ID   DQ641717; SV 1; circular; genomic DNA; STD; VRL; 1379 BP.
XX
AC   DQ641717;
XX
DT   03-MAY-2007 (Rel. 91, Created)
DT   21-DEC-2007 (Rel. 94, Last updated, Version 3)
XX
DE   Sida leaf curl virus-associated DNA 1, complete sequence.
XX
KW   .
XX
OS   Sida leaf curl alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite.
XX
RN   [1]
RP   1-1379
RX   DOI; 10.1099/vir.0.83236-0.
RX   PUBMED; 18089756.
RA   Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.;
RT   "Molecular characterization of begomoviruses and DNA satellites from
RT   Vietnam: additional evidence that the New World geminiviruses were present
RT   in the Old World prior to continental separation";
RL   J. Gen. Virol. 89(Pt 1):312-326(2008).
XX
RN   [2]
RP   1-1379
RA   Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.;
RT   ;
RL   Submitted (18-MAY-2006) to the INSDC.
RL   Institute of Health and Biomedical Innovation, Queensland University of
RL   Technology, 2 George Street, Brisbane, Queensland 4001, Australia
XX
DR   MD5; 23c6a0c067f60f2d5b391fd727d9c2be.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1379
FT                   /organism="Sida leaf curl alphasatellite"
FT                   /host="Abutilon indicum, Malvaceae; weed"
FT                   /mol_type="genomic DNA"
FT                   /country="Viet Nam:Thanhhoa"
FT                   /db_xref="taxon:2169843"
FT   gene            80..1027
FT                   /gene="rep"
FT   CDS             80..1027
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="rep protein"
FT                   /db_xref="GOA:A5H1G1"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:A5H1G1"
FT                   /protein_id="ABG26127.1"
FT                   /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRSLSQVKVLFGDLNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT                   GDYCPSGSHKRRQRESVIRSPVRMAEENPSLFRRVKAKIAEEDFQKTAREIQILDLKSW
FT                   QLRLKTLLDRNPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFMPDF
FT                   EKISQDRVHVIPCRPCGVCLKHHMMEIKCDEYVD"
XX
SQ   Sequence 1379 BP; 399 A; 287 C; 323 G; 370 T; 0 other;
     acccagcctc ggttccctct ccttggttcc ctcgtgcgat tcacgtgctc tctctcttct        60
     gtgcccttaa aagaaaaata tgcctacgat tcagtcccaa tggtggtgtt tcactgtttt       120
     cttcctctct gcgaccgccc ccgacctcgt gcctctcttc gagaacacac acgttagcta       180
     cgcctgctgg caagaggaag agtcgcccac gactcgacga cgccacttgc agggctacct       240
     ccagttgaag ggaaaaagaa gcctctcgca ggtgaaggtc ctcttcggtg acctcaaccc       300
     ccatctggag aaacaacgtg ctcgtaagac cgacgaagca cgggactatt gcatgaaaga       360
     agaaactagg gtttccggtc ccttcgaatt tggggattat tgccctagtg ggtcccacaa       420
     acgccggcag agggaatcgg taattcgaag tccggtgaga atggccgagg agaacccatc       480
     tcttttccga cgagtgaagg caaagattgc ggaagaagat ttccagaaga ccgcgcggga       540
     gattcaaatt ttggatttga aatcttggca attgcgcctg aagacgctcc tcgacaggaa       600
     cccagatgac cgcactatct tctgggttta cggccccact ggtggagaag gaaaatcgac       660
     cttcgcgcga gacctgtaca gaagtgggtc ctggttttat acacgtggcg ggtctgctga       720
     taatgttagt tatcagtata tagggtgttt aggaaataac attgtattcg atatccctcg       780
     tgataagaag gattatctgc aatacagttt aatagagatg tttaaggata ggttaatagt       840
     tagtaataag tatgagcctc tgatggctcc tttaattaat tgtatccatg tagttgttat       900
     gtctaatttt atgcctgact ttgagaagat tagtcaggat agagtccatg taatcccctg       960
     tagaccttgt ggtgtttgtc ttaaacacca catgatggaa ataaaatgcg atgaatatgt      1020
     ggattaattt atgttttgtt tcttttaatt aaaagaaaga atgaaatgaa aaaaaataaa      1080
     cgaacaatct ccctcctact tcatttgaat aagaagtgcc gcgcagcggc atttaaaaaa      1140
     aataaaaaca gaaggaaaaa aaaacatata ttatttattt ggtgttacaa aacgacgtcg      1200
     tactcataaa actcatttgg ggcaaaaaca taaatatgtg atagttgcgt gcttgcggaa      1260
     caaaaactga gaaagatgcg gttaagcgga gtaaatattc gggagtctag gtccatgcgc      1320
     tgcaattatt ttgggatcct aggatataaa taccacgtca ccgaggctgg tgtagtatt       1379
//