ID DQ641701; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC DQ641701; XX DT 03-MAY-2007 (Rel. 91, Created) DT 21-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Lindernia anagallis yellow vein virus segment DNA-A, complete sequence. XX KW . XX OS Lindernia anagallis yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2740 RX DOI; 10.1099/vir.0.83236-0. RX PUBMED; 18089756. RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.; RT "Molecular characterization of begomoviruses and DNA satellites from RT Vietnam: additional evidence that the New World geminiviruses were present RT in the Old World prior to continental separation"; RL J. Gen. Virol. 89(Pt 1):312-326(2008). XX RN [2] RP 1-2740 RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.; RT ; RL Submitted (18-MAY-2006) to the INSDC. RL Institute of Health and Biomedical Innovation, Queensland University of RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia XX DR MD5; 803e5aa6c8d06cca482ce517a3b3b706. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Lindernia anagallis yellow vein virus" FT /segment="DNA-A" FT /host="false pimpernel (Lindernia procumbens, FT Scrophulariaceae); weed" FT /mol_type="genomic DNA" FT /country="Viet Nam:Hanoi" FT /note="acronym: LaYVV" FT /db_xref="taxon:300411" FT gene 120..470 FT /gene="AV2" FT CDS 120..470 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A5H1A9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5H1A9" FT /protein_id="ABG26066.1" FT /translation="MWDPLENEFPETVHGFRCMLAVKYLQAVENTYSPDTKGAEFIRRL FT IVILRSRNYVEATCRYRHLYSELEGTPSSEFRQPVCEPCSCPYCPRHKQKEVMGKQADV FT QEAQNVQDVQKP" FT gene 280..1053 FT /gene="AV1" FT CDS 280..1053 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:A5H1B0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A5H1B0" FT /protein_id="ABG26065.1" FT /translation="MSKRPADIVISTPSSKVRRRLNFDSPYASRAAAPTVLVTSKKRSW FT ASRPMYRKPRMYRMYRSPDVPRGCEGPCKVQSFEKRHDVSHTGTGLCVSDVTRGTGLTH FT RTGKRFCIKSVYILGKIWMDENIKTKNHTNTVLFWLVRDRRPVTTPYGFAEAFNMYDNE FT PSTATIKNDLRDRLQVLHKFGVTVTGGQYASKEQAMVKKFWKINNHVTYNHQEKAAYEN FT HTENALILYMACTHASNPVYATLKIRIYFYDSVNN" FT gene complement(1050..1460) FT /gene="AC3" FT CDS complement(1050..1460) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:A5H1A5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A5H1A5" FT /protein_id="ABG26069.1" FT /translation="MTLDSRTGEPITAAQARNGAFIWTVPNPLYFKITEYEENPFLRPY FT NTVHFQIRFNHNLRKALEIHQCFLNFRVLTPLRAPTSRFLRIFSRHVLGYLNNLGVISL FT NDVIRAVDYVLYDVFNNTLSVSERHIIKFNIY" FT gene complement(1195..1602) FT /gene="AC2" FT CDS complement(1195..1602) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:A5H1A6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A5H1A6" FT /protein_id="ABG26068.1" FT /translation="MQPSSPSRSHCTQVPIKVQHRAAKKKVIRRRRIDLTCGCTYYLSI FT NCHDSGFTHRGTHHCSSSKEWRVYLDGSKSPLFQDNGIRGESISQAIQHSPLPNTVQPQ FT PEESIGDTPMLPQLSGFDSLTSSDLAFLANI" FT gene complement(1502..2590) FT /gene="AC1" FT CDS complement(1502..2590) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:A5H1A7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A5H1A7" FT /protein_id="ABG26067.1" FT /translation="MAPPKRFKIQARNYFLTYPHCSLTKEEALSQLQNIETPTNKKFIK FT ICRELHEDGSPHLHVLVQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYM FT EKDGDTLDWGEFQIDGRSARGGCQNANDACAEALNAGSKEAAMSIIREKLPKDYIFQFH FT NLNSNLDRIFTPPLEVYISPFSSSSFDQVPEELECWVSENVMGAAARPWRPVSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVVDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEERNSALKAWALKNATFVTLEEPL FT YSGTNQSAAPCSEEESNSPTED" FT gene