ID   DQ631842; SV 1; linear; genomic RNA; STD; VRL; 796 BP.
XX
AC   DQ631842;
XX
DT   29-MAY-2008 (Rel. 95, Created)
DT   06-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus-MAV isolate Alameda_266_MAV coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus MAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-796
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   "Secrets of the herbarium: Historic associations among RNA viruses and wild
RT   grass hosts";
RL   Unpublished.
XX
RN   [2]
RP   1-796
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   ;
RL   Submitted (12-MAY-2006) to the INSDC.
RL   Department of Plant Biology, Michigan State University, 166 Plant Biology
RL   Laboratories, East Lansing, MI 48824, USA
XX
DR   MD5; f59fc98b7c46ac0cd12eb8e913ada78a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..796
FT                   /organism="Barley yellow dwarf virus MAV"
FT                   /host="Festuca californica"
FT                   /isolate="Alameda_266_MAV"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:California, natural oak woodland in Oakland,
FT                   Alameda County"
FT                   /collection_date="2003"
FT                   /note="acronym: BYDV"
FT                   /db_xref="taxon:2169984"
FT   CDS             197..796
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:B3EY98"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:B3EY98"
FT                   /protein_id="ABG24213.1"
FT                   /translation="MNSVGRRNNRRRNGPRRARRVSAVRRMVVVQPNRAGPKRRTRRRT
FT                   RGGGANLISGPAGRTEVFVFSVNDLKANSSGTVKFGPDLSQCPALSGGILKSYHRYKIT
FT                   NVKVEFKSHASASTVGAMFVELDTSCTQSTLGSYINSFTISKSATKTFTAQQIDGKEFR
FT                   ESTVNQFYMLYKANGSTSDTAGQFIITIRVANMTPK"
XX
SQ   Sequence 796 BP; 244 A; 199 C; 172 G; 181 T; 0 other;
     tccagagtgt gaaggtgact actccacatc tgcaatcaat actactttcc ataccggaaa        60
     accactcaca aaacgaatat taattaccaa atcttagctg ggtttggaat agggtttata       120
     gtgtctatac cctgtacatt agctctcacg tactttattt acaataaagt ttcagacact       180
     actagagagg tagtgaatga attcagtagg ccgtagaaat aaccgcagga gaaatggccc       240
     aagaagagca aggcgcgtta gcgcagttcg gagaatggtt gtggtccaac ccaatcgagc       300
     cggacccaaa cgacgaactc gtcgacgcac aagaggagga ggggcaaatc ttatatctgg       360
     accagcaggc aggactgagg tattcgtatt ctcagtcaac gaccttaagg ccaactcctc       420
     agggacagtc aagttcggtc ccgacctttc gcaatgccca gcgctttcag gtggaatact       480
     caagtcctac caccgttaca agatcacaaa cgtcaaggtt gagtttaagt cacacgcgtc       540
     tgcctctaca gtcggcgcaa tgtttgttga actcgacact tcgtgcacac aatcaacctt       600
     gggtagctac attaactcat tcaccatctc aaaatcagca accaaaacct tcaccgccca       660
     acagattgac gggaaggaat tcagggagag tacggtgaac caattttaca tgctatacaa       720
     ggcgaatggt agtacatccg ataccgccgg gcaattcatc attacaatac gcgttgccaa       780
     catgactccc aaatag                                                       796
//