ID   DQ641718; SV 1; circular; genomic DNA; STD; VRL; 1372 BP.
XX
AC   DQ641718;
XX
DT   03-MAY-2007 (Rel. 91, Created)
DT   21-DEC-2007 (Rel. 94, Last updated, Version 3)
XX
DE   Sida yellow vein Vietnam virus-associated DNA 1, complete sequence.
XX
KW   .
XX
OS   Sida yellow vein Vietnam alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite.
XX
RN   [1]
RP   1-1372
RX   DOI; 10.1099/vir.0.83236-0.
RX   PUBMED; 18089756.
RA   Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.;
RT   "Molecular characterization of begomoviruses and DNA satellites from
RT   Vietnam: additional evidence that the New World geminiviruses were present
RT   in the Old World prior to continental separation";
RL   J. Gen. Virol. 89(Pt 1):312-326(2008).
XX
RN   [2]
RP   1-1372
RA   Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.;
RT   ;
RL   Submitted (18-MAY-2006) to the INSDC.
RL   Institute of Health and Biomedical Innovation, Queensland University of
RL   Technology, 2 George Street, Brisbane, Queensland 4001, Australia
XX
DR   MD5; e2c2ce2d511aef1908b5d4aed8bfc09c.
DR   EuropePMC; PMC2922188; 20678232.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1372
FT                   /organism="Sida yellow vein Vietnam alphasatellite"
FT                   /host="arrow leaf (Sida rhombiforlia, Malvaceae); weed"
FT                   /mol_type="genomic DNA"
FT                   /country="Viet Nam:Hanoi"
FT                   /db_xref="taxon:447597"
FT   gene            68..1015
FT                   /gene="rep"
FT   CDS             68..1015
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="rep protein"
FT                   /db_xref="GOA:A5H1G2"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:A5H1G2"
FT                   /protein_id="ABG26128.1"
FT                   /translation="MPALTSVFWCFTVFFTSSTAPDLIPLFENTHVSYACWQEEESPTT
FT                   KRRHLQGYLQLKGKRTLNQVKALFGDLNPHLEKQRARRTDEARDYCMKEETRVSGPFEF
FT                   GDYCPSGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKLAEEEFQKSTVEIQIPNLKSW
FT                   QLRLKTLLARDPDDRTIFWVYGPTGGEGNPRFARDCIEVGPWFYSRGGSADNVSYQYVG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVVVMSNFLPDF
FT                   EKISSDRVHVIPCIPCGACLKHHITEIKCEEYLD"
XX
SQ   Sequence 1372 BP; 380 A; 263 C; 319 G; 410 T; 0 other;
     acccagcctc ggcaccctct cctcggcacc ctcgtgcgat tcacgtggtt tcttctctct        60
     cttaaatatg cctgccctaa cttcagtgtt ttggtgtttc accgtcttct tcacttcctc       120
     caccgcaccc gacttgattc ctctcttcga gaacactcac gttagttacg cgtgttggca       180
     ggaggaggaa tctccgacga ccaaacgccg tcacctccaa gggtacctgc aattgaaggg       240
     taagagaacc ttaaatcagg tgaaggccct atttggggat ttgaatcccc atctggagaa       300
     gcaaagagct cgccggacgg acgaagctcg tgattattgt atgaaggagg aaactagggt       360
     ttccggtccc tttgaatttg gggattattg ccctagtggt tcacacaaac gccggcaaag       420
     ggaatcggta attagaagtc cggtgagaat ggcggaggag aatccctctg tcttccgacg       480
     agtcaaggcc aaacttgcag aggaagaatt ccagaagagc actgttgaga ttcagattcc       540
     aaatctgaaa tcttggcaat tgcgcctaaa gacgcttctt gcaagggacc cagatgatag       600
     aactatcttc tgggtgtatg gccctactgg tggggaagga aatccacgtt ttgcccgtga       660
     ctgtatagaa gtgggtccct ggttctattc acgtggcggc tctgcggata atgttagtta       720
     tcagtatgta ggatgtttag gaaataatat tgtatttgat attcctcgtg ataagaagga       780
     ttatctgcaa tatagtttaa ttgagatgtt taaggataga ttaatagtta gtaacaagta       840
     tgagcctttg atggctcctc ttgttaattg tattcatgta gtagttatgt ctaattttct       900
     ccctgatttt gagaagatta gtagtgatag ggtccatgta attccttgta ttccatgtgg       960
     tgcttgtctt aagcatcata ttactgaaat aaaatgtgag gaatatttgg attaagtgtt      1020
     gcctcttcta aatataattg ccacaacaaa ataaaattgc cgaaaatatg ttactattat      1080
     tatatgaaag aaaggtgggc cgctaggccc tttgggccga aggcccaatc cataaaaaaa      1140
     ctaattttgc ttctttaaaa aaagaaggaa tgaaatgaaa aaagaatagt ggtcccatat      1200
     atggttactg tttcaatttt gactggtcaa aattaactgt tcattttgcg gaaggactgg      1260
     attgcaaata tctgaaagtt ttaagtttct cgggggtcgt tgtgtaatat tttaaaaacc      1320
     cgtacgggtt cctaggatat aaataacacg tcaccgaggc tggtgtagta tt              1372
//