complement(2176..2433) FT /gene="AC4" FT CDS complement(2176..2433) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5H1A8" FT /protein_id="ABG26070.1" FT /translation="MGALISMCSCNSKGNSSARITDSSIWYPQPGQHISIRTFRELNPA FT PTSSPIWRRMETPSTGENSRSTEEVLEEVARTLTTHVQRR" XX SQ Sequence 2740 BP; 737 A; 558 C; 636 G; 809 T; 0 other; accggatggc ccgccgattt ttttaaagtg gggccccgac caatgataat gcgcgctcat 60 cgcttattta gcttgtggtc cctctatata agacttacga agtaagtttc gggttaaaga 120 tgtgggaccc tttagagaac gagtttcctg aaactgttca cggttttagg tgtatgcttg 180 ccgtaaaata cttgcaggct gtagaaaata cgtattctcc agatacgaag ggtgccgaat 240 ttatacgtag gttgatcgta attcttagga gtcgtaacta tgtcgaagcg acctgcagat 300 atcgtcatct ctactccgag ctcgaaggta cgccgtcgtc tgaatttcga cagcccgtat 360 gcgagccgtg cagctgcccc tactgtcctc gtcacaagca aaaagaggtc atgggcaagc 420 aggccgatgt acaggaagcc cagaatgtac aggatgtaca gaagccctga tgtgcccagg 480 ggatgtgaag gcccatgtaa ggtacagtca tttgaaaaga gacatgatgt tagtcatact 540 ggtactgggc tttgcgtttc tgatgttact agaggtactg ggcttactca tcgtactggt 600 aagagatttt gcattaagtc cgtttacata ttgggtaaga tatggatgga tgaaaacatc 660 aagaccaaga accatacgaa caccgtattg ttctggcttg ttagagatag aaggcccgtc 720 actactccat atgggtttgc tgaagcattt aacatgtatg ataatgagcc atctactgcg 780 actattaaga atgaccttcg agacagatta caagttttgc acaagtttgg tgttacggtt 840 actggtggac aatatgcgtc taaggaacag gctatggtga agaaattctg gaagatcaac 900 aatcatgtca cgtacaacca ccaagagaag gctgcttatg agaatcacac tgagaatgcg 960 ttaattttgt atatggcatg tactcatgct tctaatcccg tgtatgctac tctgaaaatc 1020 agaatctatt tttatgattc tgttaacaat taataaatat tgaattttat tatatgtctc 1080 tcggaaactg agagagtgtt gttgaataca tcgtacaata cataatctac tgctcttatt 1140 acatcattaa gtgaaattac acctaaatta tttaaataac ctaatacatg tctactaaat 1200 attcgcaaga aacgcgaggt cggagctcgt aagggagtca aaacccgaaa gttgaggaag 1260 cattggtgta tctccaatgc tttcctcagg ttgtggttga accgtatttg gaagtggact 1320 gtgttgtatg gcctgagaaa tggattctcc tcgtattccg ttatcttgaa atagagggga 1380 tttggaaccg tccaaataaa cgcgccattc cttgcttgag ctgcagtgat gggttcccct 1440 gtgcgtgaat ccagagtcat ggcagttgat ggagaggtaa taggtgcacc cgcacgtcag 1500 gtcaatcctc cgtcggcgaa ttactttctt cttcgctgca cggtgctgca ctttgattgg 1560 tacctgagta caatggctcc tcgagggtga cgaaggttgc attctttaaa gcccaggctt 1620 ttaatgcgct gttccgctct tcgtctaggt actctttata tgatgacgtt gggcctggat 1680 tgcagaggaa gattgttggg atgccacctt taatttgaat gggcttcccg tactttgtgt 1740 tgctttgcca gtccctttgg gcccccatga attctttaaa gtgctttaga tagtgggggt 1800 ctacgtcatc aaccacgttg taccatgcct cgttgctgta caccttgggg ctcaagtcaa 1860 ggtgcccaca caaataatta tgtggaccca aagacctagc ccacatggtc ttgccggtcc 1920 tactatcacc ctcaataaca atactaaccg gtctccaagg ccgcgcagcg gcacccatga 1980 cattttcgga cacccagcac tcaagttctt cgggaacttg atcaaaagaa gaagaagaaa 2040 aaggagaaat ataaacctcc aatggaggtg taaaaatcct atctaaatta ctatttaaat 2100 tatgaaattg aaaaatataa tcttttggga gtttctccct tattattgac atggccgcct 2160 ctttagaacc tgcgtttaac gcctctgcac atgcgtcgtt agcgttctgg caacctcctc 2220 tagcacttct tccgtcgatc tggaattctc cccagtcgag ggtgtctcca tccttctcca 2280 tataggactt gacgtcggag ctggatttag ctccctgaat gttcggatgg aaatgtgctg 2340 acctggttgg ggataccaga tcgaagaatc ggttattcgt gcagacgaat ttcccttcga 2400 attgcacgag cacatggaga tgagggctcc catcttcgtg tagttctcta cagattttaa 2460 tgaatttttt atttgttggg gtttcgatat tctgtaattg ggaaagagct tcttcttttg 2520 ttagagagca atgtggatat gtaaggaaat aatttctggc ttgtatttta aaacgttttg 2580 ggggagccat tgacttggtc aattggagac aatcaaactt gcggaatgaa ttggagacag 2640 gagacaatat ataggtgtct ccaaatggca tattggtaat tatgaattct aatttgaaat 2700 tcaaatttca aattggtaaa gggccatccg ctctaatatt 2740 //