ID   DQ631851; SV 1; linear; genomic RNA; STD; VRL; 798 BP.
XX
AC   DQ631851;
XX
DT   29-MAY-2008 (Rel. 95, Created)
DT   06-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus-PAV isolate Yolo_276_PAV coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-798
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   "Secrets of the herbarium: Historic associations among RNA viruses and wild
RT   grass hosts";
RL   Unpublished.
XX
RN   [2]
RP   1-798
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   ;
RL   Submitted (12-MAY-2006) to the INSDC.
RL   Department of Plant Biology, Michigan State University, 166 Plant Biology
RL   Laboratories, East Lansing, MI 48824, USA
XX
DR   MD5; be722006cac272323af52c4d40e2a113.
DR   GrainGenes; DQ631851; DQ631851.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..798
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /host="Avena fatua"
FT                   /isolate="Yolo_276_PAV"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:California, Yolo County"
FT                   /isolation_source="wild host with natural infection in
FT                   field experiment"
FT                   /collection_date="2002"
FT                   /note="acronym: BYDV"
FT                   /db_xref="taxon:2169986"
FT   CDS             196..798
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q2V8U5"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q2V8U5"
FT                   /protein_id="ABG24222.1"
FT                   /translation="MNSVGRRGPRRANQNGPRRRRRRTVRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALGSYINSFTISKTASKVFRSEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
XX
SQ   Sequence 798 BP; 239 A; 201 C; 185 G; 173 T; 0 other;
     ccagagtgtg aaggtgacga ctccacatct gcaatcaata ctgctttcca taccggaaaa        60
     ccactcacaa aacgaatatt aattaccaaa tcttagctgg gtttgggata gggttcatag       120
     ttagtatacc ctgtacatta gctctcgcgt actttattta taataaagtt tcagacacca       180
     ctagagaggt ggtgaatgaa ttcagtaggc cgtagaggac ctagacgcgc aaatcaaaat       240
     ggcccaagaa ggaggcgccg tagaacagtt cggccagtgg ttgtggtcca acccaatcga       300
     gcaggaccca gacgacgaaa tggtcgacgc aagggaagag gaggggcaaa tcctgtattt       360
     agaccaacag gcgggactga ggtattcgta ttctcagttg acaaccttaa agccaactcc       420
     tccggggcaa tcaaattcgg ccccagtcta tcgcaatgcc cagcgctttc agacggaata       480
     ctcaagtcct accatcgtta caagatcaca agtatccgag ttgagtttaa gtcacacgcg       540
     tccgccacta cggccggcgc tatctttatt gaactcgaca ccgcgtgcaa gcaatcagcc       600
     ctgggtagct acattaattc cttcaccatc agcaagaccg cctccaaggt cttcaggtca       660
     gaggcaatta acgggaagga attccaggaa tcaacgatag accaattctg gatgctctac       720
     aaggccaatg gaaccaccac tgatacggca ggacaattca tcatcacgat gagtgtcagt       780
     ctaatgacgg ccaaatag                                                     798
//