ID   DQ631853; SV 1; linear; genomic RNA; STD; VRL; 796 BP.
XX
AC   DQ631853;
XX
DT   29-MAY-2008 (Rel. 95, Created)
DT   06-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus-PAV isolate Yolo_280_PAV coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-796
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   "Secrets of the herbarium: Historic associations among RNA viruses and wild
RT   grass hosts";
RL   Unpublished.
XX
RN   [2]
RP   1-796
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   ;
RL   Submitted (12-MAY-2006) to the INSDC.
RL   Department of Plant Biology, Michigan State University, 166 Plant Biology
RL   Laboratories, East Lansing, MI 48824, USA
XX
DR   MD5; 4e63b37ea2f6fa45a9e49f662048b9c3.
DR   GrainGenes; DQ631853; DQ631853.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..796
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /host="Avena fatua"
FT                   /isolate="Yolo_280_PAV"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:California, Yolo County"
FT                   /isolation_source="wild host with natural infection in
FT                   field experiment"
FT                   /collection_date="2002"
FT                   /note="acronym: BYDV"
FT                   /db_xref="taxon:2169986"
FT   CDS             194..796
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q2V8U5"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q2V8U5"
FT                   /protein_id="ABG24224.1"
FT                   /translation="MNSVGRRGPRRANQNGPRRRRRRTVRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALGSYINSFTISKTASKVFRSEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
XX
SQ   Sequence 796 BP; 238 A; 199 C; 186 G; 173 T; 0 other;
     agagtgtgaa ggtgacgact ccacatctgc aatcaatatt gctttccata ccggaaaacc        60
     actcacaaaa cgaatattaa ttaccaaatc ttagctgggt ttgggatagg gttcatagtt       120
     agtataccct gtacattagc tctcgcgtac tttatttaca ataaagtttc agacaccact       180
     agagaggtgg tgaatgaatt cagtaggccg tagaggacct agacgcgcaa atcaaaatgg       240
     cccaagaagg aggcgccgta gaacagttcg gccagtggtt gtggtccaac ccaatcgagc       300
     aggacccaga cgacgaaatg gtcgacgcaa gggaagagga ggggcaaatc ctgtatttag       360
     accaacaggc gggactgagg tattcgtatt ctcagttgac aaccttaaag ccaactcctc       420
     cggggcaatc aaattcggcc ccagtctatc gcaatgccca gcgctttcag acggaatact       480
     caagtcctac catcgttaca agatcacaag tatccgagtt gagtttaagt cacacgcgtc       540
     cgccactacg gccggcgcta tctttattga actcgacacc gcgtgcaagc aatcagcctt       600
     gggtagctac attaattcct tcaccatcag caagaccgcc tccaaggtct tcaggtcaga       660
     ggcaattaac gggaaggaat tccaggaatc gacgatagac caattctgga tgctctacaa       720
     ggccaatgga accaccactg acacggcagg acaattcatc atcacgatga gcgtcagttt       780
     aatgacggcc aaatag                                                       796
//