ID DQ641697; SV 1; circular; genomic DNA; STD; VRL; 2745 BP. XX AC DQ641697; XX DT 03-MAY-2007 (Rel. 91, Created) DT 21-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Tomato yellow leaf curl Vietnam virus segment DNA-A, complete sequence. XX KW . XX OS Tomato yellow leaf curl Vietnam virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2745 RX DOI; 10.1099/vir.0.83236-0. RX PUBMED; 18089756. RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.; RT "Molecular characterization of begomoviruses and DNA satellites from RT Vietnam: additional evidence that the New World geminiviruses were present RT in the Old World prior to continental separation"; RL J. Gen. Virol. 89(Pt 1):312-326(2008). XX RN [2] RP 1-2745 RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.; RT ; RL Submitted (18-MAY-2006) to the INSDC. RL Institute of Health and Biomedical Innovation, Queensland University of RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia XX DR MD5; 7613a3799328a5bf8dee054fb5b2f7c3. DR EuropePMC; PMC2816314; 20104645. XX FH Key Location/Qualifiers FH FT source 1..2745 FT /organism="Tomato yellow leaf curl Vietnam virus" FT /segment="DNA-A" FT /host="tomato (Lycopersicon esculentum, Solanaceae); crop" FT /mol_type="genomic DNA" FT /country="Viet Nam:Hanoi" FT /note="acronym: TYLCVNV" FT /db_xref="taxon:390442" FT gene 130..480 FT /gene="AV2" FT CDS 130..480 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A5H185" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5H185" FT /protein_id="ABG26042.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESSHV FT PQAQDVQNVQKP" FT gene 290..1063 FT /gene="AV1" FT CDS 290..1063 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:A5H186" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A5H186" FT /protein_id="ABG26041.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVNRAVAPTVLVTNKRRSW FT VNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKRFCIKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1060..1464) FT /gene="AC3" FT CDS complement(1060..1464) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:A5H181" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A5H181" FT /protein_id="ABG26045.1" FT /translation="MDFRTGELLTATQCENGVYTWTIKNPLYFKITKHHERPFNTNHDI FT IKIQIQFNHNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLDNLGVISINN FT VIRACDHVLWDVLENTEYVTHSNIIKFNLY" FT gene complement(1205..1612) FT /gene="AC2" FT CDS complement(1205..1612) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:A5H182" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A5H182" FT /protein_id="ABG26044.1" FT /translation="MQNSSPSTAHCTQVPIKVQHRIAKKRPVRRRRVDLTCGCSYYFGI FT DCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPREAIQHQPRHHKDPNTIQPQ FT PEESVGNTPVFSNLPDLDSFTSSDLAFLKSI" FT gene complement(1512..2600) FT /gene="AC1" FT CDS complement(1512..2600) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:A5H183" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A5H183" FT /protein_id="ABG26043.1" FT /translation="MAPPKRFQINAKNYFLTYPQCSLTKEEALSQLQNLNTPTNKKYIK FT ICRELHEDGSPHLHVLVQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGEFQIDGRSARGGQQSANDAYAQALNAGSKSEALNVIKELAPKDYVLQFH FT NLNANLDRIFTPPLEVYISPFSSSSFDRVPEELEEWAAENVVSSAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFVTLNSPL FT YSGTNQSATQNSQEEACSETES" FT gene complement(2153..2443) FT /gene="AC4" FT CDS complement(2153..2443) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5H184" FT /protein_id="ABG26046.1" FT /translation="MGLLISTCLSSSKGNTNARITDSSTWYPQPGQRISIQTFRELNRA FT PTSSPTSTRTETQLNGENFRSTDDLQGEVNNQPTTLTPRRLTQAVSRRLLM" XX SQ Sequence 2745 BP; 726 A; 551 C; 609 G; 859 T; 0 other; accggatggc cgcgattttt tttatgtggt ccccccactc ttatttgtcg gccaatagag 60 acgctccctc agagcttatt tatttaacgg ccccctataa aacttggtcc ccaagtactc 120 atttcaaaca tgtgggatcc gcttttaaac gaatttcccg aaaccgttca cggttttagg 180 tgtatgctag cgattaaata tttgcaatta gtagaaaata catactctcc ggatacatta 240 gggtacgatt taattcgtga tttaatttta gttattcgtg ccagggatta tgtcgaagcg 300 tcccgcagat atagtcattt ccactcccgc atccaaggtg cgtcgccggc tgaatttcga 360 cagcccgtat gtcaaccgtg ctgttgcccc cactgtcctc gtcacaaaca aaaggaggtc 420 atgggtgaat cgtcccatgt accgcaagcc caagatgtac agaatgtaca aaagccctga 480 tgttccacga ggatgtgaag gcccatgtaa agtccagtct tatgaacagc gtcatgatgt 540 agcccatgta gggaaggtaa tttgtgtgtc tgatgttaca cgtggtaacg ggttgactca 600 tcgtgttggt aagaggttct gtattaagtc agtttatgtt ttgggtaaga tctggatgga 660 tgagaacatt aagacgaaga atcatactaa tacggtcatg ttctttttag tacgtgatag 720 aagacctttt ggaactcccc aagattttgg tcaggtgttt aacatgtatg ataacgagcc 780 aagtacagcc accgtgaaga acgataacag agatcgtttt caagtgcttc gtcgatttca 840 ggcaactgtt actggtggcc agtatgcgag caaggagcaa gcaatagtta ggaagtttat 900 gaaggtgaac aaccatgtga cgtataatca tcaagaggct gcgaagtatg acaatcacac 960 agagaatgct cttttgttgt atatggcatg tactcatgct agtaatccag tgtatgctac 1020 tttgaaaatc agaatctatt tctatgattc tgttcagaat taataaagat tgaattttat 1080 tatatttgaa tgtgttacat attctgtgtt ttccaataca tcccataata catgatcaca 1140 tgctctaatt acattgttaa tactaattac acccaaatta tctaagtatt tcatacattg 1200 aaccctaaat actcttaaga aacgccaagt ctgaggacgt aaacgagtcc agatctggaa 1260 gattagaaaa cactggtgta ttcccaacgc tttcctcagg ttgtggttga attgtatttg 1320 gatctttatg atgtcgtggt tggtgttgaa tggcctctcg tggtgcttgg ttatcttgaa 1380 atatagggga tttttgatcg tccaggtata cacgccattc tcgcattgag ttgcagtgag 1440 taattcccct gtgcgaaaat ccatgatttg cgcaatctat gccgaagtag tatgagcacc 1500 cgcacgttag atcaactctc cgtctccgaa caggcctctt cttggctatt ctgtgttgca 1560 ctttgattgg tacctgagta caatgggctg ttgagggtga cgaattctgc attctttaat 1620 gcccaatctt ttaaagcaga atttttatcc tcattcaagt actctttata tgatgatgtt 1680 gggcctggat tgcaaaggaa gatagttggg attccacctt taatttgaat tggtttcccg 1740 tacttagtgt tgctttgcca gtccctttgg gcccccatga attctttaaa gtgctttagg 1800 tagtggggat ctacgtcatc aatgacgtta taccaagcat cattactgta tacttttggg 1860 cttagatcaa ggtgtccgca taaataatta tgtgggccta atgacctagc ccacattgtt 1920 ttccccgtcc gactatcccc ttcgataact atacttatcg gtcgtaaagg ccgcgcagcg 1980 gaactgacga cgttctcggc agcccactcc tcgagttctt ctgggactcg atcaaaagaa 2040 gaagaagaaa aaggcgaaat ataaacctcc aatggaggtg taaaaatcct gtctaaattg 2100 gcatttaaat tatgaaactg taacacataa tctttaggag ctagctcctt aattacatta 2160 agagcctccg acttactgcc tgcgttaagc gcctgggcgt aagcgtcgtt ggctgattgt 2220 tgacctcccc ttgcagatcg tccgtcgatc tgaaattctc cccattcaat tgtgtctccg 2280 tccttgtcga tgtaggactt gacgtcggag ctcgatttag ctccctgaat gtttggatgg 2340 aaatgcgctg acctggttgg ggataccagg tcgaagaatc tgttattctg gcatttgtat 2400 ttcccttcga actggacaag cacgtggaga tgaggagacc catcttcgtg aagctctctg 2460 cagattttga tgtatttttt attcgttggg gtgtttaggt tttgtaattg ggaaagtgcc 2520 tcttctttag taagggagca ttgtggataa gtgagaaaat aattcttggc atttatttgg 2580 aaacgctttg ggggtgccat tgacttggtc aatcggtact catcaaactt ctctatgcaa 2640 ttggggaatg gtactcaata tatagttgag taccaaatgg cattatcgta attctcaaag 2700 gtaatttgaa attcaaattg gtaaagcggc catccgtata atatt 2745 //