ID DQ641700; SV 1; circular; genomic DNA; STD; VRL; 2754 BP. XX AC DQ641700; XX DT 03-MAY-2007 (Rel. 91, Created) DT 21-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Papaya leaf curl China virus segment DNA-A, complete sequence. XX KW . XX OS Papaya leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RX DOI; 10.1099/vir.0.83236-0. RX PUBMED; 18089756. RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.; RT "Molecular characterization of begomoviruses and DNA satellites from RT Vietnam: additional evidence that the New World geminiviruses were present RT in the Old World prior to continental separation"; RL J. Gen. Virol. 89(Pt 1):312-326(2008). XX RN [2] RP 1-2754 RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.; RT ; RL Submitted (18-MAY-2006) to the INSDC. RL Institute of Health and Biomedical Innovation, Queensland University of RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia XX DR MD5; e586a0bc663052b281b07a8bf4ff0fa4. DR EuropePMC; PMC2816314; 20104645. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Papaya leaf curl China virus" FT /segment="DNA-A" FT /host="tobacco (Nicotiana tabacum, Solanaceae); crop" FT /mol_type="genomic DNA" FT /country="Viet Nam:Hatay" FT /note="acronym: PaLCuCNV" FT /db_xref="taxon:229634" FT gene 131..481 FT /gene="AV2" FT CDS 131..481 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A5H1A0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5H1A0" FT /protein_id="ABG26060.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGHDLIRDL FT ILVIRARDYVEATRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PKAQDVPDVQKP" FT gene 291..1064 FT /gene="AV1" FT CDS 291..1064 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:Q5JZM3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q5JZM3" FT /protein_id="ABG26059.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSW FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1061..1465) FT /gene="AC3" FT CDS complement(1061..1465) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:A5H1A2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A5H1A2" FT /protein_id="ABG26063.1" FT /translation="MDFRTGELLTATQCESGVYTWTIKNPLYFKIIKHHERPFNTNHDI FT ITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLGVISINN FT VIRACNHVLWDVLEKTEYVTHSHIIKFNLY" FT gene complement(1206..1613) FT /gene="AC2" FT CDS complement(1206..1613) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:A5H1A3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A5H1A3" FT /protein_id="ABG26062.1" FT /translation="MRNSSPSTAHCTQVPIKVQHRIAKRRPIRRRRVDLTCGCSYYFGI FT DCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQ FT PEESIGNTPVFSDLPDLDSLTTSDLAFLKSI" FT gene complement(1513..2601) FT /gene="AC1" FT CDS complement(1513..2601) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:A5H1A4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A5H1A4" FT /protein_id="ABG26061.1" FT /translation="MPQPKKFLINAKNYFLTYPHCSLTKEEALSQIPALSTPTNKLFIR FT ICRELHEDGSPHLHVLIQFEGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSTDVKAYM FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINAGSKAAALNILKEKAPKDFVLQFH FT NLNSNLDRIFAPPIEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPL FT YSGTNQSATQNSQEEAHSETES" FT gene complement(2151..2573) FT /gene="AC4" FT CDS complement(2151..2573) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5H199" FT /protein_id="ABG26064.1" FT /translation="MPRIISSLIHTAPLLKKRHFPKSQPYQPRLINYSYVFAGNYTKMG