ID   DQ631855; SV 1; linear; genomic RNA; STD; VRL; 798 BP.
XX
AC   DQ631855;
XX
DT   29-MAY-2008 (Rel. 95, Created)
DT   06-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus-PAV isolate Tehama_258_PAV coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-798
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   "Secrets of the herbarium: Historic associations among RNA viruses and wild
RT   grass hosts";
RL   Unpublished.
XX
RN   [2]
RP   1-798
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   ;
RL   Submitted (12-MAY-2006) to the INSDC.
RL   Department of Plant Biology, Michigan State University, 166 Plant Biology
RL   Laboratories, East Lansing, MI 48824, USA
XX
DR   MD5; 5f22683831194c4932ab469d3e8f5c84.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..798
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /host="Elymus multisetus"
FT                   /isolate="Tehama_258_PAV"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:California, Tehama County"
FT                   /isolation_source="wild host population"
FT                   /collection_date="2002"
FT                   /note="acronym: BYDV"
FT                   /db_xref="taxon:2169986"
FT   CDS             196..798
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:B3EYB1"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B3EYB1"
FT                   /protein_id="ABG24226.1"
FT                   /translation="MNSVGRRGPRRANQNGPRRRSRRAIRPVVVVQPNRTGPRRRNGRR
FT                   TGRRGPNSIPGSTGRTEVFIFSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTSGAIFVELDTACKQSALGSYINSFTISKTASKSFRAEAINGKEF
FT                   QESTIDQFWLLYKANGTTTDTAGQFIIKINVSMLTPK"
XX
SQ   Sequence 798 BP; 243 A; 205 C; 174 G; 176 T; 0 other;
     ccagagagtg aaggtgacat ctccacatct gcaatcaatc ctcctctcca ttccggagaa        60
     cgactcgcac aacgaatatt gattaccaaa tcttggcagg atttggaata gggtttatag       120
     taggtatccc ctgtacatta gctctcacgt actttattta caataaagtt tcagacacta       180
     ctagagaggt agtgaatgaa ttcagtaggc cgtagaggac ctagacgagc aaaccaaaat       240
     ggcccaagaa ggcggagccg tagagcaatt cggccagtgg ttgtggtcca acccaatcga       300
     acaggaccca gacgacgaaa tggtcgacgc acaggaagaa gagggccaaa ttctatacct       360
     ggatcaacag gcaggactga ggtattcata ttctcagtcg acaaccttaa agccaactct       420
     tccgggacaa tcaaattcgg tcccagtcta tcgcaatgcc cagcgctttc agacggaata       480
     cttaagtcct accaccgtta caagatcaca agtatccgtg ttgagtttaa gtcacacgcg       540
     tccgccacta cgtcgggcgc tatctttgtt gaactcgaca ccgcgtgcaa gcaatcagcc       600
     ctgggtagct acattaattc cttcaccatc agcaaaactg cctccaagtc cttcagagcc       660
     gaggcgatta atgggaagga attccaagaa tcaacgatag accaattctg gctactctac       720
     aaggcaaacg ggaccactac tgacaccgct ggacagttca tcataaagat aaacgtcagt       780
     atgttgactc ccaaatag                                                     798
//