ID DQ641694; SV 1; circular; genomic DNA; STD; VRL; 2761 BP. XX AC DQ641694; XX DT 03-MAY-2007 (Rel. 91, Created) DT 21-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Spilanthes yellow vein virus segment DNA-A, complete sequence. XX KW . XX OS Spilanthes yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2761 RX DOI; 10.1099/vir.0.83236-0. RX PUBMED; 18089756. RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.; RT "Molecular characterization of begomoviruses and DNA satellites from RT Vietnam: additional evidence that the New World geminiviruses were present RT in the Old World prior to continental separation"; RL J. Gen. Virol. 89(Pt 1):312-326(2008). XX RN [2] RP 1-2761 RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.; RT ; RL Submitted (18-MAY-2006) to the INSDC. RL Institute of Health and Biomedical Innovation, Queensland University of RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia XX DR MD5; 512c106366103242ce97520d9a958da0. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Spilanthes yellow vein virus" FT /segment="DNA-A" FT /host="para cress (Spilanthes paniculata, Asteraceae); FT weed" FT /mol_type="genomic DNA" FT /country="Viet Nam:Dalat" FT /note="acronym: SpYVV" FT /db_xref="taxon:390439" FT gene 163..510 FT /gene="AV2" FT CDS 163..510 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A5H164" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5H164" FT /protein_id="ABG26024.1" FT /translation="MWDPLLHPFPETVHGFRCMLAVKYLQLVESTYSPDTLGFDLIRDL FT ITVIRCSNYVEATSKYCHFHALIEGTSETQLRQPVCEPCLCPHCPRHKGSGMDQQTYVP FT KASDVQNVQKP" FT gene 323..1093 FT /gene="AV1" FT CDS 323..1093 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:A5H165" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A5H165" FT /protein_id="ABG26023.1" FT /translation="MSKRPASIVISTPSSKVRRRLNFDSPYANRASAPIVRVTKGQVWT FT NRPMFRKPRMYRMFRSPDVPRGCEGPCKVQSYDSKHDIGHLGKVLCVSDVTRGNGLTHR FT TGKRFCVKSLYVIGKIWMDEKIKNKNHTNTVMFWLVRDRRPSGVPQDFQQVFNVYDNEP FT ATATVKNDSRDRYQVLRRFQSTVTGGQYASKEQAIIRKFIRVNTHVTYNHQEDAKYANH FT TENALLLYMCCTHHENPVYGTLKIRSYFYDSVSN" FT gene complement(1090..1494) FT /gene="AC3" FT CDS complement(1090..1494) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:A5H166" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A5H166" FT /protein_id="ABG26027.1" FT /translation="MDSRTGELITAAQAENGVYIWTITNPLYFKIINHENRPFLMETDI FT ITIRIQFNYNLRKALGIHKCFLTYRVWTSLQPQTSRFLRVFKTQLMMYLNNLGVISVNN FT VIRAVKYVLYERLNGTVDIEETNDIKYNIY" FT gene complement(1208..1642) FT /gene="AC2" FT CDS complement(1208..1642) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:A5H167" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A5H167" FT /protein_id="ABG26026.1" FT /translation="MRSSSPSTSHCTLPNIKVQHREAKKKTIRRRRIDLKCGCTYYLSI FT NCVNHGFSHRGTYHCSSSREWRLYLDNNKSPIFQDHQPREPTIPHGDRHHNNKDTIQLQ FT PSESIGDTQMFSNLSSLDELTTSDIAFLESLQDPINDVFE" FT gene complement(1542..2630) FT /gene="AC1" FT CDS complement(1542..2630) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:A5H168" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A5H168" FT /protein_id="ABG26025.1" FT /translation="MAPNNRFRVSARNYFLTYPHCSLTKEETLSQLSNLVCPTNKKFIK FT ICRELHEDGSPHLHVLIQFEGKYVCTNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQDLNDLGAEVWNATSVNAAKQLVKEKQPWTYLLQRH FT NIVANIEKEFEKPPEPFVCPFPTTAFDNVPTMMKVWAQEFVTNSAARPLRPKGIVIEGE FT SRTGKTLWARSLGPHNYLCGHLDLNPNVFSNDAWYNVIDDVDPHYLKHYKEFMGSQTNW FT QSNRKYGKPVQIKGGIPTIFLCNPGPTSSYTEFLEEEKNAKLKRWSNYNAIFITLNEPL FT YSTEYQGPAPRGEEEDHQETED" FT gene complement(2201..2473) FT /gene="AC4" FT CDS