ID DQ641692; SV 1; circular; genomic DNA; STD; VRL; 2767 BP. XX AC DQ641692; XX DT 03-MAY-2007 (Rel. 91, Created) DT 21-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Clerodendrum golden mosaic virus segment DNA-A, complete sequence. XX KW . XX OS Clerodendron golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2767 RX DOI; 10.1099/vir.0.83236-0. RX PUBMED; 18089756. RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.; RT "Molecular characterization of begomoviruses and DNA satellites from RT Vietnam: additional evidence that the New World geminiviruses were present RT in the Old World prior to continental separation"; RL J. Gen. Virol. 89(Pt 1):312-326(2008). XX RN [2] RP 1-2767 RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.; RT ; RL Submitted (18-MAY-2006) to the INSDC. RL Institute of Health and Biomedical Innovation, Queensland University of RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia XX DR MD5; a735abc0d0d4068fe403935667230cbf. XX FH Key Location/Qualifiers FH FT source 1..2767 FT /organism="Clerodendron golden mosaic virus" FT /segment="DNA-A" FT /host="Glory bower (Clerodendrum philippinum, Verbenaceae); FT weed" FT /mol_type="genomic DNA" FT /country="Viet Nam:Sonla" FT /note="acronym: ClGMV" FT /db_xref="taxon:390438" FT gene 100..459 FT /gene="AV2" FT CDS 100..459 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:A5H160" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A5H160" FT /protein_id="ABG26018.1" FT /translation="MLTSHTGLSDMWDPLVNDFPETVHGLRCMLAVKYLKYVESTYSPD FT TLGYDLIRDLILVVRAKNYGEASRRYNHFHTRLQGSTEAELRQPVSEPCACPHCPRHTK FT TVMGQSAHVQEAQDI" FT gene 290..1060 FT /gene="AV1" FT CDS 290..1060 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:A5H155" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:A5H155" FT /protein_id="ABG26017.1" FT /translation="MAKRAGDIIISTPASKVRRRLNFDSPYQNRVPVLTARGTRKQLWA FT NRPMYRKPRIFKLYRGLDVPRGCEGPCKVQSFEQRHDVAHVGKVICISDVTRGNGITHR FT VGKRFCIKSVYVLGKVWMDENIKVKNHTNSVMFFVVRDRRPYGTPQEFGQVFNTYDNEP FT STATVKNDLRDRFQVIRKFYATVTGGQYASREQTLVRRFIRVNNYVVYNHQEAAKYENH FT TENALLLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1057..1461) FT /gene="AC3" FT CDS complement(1057..1461) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:A5H156" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:A5H156" FT /protein_id="ABG26021.1" FT /translation="MDSRTGEIITATQAESGVFIWEVPNPLYFKIISHLDRPMFRPHDI FT ITIQIQFNHNLRRALGLHKCFLSFRIYTRLNPPTGRFLRVFKNECMKYLDSLGVISINN FT VIRTVRHVLYDVIAGTLDVIDHHSVNFKYY" FT gene complement(1202..1606) FT /gene="AC2" FT CDS complement(1202..1606) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:A5H157" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A5H157" FT /protein_id="ABG26020.1" FT /translation="MQSSSHSQSLSIQVPIKVQHKIAKKRSRRRRIDLECGCSYFLSIN FT CHNHGFTHRGNHHCNSSGEWRFYLGGSKSPIFQNHQPPRQANVPTTRHHHHPDTIQPQP FT TESTGTSQMLPILSDLHTFESTDWEIFKSL" FT gene complement(1527..2594) FT /gene="AC1" FT CDS complement(1527..2594) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:A5H158" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:A5H158" FT /protein_id="ABG26019.1" FT /translation="MPPPTKFRINAKNYFLTYPQCSLTKEETLARLLAIVTPTNKKFIK FT ICRELHEDGSPHLHVLMQFEGKFQCKNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYM FT DKDGDTLEWGEFQIDGRSARGGPQTANDAYAQALNTGSKHEALKVIKELAPKDFILQFH FT NLNSNLDRIFVQEVPIYRSPFLSSSFNQVPEELELWVSENVMSAAARPLRPKSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPGASYIQFLNEEKQSALKTWALKNAEFVTLTEPL FT YSSTNQGPTQDCQET" FT gene complement(2135..2566) FT /gene="AC4" FT CDS