ID DQ641689; SV 1; circular; genomic DNA; STD; VRL; 2649 BP. XX AC DQ641689; XX DT 03-MAY-2007 (Rel. 91, Created) DT 21-SEP-2010 (Rel. 106, Last updated, Version 3) XX DE Corchorus golden mosaic virus segment DNA-B, complete sequence. XX KW . XX OS Corchorus golden mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2649 RX DOI; 10.1099/vir.0.83236-0. RX PUBMED; 18089756. RA Ha C., Coombs S., Revill P., Harding R., Vu M., Dale J.; RT "Molecular characterization of begomoviruses and DNA satellites from RT Vietnam: additional evidence that the New World geminiviruses were present RT in the Old World prior to continental separation"; RL J. Gen. Virol. 89(Pt 1):312-326(2008). XX RN [2] RP 1-2649 RA Ha C.V., Coombs S., Revill P.A., Harding R.M., Vu M.T., Dale J.L.; RT ; RL Submitted (18-MAY-2006) to the INSDC. RL Institute of Health and Biomedical Innovation, Queensland University of RL Technology, 2 George Street, Brisbane, Queensland 4001, Australia XX DR MD5; 73e6fe93a6e756c7322512040e5d12e2. XX FH Key Location/Qualifiers FH FT source 1..2649 FT /organism="Corchorus golden mosaic virus" FT /segment="DNA-B" FT /host="jute mallow (Corchorus capsularis)" FT /mol_type="genomic DNA" FT /country="Viet Nam:Hanoi" FT /note="acronym: CoGMV" FT /db_xref="taxon:390436" FT gene 345..1112 FT /gene="BV1" FT CDS 345..1112 FT /codon_start=1 FT /gene="BV1" FT /product="NSP protein" FT /db_xref="GOA:A5H145" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A5H145" FT /protein_id="ABG26113.1" FT /translation="MYIGKGIRYSNNTMNRAKYNRPVGRRSFVYRRGPKVRVNQSVPKS FT QGDKMTRQRIHENQYGVQYSLLNNTSSVSFITYPRLGGPEPNRSRAYIKLNRLRYKGTV FT NIECSDPDVGMDPNRGGLSGVFTLAIVVDRKPHVGPTGSLPSFDDLFGCNLYSNGSLDI FT SPQMKQRYYIRHVHKRVVSYEKDSIMMNISGNMGLSSPKYVCWSSFKDLDVDSCTGSYS FT NLAKNALLVYYCWVSNMPSKASSFVSFDLDYLG" FT gene complement(1174..2052) FT /gene="BC1" FT CDS complement(1174..2052) FT /codon_start=1 FT /gene="BC1" FT /product="MP protein" FT /db_xref="GOA:A5H146" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A5H146" FT /protein_id="ABG26114.1" FT /translation="MSSQLANAPNSFNYIESNRDEYRLTHDLTEIVLQFPSTAEQWGAT FT VRRRCMKIDHCVIEYRQQVPINASGSVIVEIHDTRMNDNESLQTTYTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVNQGTHFAKFKGKLKMSTAKHSVDVVFRSPTVKILS FT KQFTGKDIDFSHVEYGKVERKLIKSASSSRSALHSAIELRPGESWATRSSVGVDINETE FT SDVAHNRHPYRELHRLSTSMLDPGDSASLVAAARSESNITLSRAQLQELVNSTVDLCIN FT RNCTPQQAKPL" XX SQ Sequence 2649 BP; 738 A; 490 C; 585 G; 836 T; 0 other; accgtgcagc agccgccgct ttttccgtac actttaattt gaattgggct ccagttattg 60 aaagcgacgt ttataaacaa gtggccacga ttgcgccacg tgttgcaata atagccatgg 120 ataaaaatta tatgtgagcc acgcgatatt tatccaaaat tgaaaaaaaa gaccgcgcgt 180 tcatggatga taatattgga ttaactaatt ttagaaatga tttcgtccaa tcattgattg 240 acattggggt ttcattataa ctgaatggca tcatccaact ataaataaca gaaaattgtt 