complement(2201..2473) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5H163" FT /protein_id="ABG26028.1" FT /translation="MGALISTCLFNSRGNTSARINDSSTLYPQPGQHISIRTYRELNQA FT PMSSPISTRTETHWNGENSRSTEGVLEEANRILTILVQRSGTQHP" XX SQ Sequence 2761 BP; 701 A; 556 C; 612 G; 892 T; 0 other; accggacggc cgcgattttt tatacatggc cccaccacgc attaacaaag gaaaaaggaa 60 aaaatggtcc cctgggtttt atccaatcag atcttttatt caaacgttaa taataaatgt 120 ggtcccctat taaatgcgct ccccccaagc aaaattcaaa aaatgtggga tccgctcctc 180 catccttttc cagaaaccgt acatggtttc cgttgtatgt tagccgtaaa gtatttacag 240 ttagtagagt ctacgtattc cccagatacg ttagggtttg atcttatacg tgatttaatt 300 acagtaatta ggtgtagtaa ctatgtcgaa gcgaccagca agtattgtca tttccacgcc 360 ctcatcgaag gtacgtcgga gactcaactt cgacagcccg tatgcgaacc gtgcctctgc 420 ccccattgtc cgcgtcacaa agggtcaggt atggaccaac agacctatgt tccgaaagcc 480 tcggatgtac agaatgttca gaagccctga tgttcccaga ggttgtgagg gtccttgtaa 540 ggttcagtct tatgattcta agcatgacat tggtcatctt ggtaaggtac tttgtgtttc 600 ggatgttacc cgtggtaacg gccttaccca tcgtactggt aaacgttttt gtgttaagtc 660 gttgtatgtt attgggaaga tatggatgga tgagaagatt aagaataaga atcatactaa 720 caccgttatg ttctggttag ttagagatag aaggccttca ggtgtacctc aggattttca 780 acaggttttt aatgtttatg ataatgaacc tgcgacagct actgtgaaga acgattctcg 840 agatcgttac caggttttac ggcgttttca gtctactgtt actggtggtc agtatgcttc 900 taaagaacag gctattattc ggaagtttat ccgtgtaaac acacatgtga cgtataatca 960 tcaagaggat gcgaaatatg ccaatcatac ggagaatgct ttgttattgt atatgtgttg 1020 tactcatcat gagaaccctg tgtatggaac tctaaagatc cgcagttatt tttacgactc 1080 ggtatctaat taataaatgt tgtattttat atcatttgtc tcttcgatat caactgtacc 1140 gttaagacgt tcatacaata catatttaac tgctctaatt acattattaa cagaaattac 1200 acctaaatta ttcaaataca tcattaattg ggtcttgaag actctcaaga aacgcgatgt 1260 ctgaggttgt aagctcgtcc agactcgata ggttagaaaa catttgtgta tccccaatgc 1320 tttccgaagg ttgtagttga attgtatcct tattgttatg atgtctgtct ccatgaggaa 1380 tggtcggttc tcgtggttga tgatcttgaa atatagggga tttgttattg tccagatata 1440 gacgccattc tctgcttgag ctgcagtgat aagttcccct gtgcgagaat ccatggttga 1500 cacagtttat tgataggtag tatgtgcaac cacacttcag gtcaatcctc cgtctcctga 1560 tggtcttctt cttcgcctct cggtgctgga ccttgatatt cggtagagta caatggctcg 1620 ttgagggtga tgaagatcgc attgtaatta gaccacctct tgagctttgc gttcttttcc 1680 tcttctaaaa actctgtata tgaagaggtt ggacctggat tgcagaggaa gatagtgggt 1740 atcccacctt taatttgaac cggctttccg tactttctgt tgctttgcca gtttgtttgg 1800 gaccccatga attctttata gtgctttaga tagtgcgggt cgacgtcatc tattacgtta 1860 taccatgcgt cgttagagaa cacattaggg tttaagtcta aatgtccaca taagtaatta 1920 tgtggcccta atgacctggc ccacaacgtt ttcccggttc gactttcacc ttcaatgaca 1980 atgcctttgg gccttagagg ccgcgcagcg gaatttgtca caaattcttg agcccatacc 2040 ttcatcatgg tcgggacatt gtcaaatgct gtcgtgggaa atggacacac aaacggttct 2100 ggtggtttct cgaattcttt ttcgatattt gccactatgt tgtgccgttg taatagatat 2160 gtccacggtt gcttctcctt tactaattgc ttggcagcat ttacggatgt tgcgttccag 2220 acctctgcac caagatcgtt aagatcctgt tggcctcctc tagcactcct tccgtcgatc 2280 tggaattctc cccattccag tgtgtctccg tccttgtcga tataggactt gacatcggag 2340 cttgatttag ctccctgtat gttcggatgg aaatgtgttg accgggttgg ggatacaagg 2400 tcgaagaatc gtttattcgt gcagacgtat ttcccctcga attgaataag cacgtggaga 2460 tgagggctcc catcttcgtg tagctctctg cagattttaa tgaatttttt atttgttgga 2520 caaactaggt tacttaattg ggaaagtgtt tcttctttgg tgagagagca gtgtgggtat 2580 gtaagaaaat aatttctggc tgaaactcta aatctgttat tcggagccat ttattgctct 2640 ggattggtga cactctgagc tcgaagagta taatagtatt ggtgactggt gtacaatata 2700 tagaggtgag taaaagcctc aaattccacg tggaatctat cgcggccgtc cttataatat 2760 t 2761 //