complement(2135..2566) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A5H159" FT /protein_id="ABG26022.1" FT /translation="MPKIIFSLIHNAHSQKKKLLPDFWQLLHQPIKNSSRFAENSTKMG FT ALISTFLCNSRANSNARINDSSIWYPQQDQPTSILTFKGQNRVPTSSPIWIRTGTHWNG FT ENSRSTGDLHEEVHRQLMMLTPRRLTLAVSTKLLRSLKN" XX SQ Sequence 2767 BP; 753 A; 540 C; 627 G; 847 T; 0 other; accgggtggc cgcggggtct ctttaaagtg ggtcccacct attaaaacaa ccaatccgca 60 tagctcctct gagcttgtta gtcaaaaggt ggcctataaa tgttgaccag tcatactgga 120 ttgtcagaca tgtgggatcc attggtgaat gattttcctg agaccgtaca tggtcttagg 180 tgtatgctag ctgtcaaata cctgaaatac gttgaaagta cgtattcccc tgatacactc 240 ggatacgatc taatccgtga tctgatactt gttgtccgtg ccaaaaatta tggcgaagcg 300 agccggagat ataatcattt ccacacccgc ctccaaggtt cgacggaggc tgaacttcga 360 cagcccgtat cagaaccgtg tgcctgtcct cactgcccga ggcacacgaa aacagttatg 420 ggccaatcgg cccatgtaca ggaagcccag gatatttaaa ttatatagag gccttgatgt 480 gcctcgtgga tgtgaaggcc catgtaaagt ccagtcattt gagcaacgcc atgatgtggc 540 ccatgtaggg aaggtcatat gtatatctga tgttacacgt gggaatggta ttactcatcg 600 cgttggtaaa cgtttttgta ttaagtccgt atatgttttg ggcaaggtct ggatggatga 660 aaacatcaag gtcaagaatc acacgaatag tgtaatgttt tttgttgtac gtgatcgaag 720 gccgtatggt acccctcaag aatttggcca agtatttaat acttatgaca acgagccaag 780 tactgctact gtgaagaatg atctcagaga tagatttcaa gtgatcagga agttctatgc 840 aactgtgaca ggtggtcagt atgccagtag agaacagaca ttagtcagga gattcattag 900 agttaataat tatgttgtgt ataatcatca ggaggctgct aagtacgaga atcatacaga 960 gaatgcattg ttgttgtata tggcatgtac acatgcctca aatcctgtgt atgctacgtt 1020 aaaaatacga atctattttt atgattcggt aacaaattaa taatatttga aattcaccga 1080 atggtggtcg attacatcca aagtaccagc tattacatca tacaaaacat gtcttacagt 1140 cctaattaca ttgttaattg aaataacccc taaactatct aagtacttca tacattcatt 1200 tttaaagact cttaaaaatc tcccagtcgg tggattcaaa cgtgtgtaga tccgaaagga 1260 taggaagcat ttgtgaagtc ccagtgctct ccgtaggttg tggttgaatt gtatctggat 1320 ggtgatgatg tcgtgtggtc ggaacattgg cctgtcgagg tggctgatga ttttgaaata 1380 taggggattt ggaacctccc agataaaaac gccactctcc gcttgagttg cagtgatgat 1440 ttccccggtg cgtgaatcca tggttgtggc aattgattga taagaaatat gagcagccgc 1500 actccaaatc tatccttcgt cgtctactac gtttcttggc aatcttgtgt tggaccttga 1560 ttggtacttg aatagagagg ctctgtgagt gtgacgaact ctgcattttt caaagcccaa 1620 gtctttagtg cggattgctt ttcttcattt aaaaattgaa tatagctggc accgggccct 1680 ggattgcaga gaaagatagt gggaatccca cctttaattt gaactggctt tccgtatttt 1740 gtattgcttt gccagtctct ttgggccccc atgaattcct taaagtgctt taaatagtgg 1800 gggtcgacat catcaatgac gttataccat gcgtcattac tgtaaacctt gggactcaag 1860 tctaggtgac cacataaata attatgtggt ccaagtgatc tggcccacat tgttttccct 1920 gttcgactat cgccctcaag aacaattgat ttaggtctta atggccgcgc agcggcactc 1980 atcacatttt ctgaaaccca gagttcaagt tcttctggaa cttgattaaa agaagatgaa 2040 agaaatgggg acctataaat aggcacctct tgtacaaata tcctatctaa atttgaattt 2100 aaattgtgaa attgtaaaat aaaatcctta ggggctaatt ctttaatgac cttaagagct 2160 tcgtgcttac tgccagtgtt aagcgcctgg gcgtaagcat cattagctgt ctgtggacct 2220 cctcgtgcag atctcccgtc gatctggaat tctccccatt ccagtgtgtc cccgtcctta 2280 tccatatagg acttgacgtc ggaactcgat tttgcccctt gaatgttagg atggaagtgg 2340 gctgatcttg ttggggatac cagatcgaag aatcgttgat tcttgcattg gaatttgccc 2400 tcgaattgca taagaacgtg gagatgaggg ctcccatctt cgtggagttc tctgcaaatc 2460 ttgatgaatt ttttattggt tggtgtaaca attgccagaa gtctggcaag agtttcttct 2520 tttgtgagtg agcattgtgg ataagtgaga aaataatttt tggcatttat tctgaatttt 2580 gttggaggag gcatgttgac ttggtcaact ggtgtctcgc aaactgggtg atatatattg 2640 gtgtctgggg tcctataaat acttagacac ctaatggcac attcgtaaat atcttaccca 2700 cttttgaatt tgaatttcaa atttgaattt aatttcggct ccaaaaagcg gccacccgta 2760 taatatt 2767 //