataacgag cccactactg ctaagattcg aatggatctg 780 agagatagaa tgcaggtgtt gaagaaattt tctgttactg tttctggtgg cccttataac 840 cacaaagagc aggctttagt taggaagttt tttaagggat tgtataatca tgttacttat 900 aatcataagg aggaagctaa gtatgagaat catttagaaa atgctcttat gttgtatagt 960 gctagcagtc atgctagcaa tcctgtgtat cagaccctgc gttgcagggc ttatttctat 1020 gattcgcaca ataattaata aaattttatt ttattaatac agtaatactt ttacatcatc 1080 agtacaatct accgtatcta cttcatctat ccaagagcat actcttggaa gatatctaat 1140 aacaaaaact aaattaaata gacttagaaa ccctatattt gctaattcat tacatatgcg 1200 ccatttaagg cgttccaaaa taccagtcga attgtgaata gcaccagtta gacgggtcgt 1260 cgagatccgg aattggagga agatcttgtg gtatcccagt tgcctccttt ccctgtaatt 1320 gaccctcagc tggaatttga ggatggttcc ctcctgtgtg ctgtcgtgga catacattat 1380 tctgagatgg aatggtgcag tccgacccac agacatgggg ttggtgtcga attcgagtgc 1440 tctcgtagtc tgagcatgac ttagtgattc ccctgtgcgt gaatccatgc tggtacttgc 1500 agtttgtggt tatgaaggct gaacagccgc aacccttcca cactatcctc gtcctctgtt 1560 caggagcttt cctcttggcc ttcttcgctg ctgcgtgtaa tggctcctgc tccggacact 1620 tcctcttgta cccagaaagg ggattggaca tcgcagaata tagcgtttgc tgttgcccaa 1680 ttcttgagtg ctccttgctc tggtttgtcc aaccagagtt taaatgaaga gccctctcct 1740 ggattgcata ggaagatagt gggaattccg cctttaattt gaactggctt tccgtattta 1800 cagttggatt gccagtcctt ctgggccccc atgaattcct taaagtgctt taggtattgg 1860 gggttgacgt catcaatgac gttataccaa gcactgttgc tgtacacttt tgggctaaga 1920 tctaaatgcc cacacaaata attgtgaggg cccaaagacc tggcccatac tgttttgcct 1980 attctgcttg ggccttcaat aacaatggat ataggtctat ccggccgcgc agcggaatcc 2040 atgacatttt cagcggccca gtcgctgata atgtcaggaa cggcattgaa agaagaagat 2100 aaaaaaggag aagaatatac agaaggagga ggagaaaaaa tcctatctaa attactacgt 2160 aaattatgat attgaaaaat aaaatctcta gggagtttct ccctaattat ttgtaatgct 2220 gcttcagcag agcctgcgtt taaggcctct gctgctgcat cattagctgt ctgctgacct 2280 cctctagcag atcttccgtc gacttgaaaa gtaccccagt cgatgtaatc accgtccttc 2340 tcgatgtagg acttgacatc ggacgaggat ttagctccct ggaaatttgg atggaattgg 2400 gtggagctgt tggggtgttg caggtcgaaa tgtctgggat ttttaaattg ggctttaccc 2460 ttgaactgga tgagagcatg gaggtgcaaa gacccatctt ggtgtttttc ttggctaact 2520 ctgataaaca ctttatcaga tgggcagttt actatcttta atagctcaag agctgtttct 2580 ttagagagag aacatttggg ataagtaaga aagacatttt tggctgagac tctaaaactt 2640 ggttgacgag gcatattggt gtcccttaaa cctctacgga attggtgtct ttggtgtccc 2700 atttatacct gggacaccaa tggcattttg gtaattagaa cacctttaat tcaaattccg 2760 acaaatctgg gtccacctaa aggcgggcac cgtattaata tt 2802 //