ID   DQ631841; SV 1; linear; genomic RNA; STD; VRL; 794 BP.
XX
AC   DQ631841;
XX
DT   29-MAY-2008 (Rel. 95, Created)
DT   06-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus-MAV isolate Alameda_264_MAV coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Barley yellow dwarf virus MAV
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-794
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   "Secrets of the herbarium: Historic associations among RNA viruses and wild
RT   grass hosts";
RL   Unpublished.
XX
RN   [2]
RP   1-794
RA   Newton L.A., Linton E.W., Malmstrom C.M.;
RT   ;
RL   Submitted (12-MAY-2006) to the INSDC.
RL   Department of Plant Biology, Michigan State University, 166 Plant Biology
RL   Laboratories, East Lansing, MI 48824, USA
XX
DR   MD5; f5b10634efd3fc5711e604d8fc6883ad.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..794
FT                   /organism="Barley yellow dwarf virus MAV"
FT                   /host="Danthonia californica"
FT                   /isolate="Alameda_264_MAV"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:California, natural grassland in Tilden Park,
FT                   Alameda County"
FT                   /collection_date="2002"
FT                   /note="acronym: BYDV"
FT                   /db_xref="taxon:2169984"
FT   CDS             195..794
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:B3EY96"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:B3EY96"
FT                   /protein_id="ABG24212.1"
FT                   /translation="MNSVGRRNNRRRNGPRRARRVSAVRRMVVVQPNRAGPKRRTRRRT
FT                   RGGGANLISGPAGRTEVFVFSVNDLKANSSGTIKFGPDLSQCPALSGGILKSYHRYKIT
FT                   NVKVEFKSHASASTVGAMFVELDTSCTQSTLGSYINSFTISKSATKTFTAQQIDGKEFR
FT                   ESTVNQFYMLYKANGSTSDTAGQFIITIRVANMTPK"
XX
SQ   Sequence 794 BP; 244 A; 198 C; 172 G; 180 T; 0 other;
     cagagtgtga aggtgactac tccacatctg caatcaatac tactttccat accggaaaac        60
     cactcacaaa acgaatatta attaccaaat cttagctggg tttggaatag ggtttatagt       120
     gtctataccc tgtacattag ctctcacgta ctttgtttac aataaagttt cagacactac       180
     tagagaggta gtgaatgaat tcagtaggcc gtagaaataa ccgcaggaga aatggcccaa       240
     ggagagcaag gcgcgttagc gcagttcgga gaatggttgt ggtccaaccc aatcgagccg       300
     gacccaaacg acgaactcgt cgacgcacaa gaggaggagg ggcaaatctt atatctggac       360
     cagcaggcag gactgaggta ttcgtattct cagtcaacga ccttaaggcc aactcctcag       420
     ggacaatcaa attcggtccc gacctttcgc aatgcccagc gctttcaggt ggaatactca       480
     agtcctacca ccgttacaag atcacaaacg tcaaggttga gtttaagtca cacgcgtccg       540
     cctctacagt cggcgcaatg tttgttgaac tcgacacttc gtgcacacaa tcaaccttgg       600
     gtagctacat taactcattc accatctcaa aatcagcaac caaaaccttc accgcccaac       660
     agattgacgg gaaggaattc agggagagta cggtgaacca attttacatg ctatacaagg       720
     cgaatggtag tacatctgat accgccgggc aattcatcat tacaatacgc gttgccaaca       780
     tgactcccaa atag                                                         794
//