ID DQ641705; SV 1; circular; genomic DNA; STD; VRL; 2775 BP. XX AC DQ641705; XX DT 03-MAY-2007 (Rel. 91, Created) DT 21-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Tomato leaf curl Vietnam virus segment DNA-A, complete sequence. XX KW . XX OS Tomato leaf curl Vietnam virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2775 RX DOI; 10.1099/vir.0.83236-0. RX PUBMED; 18089756. RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.; RT "Molecular characterization of begomoviruses and DNA satellites from RT Vietnam: additional evidence that the New World geminiviruses were present RT in the Old World prior to continental separation"; RL J. Gen. Virol. 89(Pt 1):312-326(2008). XX RN [2] RP 1-2775 RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.; RT ; RL Submitted (18-MAY-2006) to the INSDC. RL Institute of Health and Biomedical Innovation, Queensland University of RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia XX DR MD5; 9042f9808d2c3c5e5b04fec5a6ad2895. XX FH Key Location/Qualifiers FH FT source 1..2775 FT /organism="Tomato leaf curl Vietnam virus" FT /segment="DNA-A" FT /host="tomato (Lycopersicon esculentum, Solanaceae); crop" FT /mol_type="genomic DNA" FT /country="Viet Nam:Hanoi" FT /note="acronym: ToLCVV" FT /db_xref="taxon:208177" FT gene 160..510 FT /gene="AV2" FT CDS 160..510 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A5H1D4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5H1D4" FT /protein_id="ABG26090.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRIQGASPAELRQPVYQPCCCPHCPRHKQKEVMGESAHV FT PQAQDVHNVQKP" FT gene 320..1093 FT /gene="AV1" FT CDS 320..1093 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:A5H1D0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A5H1D0" FT /protein_id="ABG26089.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYTNRAVAPTVLVTNKRRSW FT VNRPMYRKPKMYTMYKSPDVPRGCEGPCKVQSYEQRHDIAHVGKVICVSDVTRGNGLTH FT RVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1090..1494) FT /gene="AC3" FT CDS complement(1090..1494) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:A5H1D1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A5H1D1" FT /protein_id="ABG26093.1" FT /translation="MDSRTGELITATQAENGVFTWEITNPLYFKITELQNRPFLSDNDI FT LTVRIQFNYNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVNSSHVIKFNLY" FT gene complement(1235..1642) FT /gene="AC2" FT CDS complement(1235..1642) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:A5H1D2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A5H1D2" FT /protein_id="ABG26092.1" FT /translation="MQSSSASPSHCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSAL FT NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQALPIGQRHTDGQNPIQLQ FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI" FT gene complement(1542..2630) FT /gene="AC1" FT CDS complement(1542..2630) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:A5H1D3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A5H1D3" FT /protein_id="ABG26091.