ID DQ629103; SV 1; linear; genomic DNA; STD; VRL; 2765 BP. XX AC DQ629103; XX DT 31-MAY-2006 (Rel. 88, Created) DT 01-JAN-2010 (Rel. 103, Last updated, Version 3) XX DE Papaya leaf curl virus [India:New Delhi:tomato:2005] segment DNA A, DE complete sequence. XX KW . XX OS Papaya leaf curl virus [India:New Delhi:tomato:2005] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2765 RA Pandey P., Mukherjee S.K.; RT "Nucleotide sequence of Tomato leaf curl virus DNA A isolate ToLCND-PRM"; RL Unpublished. XX RN [2] RP 1-2765 RA Pandey P., Mukherjee S.K.; RT ; RL Submitted (14-MAY-2006) to the INSDC. RL Plant Molecular Biology, ICGEB, Aruna Asaf Ali Marg, New Delhi, Delhi RL 110067, India XX DR MD5; f3ab688d7665cb5d6284f7c18aad61b9. DR EuropePMC; PMC2901266; 20546567. XX FH Key Location/Qualifiers FH FT source 1..2765 FT /organism="Papaya leaf curl virus [India:New FT Delhi:tomato:2005]" FT /segment="DNA A" FT /host="tomato cultivar Pusa Ruby" FT /isolate="ToLCND-PRM" FT /mol_type="genomic DNA" FT /country="India" FT /note="mild phenotype" FT /db_xref="taxon:407836" FT gene 147..503 FT /gene="AV2" FT CDS 147..503 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:Q198C9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q198C9" FT /protein_id="ABF71086.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLLENTYSPDTLGYDLIRDL FT ISVIRAKNYVQATSRYNHFHARLEGTPPSQLRQPLCQPCCCPHCPRHKGQSMGEQAHEQ FT EAQDVQDVQKPRCS" FT gene 307..1077 FT /gene="AV1" FT CDS 307..1077 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q198C8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q198C8" FT /protein_id="ABF71087.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPTVRVTKARAWV FT NRPMNRKPRMYRMYRSPDVPRGCEGPCNVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLREIWMDENIKTKDHTNSVMFSLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYAILKIRIYFYDSVSN" FT gene complement(1074..1478) FT /gene="AC3" FT CDS complement(1074..1478) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:Q198C7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q198C7" FT /protein_id="ABF71088.1" FT /translation="MDSRTGEPITAAQAENSVFIWEITNPLYFKITEHHNRPFLRNHDI FT ITVQIRFNHNLRKALGIHKCFLTFRIWTTLQPQTGHFLRVFRTQVLQYLNNFAVISINN FT VLSAVNHVLWNVLAQTIHVQSSNIIKFNLY" FT gene complement(1219..1623) FT /gene="AC2" FT CDS complement(1219..1623) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:Q198C6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q198C6" FT /protein_id="ABF71089.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLDCGCSYFIALR FT CHGYGFTHRGTHHCSSSREFRVYLGDNKSPIFQDNRAPQPAIPEEPRHHHRADTVQSQP FT EESVGDTQMFSNLPNLDDLTASDWSFLKGI" FT gene complement(1526..2611) FT /gene="AC1" FT CDS complement(1526..2611) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:Q198C5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q198C5" FT /protein_id="ABF71090.1" FT /translation="MAPPKRFQIYAKNYFLTYPQCSLTKEEALSQLQNLSTPTNKLFIR FT VCRELHENGEPHIHVLIQFEGKFKCQNNRFFDLVSPSGPAHFHPNIQGAKSSSDVKAYV FT EKNGDFIDFGVFQVDGRSARGGQQSANDAYAGAINSGSKAAALNILREKAPKDFVLQYH FT NLSANLDRIFTPPLEVYVSPFCSSSFDQVPEELEEWAAENVLGAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKDFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYNEFLDEEKNSALKNWALKNATFITLEGPL FT YSGSNQSAAQAGQEGDQASSG" FT gene complement(2161..2460) FT /gene="AC4" FT CDS complement(2161..2460) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q198C4" FT /protein_id="ABF71091.1" FT /translation="MKMGNLISTSSYNSKVNSNAKTTDSSTSFPHQGQHISIRTFRELK FT ARQMSRPMWKKTETSLILEFSKSMEDQLEEVSSLPTTHMPGQSIQGPKLRPSIY" XX SQ Sequence 2765 BP; 737 A; 569 C; 644 G; 815 T; 0 other; accggatggc cgcgattttt tttaccgtgg gccccactac gcacgtgctg acaaagacat 60 gtgcaccaat taaaatcgtc cctcatagct taattatttc atggtccccc ctataaactt 120 gggctccaag tagtgcactc ttaccaatgt gggatccatt agtaaacgag tttcctgaaa 180 ccgttcacgg ttttaggtgt atgttagcag ttaaatatct gcagctacta gaaaatacgt 240 attctccaga cactctgggg tacgatttaa tcagggattt gatctccgtt attagggcta 300 agaattatgt ccaagcgacc agcagatata atcatttcca cgcccgcctc gaaggtacgc 360 cgccgtctca acttcgacag cccttatgcc agccgtgctg ctgcccccac tgtccgcgtc 420 acaaaggcca gagcatgggt gaacaggccc atgaacagga agcccaggat gtacaggatg 480 tacagaagcc cagatgttcc tagggggtgt gaaggcccat gtaacgtcca gtcttttgag 540 tctagacacg atgtagttca tatagggaag gttatgtgta ttagtgatgt tacccgtggt 600 actgggttaa cccatagagt aggtaagcgt ttctgtgtta agtctgtgta cgtattacgt 660 gagatatgga tggatgagaa tatcaagact aaagatcaca cgaatagtgt gatgttttcc 720 cttgtccgtg atcgtcgtcc tgttgataaa ccacaagatt ttggagaggt gttcaacatg 780 tttgacaacg agcctagcac tgccactgtg aagaatatgc atagagatcg ttatcaggtt 840 ttgagaaaat ggcacgcaac ggttactggt ggacagtacg cgtcgaagga acaggcatta 900 gttaagaagt tcgttagggt taataattat gttgtgtata accagcaaga agctggtaaa 960 tatgagaatc atactgagaa tgcattgatg ttgtacatgg cgtgtactca cgcctctaat 1020 cccgtgtatg ctattttaaa gatacggatc tatttctatg attcagtatc gaattaataa 1080 agattgaatt ttattatatt tgaactttgt acatgaattg tttgtgctaa tacattccat 1140 aatacatggt tgacagcact aagtacattg tttatactaa ttacagcaaa attatttaaa 1200 tactgcaaca cttgggtcct aaataccctt aagaaatgac cagtctgagg ctgtaaggtc 1260 gtccagattc ggaaggttag aaaacatttg tgtatcccca acgctttcct caggttgtga 1320 ttgaaccgta tctgcacggt gatgatgtcg tggttcctca ggaatggccg gttgtggtgc 1380 tctgttatct tgaaatatag gggatttgtt atctcccaga taaacacgga attctctgct 1440 tgagctgcag tgatgggttc ccctgtgcgt gaatccatag ccgtggcagc gtaatgcgat 1500 gaaatatgaa caaccgcagt ctaggtcaac ccgacgacgc ctggtcccct tcttggccag 1560 cctgtgctgc actttgattg gaacctgagt agagtgggcc ttcgagggtg atgaaggtcg 1620 cattctttaa agcccaattt ttgagtgcgc tatttttctc ttcatccaag aactcgttat 1680 agctggaatt gggtcctgga ttgcagagga agatagcggg aattccacct ttaatttgaa 1740 ctggctttcc gtatttagtg ttggattgcc agtccttctg ggcccccatg aattctttaa 1800 agtcctttag gtagtggggg tcgacgtcat caatgacgtt ataccaggcg tcattactgt 1860 agacctttgg gctaaggtcg agatgtccac acaaatagtt gtgtggacct agtgacctgg 1920 cccacattgt cttgcctgtt ctactatcgc cctctatcac tatactgatg ggtctcaatg 1980 gccgcgcagc ggcaccgaga acattctcgg cagcccattc ttcaagttcc tccggaactt 2040 gatcgaaaga agaagaacaa aaaggagaaa cataaacctc caacggaggc gtaaaaatcc 2100 tatctaaatt tgcacttaaa ttatgatatt gtaatacaaa atctttggga gctttctccc 2160 ttaatatatt gagggccgca gctttggacc ctgaattgat tgccccggca tatgcgtcgt 2220 tggcagactg ctgacctcct ctagctgatc ttccatcgac ttggaaaact ccaaaatcaa 2280 tgaagtctcc gtttttttcc acataggcct tgacatctga cgagctttta gctccctgaa 2340 tgttcggatg gaaatgtgct ggccctgatg gggaaacgag gtcgaagaat ctgttgtttt 2400 ggcatttgaa tttaccttcg aattgtatga ggacgtggat atgaggttcc ccattttcat 2460 gtaattcgcg acaaaccctg atgaacaatt tattagtggg ggtgcttagg ttttgaagtt 2520 gggaaagtgc ttcttcttta gtgagggaac actgtggata tgttaagaaa taatttttag 2580 catatatttg aaaacgtttt ggaggagcca tgttgacttg gtcaatcggt actcaacaaa 2640 cttggctatg caatcggtga atggtactca ctatatagtg tgagtaccaa atggcatgtt 2700 cgtaattttg taagcaaatt caaaatttaa ttcttaccaa aaagcgggcc atccgcacta 2760 atatt 2765 //