FT LLTCMSSSSSKANSSAKTTDSSISPPQAGQHISIRTFRELKAQQMLKHTWKKTETSLIM FT EFSKSMEDQLEEVANLPTTHMPRQSMQGPKQRPSIY" XX SQ Sequence 2754 BP; 745 A; 552 C; 599 G; 858 T; 0 other; accggatggc cgcgattttt ttaaagtggt ccccaccatt aacaaatgtc ccccactaaa 60 aatgctccct caaagcctat ttaattcaaa tccattataa atacttggtc cccaagtagt 120 cacgtcaaac atgtgggatc ctttactaaa cgagtttccc gaaactgtac atggttttag 180 gtgtatgcta gcaattaagt atttgcaact ggtagaaaat acgtactctc cagatacatt 240 agggcacgat ttaattcgcg atttaatttt agttattcgt gctagagatt atgtcgaagc 300 gacccgccga tatagtcatt tccactcccg catccaaggt gcgtcgccgg ctgaatttcg 360 acagcccgta tgtcagccgt gctgctgccc ccactgtcct cgtcacaaac aaaaggaggt 420 catgggtgaa tcggcccatg taccgaaagc ccaggatgta ccggatgtac aaaagccctg 480 atgttcctcg tggttgtgag ggaccatgta aggtccagtc gtatgaacag cgtcatgatg 540 tagctcacgt aggtaaggtc atttgtgtgt cggatgttac tcgtggtaat ggtttgacgc 600 atcgagtcgg taagaggttt tgtgttaaat ctgtctatgt tttgggtaag atatggatgg 660 atgagaacat taagaccaag aatcatacca acacagtcat gtttttttta gttcgtgata 720 ggagaccttt tggcactccc caggattttg gtcaggtgtt taacatgtac gataatgagc 780 cgagtacagc tactgtgaag aatgacaaca gggatcgttt tcaagttctc cgtcgttttc 840 aggcgactgt tactggtggc caatatgcaa gtaaggagca agcaatagtc aggaaattca 900 tgaaggtgaa caaccatgtg acttataatc atcaagaggc tgcgaagtat gacaaccaca 960 cagagaatgc tttgttattg tatatggcat gtactcatgc tagtaatcca gtgtatgcaa 1020 ctttgaagat cagaatctat ttctatgatt ctgttcagaa ttaataaaga ttgaatttta 1080 ttatatgaga atgtgttaca tattctgttt tctccaatac atcccataat acatgattac 1140 atgctctaat tacattgtta atactaatta cacccaaatt atctaaatat ttcatacatt 1200 gaaccctaaa tactcttaag aaacgccaag tctgaggttg taagcgagtc cagatctgga 1260 agatcagaaa acactggtgt attcccaatg ctttcctcag gttgtggttg aattgtattt 1320 ggatcgttat gatgtcgtgg ttggtgttga atggtctctc gtggtgcttg attatcttga 1380 aatatagggg atttttgatc gtccaggtat acacgccact ctcgcattga gttgcagtga 1440 gtaattcccc tgtgcgaaaa tccatgattt gcacaatcta tgccgaagta gtatgagcac 1500 ccgcacgtta gatcaactct ccgtctccga atgggcctcc tcttggctat tctgtgttgc 1560 actttgattg gtacctgagt acaatgggct gttgagggtg atgaattccg cattctttaa 1620 tgcccaatct tttaaagctg aatttttatc ctcattcaag tactctttat atgatgatgt 1680 tgggcctgga ttgcaaagga agatagttgg gattccacct ttaatttgaa ttggtttccc 1740 gtacttagtg ttgctttgcc agtccctttg ggcccccatg aattctttaa agtgctttaa 1800 atagtggggg tctacgtcat caatgacgtt ataccaagca tcattactgt atacttttgg 1860 gcttagatca agatgtccac acaaataatt gtgtggtccc agtgatctgg cccacattgt 1920 tttacctgta cgactatcac cttctatcac aatactcttg ggtctccatg gccgcgcagc 1980 ggcaccactc acattttcag aaacccactc ttcaagttct tctggaactt gatcgaatga 2040 agaagaaaga aaaggacaaa caaacacctc tataggaggt gcaaaaatcc tgtctaaatt 2100 actatttaaa ttatgaaact gtaaaacaaa atctttagga gccttctcct ttaatatatt 2160 gagggccgct gctttggacc ctgcattgat tgcctcggca tatgcgtcgt tggcagattg 2220 gcaacctcct ctagctgatc ttccatcgat ttggaaaact ccatgatcaa ggacgtctcc 2280 gtctttttcc atgtatgctt taacatctgt tgagctttta gctccctgaa tgttcggatg 2340 gaaatgtgct gacctgcttg gggaggtgag atcgaagaat ctgttgtttt ggcacttgaa 2400 tttgccttcg aactggatga ggacatgcag gtgaggagac ccatcttcgt gtagttccct 2460 gcaaatacgt atgaataatt tattagtcgg ggttgataag gctgggattt gggaaagtgc 2520 ctcttcttta gtaagggagc agtgtggata agtgaggaaa taattcttgg catttattaa 2580 aaattttttt ggctgaggca tattgactgg tcaatcgggt cctctcaaac ttggctatgc 2640 aatcggggaa tgggtcctta tttatagttc aggacctaaa tggcattatc gtaattccca 2700 aaagaaattc aaaattcgaa ttttgaatcc aaaagcggcc atccgtataa tatt 2754 //