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLKNLETPVNKLFIR FT ICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKAYM FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMEVCVSPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNTALKSWAIKNAVFVSITEPL FT YSSTYQSPAQDSEEENNQETED" FT gene complement(2180..2473) FT /gene="AC4" FT CDS complement(2180..2473) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5H1C9" FT /protein_id="ABG26094.1" FT /translation="MELLTCMFSSNSKGNSNVKTKDSSISHPQAGQHISIRTFRQLKAQ FT QMSKPIWTKTETCLIMEFSRSMEDRLEEVASLQTTHMPRQSIQGPKHRPSIY" XX SQ Sequence 2775 BP; 733 A; 566 C; 617 G; 859 T; 0 other; accggatggc cgtgattttt ttcatgtggt ccggacggcc gcgatttttt tcatgtggtc 60 ccccccacta ttatttgtcg gccaatacag acgctccctc agagcttatt tatgtaacgg 120 tcccctataa aacttggtcc ccaagtactc attccaaaca tgtgggatcc gcttttaaac 180 gagtttcccg aaactgttca cggttttagg tgtatgctag cgattaaata tttgcaatta 240 gtagaaaata catactctcc cgatacatta gggtacgatt taatacgtga tttaatctta 300 gtcattcgtg ccagggatta tgtcgaagcg tcccgcagat atagtcattt ccactcccgc 360 atccaaggtg cgtcgccggc tgaacttcga cagcccgtat accaaccgtg ctgttgcccc 420 cactgtcctc gtcacaaaca aaaggaggtc atgggtgaat cggcccatgt accgcaagcc 480 caagatgtac acaatgtaca aaagccctga tgttccacga ggatgtgaag gcccatgtaa 540 agtccagtct tatgaacagc gtcatgatat agcccatgta gggaaggtaa tttgtgtgtc 600 tgatgttaca cgtggtaacg ggttgactca tcgtgttggg aagaggttct gtattaagtc 660 agtttacgtt ttgggtaaga tctggatgga tgagaacatt aagacgaaga atcatactaa 720 tactgtcatg ttctttttag tacgtgatag aagacctttc ggaactcccc aagattttgg 780 tcaggtgttt aacatgtatg ataacgagcc aagtacagcc actgtgaaga acgataacag 840 agatcgtttt caagttcttc gtcgatttca ggcaactgtt actggtggtc agtatgcaag 900 caaggagcaa gcaatagtta ggaagtttat gaaggtgaac aaccatgtga cgtataatca 960 tcaagaggct gcgaagtatg ataaccacac agagaatgct ctgttattgt atatggcatg 1020 tactcatgct agtaatccag tgtatgctac tttaaaaatc aggatctatt tctatgattc 1080 tgttcagaat taataaagat taaattttat tacatgagaa ctgtttacaa atgttgtttg 1140 cgttaatgcg tcccataata cataatttac tgctctaatt acattattca aactaattac 1200 acccaaatta ttgagaaact ttaaaacttg tgtcctaaat actcttaaga aacgaccagt 1260 ctgaaggtgt gagttcgtcc atatccggaa gtccagaaaa cattggtgca tccccagtgc 1320 tttcctcagg ttgtagttga attggattct gaccgtcagt atgtcgttgt ccgataggaa 1380 gggcctgttt tgtagttccg ttatcttgaa atacagggga tttgttatct cccaggtaaa 1440 aacgccattc tctgcctgag ttgcagtgat gagttcccct gtgcgtgaat ccatggttgg 1500 cgcagttaag tgcgctgaaa taagaacaac cacagggaag gtcaatcctc cgtctcctgg 1560 ttattttctt cttcgctatc ctgtgctgga ctttgatagg tacttgagta cagtggctcg 1620 gtgatgctga cgaagactgc attctttatt gcccacgact ttaatgcagt attcttttct 1680 tcgtctaggt attctttata gcttgagttg ggccctggat tgcacaggaa gatagctgga 1740 atgccacctt taatttgaac tggttttccg tactttgtgt tgctttgcca gtccctttgg 1800 gcccccatga attctttgaa atgctttagg tagtgcggat caacgtcatc gatgacgttg 1860 aaccaggcat cattactgta cacttttgga ctcaaatcaa gatgaccaca cagataattg 1920 tgtggaccca atgatcgagc ccacatcgtc ttccccgtcc tgctatcacc ctctattact 1980 atacttattg gtcgtaatgg ccgcgcagcg gaactgacga cgttctctgc agcccattct 2040 tcgagttcct ctgggactcg atcaaacgaa gaagaagaaa aaggcgaaac gcaaacctcc 2100 attggaggag taaaaattct atctaaatta ctatttaagt tatggaattg taaaacaaaa 2160 tctttgggag ctttctccct taatatattg agggccgatg ctttggaccc tgaattgatt 2220 gcctcggcat atgcgtcgtt tgcagactgg caacctcctc tagccgatct tccatcgatc 2280 tggaaaactc catgatcaag cacgtctccg tctttgtcca tataggcttt gacatctgtt 2340 gagcttttag ctgcctgaat gttcggatgg aaatgtgctg acctgcttgg ggatgtgaga 2400 tcgaagaatc tttggttttt acattggaat ttcccttcga attggatgag aacatgcagg 2460 tgaggagttc catcttcgtg gaattctctg cagatgcgga taaatagttt atttactggg 2520 gtttctaggt ttttaagttg ggaaagtgct tcttctttag tgagagagca gtgtggatat 2580 gtgaggaaat aatttttggc atttattctg aatttattag gaggagccat tgactggtca 2640 atcggtgtct cttaaacttg gctatgcaat tggtgtctgg tgtcttattt atatgtggac 2700 accaaaatgg cattatcgta attcccaaaa gaaattcaaa attcaaattg gtaaagcggc 2760 catccgtata atatt 2775 //