ID   DQ631849; SV 1; linear; genomic RNA; STD; VRL; 798 BP.
XX
AC   DQ631849;
XX
DT   29-MAY-2008 (Rel. 95, Created)
DT   06-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus-PAV isolate Yolo_272_PAV coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus PAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-798
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   "Secrets of the herbarium: Historic associations among RNA viruses and wild
RT   grass hosts";
RL   Unpublished.
XX
RN   [2]
RP   1-798
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   ;
RL   Submitted (12-MAY-2006) to the INSDC.
RL   Department of Plant Biology, Michigan State University, 166 Plant Biology
RL   Laboratories, East Lansing, MI 48824, USA
XX
DR   MD5; 10c416140377ebb854961c23dc405f5a.
DR   GrainGenes; DQ631849; DQ631849.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..798
FT                   /organism="Barley yellow dwarf virus PAV"
FT                   /host="Avena fatua"
FT                   /isolate="Yolo_272_PAV"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:California, natural grassland in Yolo County"
FT                   /isolation_source="wild host"
FT                   /collection_date="2002"
FT                   /note="acronym: BYDV"
FT                   /db_xref="taxon:2169986"
FT   CDS             196..798
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:B3EYA5"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B3EYA5"
FT                   /protein_id="ABG24220.1"
FT                   /translation="MNSVGRRGPRRANQNGTRRRRRRTVRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALASYINSFTISKTASKVFRAEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
XX
SQ   Sequence 798 BP; 243 A; 199 C; 183 G; 173 T; 0 other;
     ccagagcgtg aaggtgacga ctccacatct gcaatcaata ctactttcca taccggaaaa        60
     ccactcacaa aacgaatact aattaccaaa ttttagctgg gtttggaata gggttcatag       120
     ttagtatacc ctgtacatta gctctcgcgt actttattta caataaagtt tcagacacca       180
     ctagagaggt ggtgaatgaa ttcagtaggc cgtagaggac ctagacgcgc aaatcaaaat       240
     ggcacaagaa ggaggcgccg tagaacagtt cggccagtgg ttgtggtcca acccaatcga       300
     gcaggaccca gacgacgaaa cggtcgacgc aagggaagag gaggggcaaa tcctgtattt       360
     agaccaacag gcgggactga ggtattcgta ttctcagtcg acaaccttaa agccaactct       420
     tccggggcaa tcaaattcgg ccccagtcta tcgcaatgcc cagcgctttc agacggaata       480
     cttaagtcct accaccgtta caagatcaca agtatccgtg ttgagtttaa gtcacacgcg       540
     tccgcaacta cggccggcgc tatctttatt gaactcgaca ccgcgtgcaa acaatcagcc       600
     ctggctagct acattaattc cttcacaatc agcaagaccg cctcaaaggt cttcagagcc       660
     gaagcgatta acgggaagga attccaggaa tcaacgatag accagttttg gatgctctac       720
     aaggctaatg gaaccaccac tgacacggca ggacaattca ttatcacgat gagtgtcagt       780
     ttgatgacgg ccaaatag                                                     798
//