300 taaaagataa attagcctgt gatatttttt ttttgtttgt aaatatgtat attggtaaag 360 gtatacgtta tagcaacaac accatgaatc gtgctaagta caacagacct gttggtcgtc 420 gatcttttgt gtataggcgc ggtcctaaag tacgtgttaa tcagtctgtc ccaaagtcac 480 agggtgacaa gatgaccaga cagcgtatcc atgaaaatca gtatggcgta cagtattccc 540 tattaaacaa tacgtccagt gtgtctttta tcacatatcc tagattaggt gggcctgagc 600 ccaatagaag tcgggcttac ataaaattga ataggcttcg ttacaagggg actgttaata 660 ttgaatgttc agatccagat gttggaatgg atcccaatcg tggtgggctt tctggtgtct 720 tcactctggc tattgttgtt gataggaaac ctcatgttgg acctactggt tcattgccat 780 catttgacga tctgtttggt tgtaatctgt acagcaatgg gagccttgat atctcacccc 840 agatgaagca gcgttactac attcggcacg tacacaaacg tgtcgtatct tatgagaagg 900 attctatcat gatgaacata tcgggcaata tgggattatc ttcccctaaa tatgtatgtt 960 ggtcctcatt caaggacctt gatgtggata gttgtactgg gagctattct aatctagcta 1020 agaatgctct tttagtttat tattgttggg tttcgaacat gccttctaag gcatcatcat 1080 ttgtatcttt tgacctggat tatctgggtt aaattaataa aaatatattt gcaataataa 1140 gaattgtttg aaattggtaa ttgcatttat aattcataat ggtttagcct gttgaggcgt 1200 acaatttcta ttaatgcata aatcgacagt gctattgaca agttcttgta attgtgccct 1260 gctaagtgtg atgttggact cggaccgcgc agctgcaacc agtgatgccg agtcacctgg 1320 gtctagcatg cttgtgctca gcctgtgaag ctctctgtat gggtgtctgt tatgggctac 1380 gtcggactct gtctcgttaa tgtccactcc aactgagctc cttgtggccc aagattcacc 1440 gggccttagt tcgattgccg aatggagggc tgaccttgat gatgaagctg atttgatcag 1500 cttcctctcg accttcccat attccacatg ggagaagtct atatctttcc cggtgaactg 1560 cttagatagt atcttcacgg tgggagagcg aaaaacgaca tcaacggagt gcttggctgt 1620 ggacatcttc agcttgccct tgaacttggc gaaatgtgtt ccctggttga cattagtgtc 1680 tgacaccctg tagtacagct tccatggaat aggatccttg agtgagaaga aggatgcaga 1740 gaagtagtgg agatcaatgt tgcatctaat tgggaaggtg tatgtcgtct gtaatgactc 1800 gttgtcattc atgcgtgtgt catgaatctc gacaattact gagccagaag cgttaattgg 1860 cacctgttgt ctgtactcga tgacacaatg atctatcttc atgcacctcc tccttacagt 1920 tgcaccccat tgttctgcag ttgatgggaa ttgcagcaca atctctgtga gatcatgggt 1980 gagtctgtac tcgtctctat tagactcaat ataattaaaa gaattgggag cgttagctaa 2040 ttgagaactc atgaggagat gttggtcgcg cagcgaaacc agaaaaaatt gttatggatg 2100 ataaactaat gactgaagaa atgagacatt atttgtctga gataatgaag aggatagtct 2160 gttcataaga acatctgggt atggtgtttg cgttttgcga tggaactggt tatatagaca 2220 gatagatgta cggatctaat tggagacaac attctctctc tttctctctc atctctctca 2280 tctctctctt aatttcaatt aaatcttgct taattacgga taatgatgtt gttattatta 2340 agagagatgt tattaagaat gatataatct cggactttct attttaaatg aaacgacaat 2400 cgactctgcg ttttaaatcg gggacaatca aagtctctga tatccgatat atcggggaca 2460 atatataggt ctcccaattt attggtacgg gagtcagcag cgacatagac cctaaacttc 2520 gagggcaagt tgtgtctttt cactattcaa caaaggaaag gacaaataaa agtcaggggt 2580 attttgggta tttcacttta tagtggcaaa atggtaaata acacaccgct gctgcacgac 2640 cctattatt 2649 //