ID DQ629102; SV 1; linear; genomic DNA; STD; VRL; 2751 BP. XX AC DQ629102; XX DT 31-MAY-2006 (Rel. 88, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 2) XX DE Papaya leaf curl virus segment DNA A, complete sequence. XX KW . XX OS Papaya leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2751 RA Pandey P., Mukherjee S.K.; RT "Nucleotide sequence of Tomato leaf curl virus DNA A isolate ToLCND-CTM"; RL Unpublished. XX RN [2] RP 1-2751 RA Pandey P., Mukherjee S.K.; RT ; RL Submitted (11-MAY-2006) to the INSDC. RL Plant Molecular Biology, ICGEB, Aruna Asaf Ali Marg, New Delhi, Delhi RL 110067, India XX DR MD5; c64b6807df0a567c605dfae94553151e. DR EuropePMC; PMC2901266; 20546567. DR EuropePMC; PMC3002923; 21092241. DR EuropePMC; PMC5796946; 29430354. XX FH Key Location/Qualifiers FH FT source 1..2751 FT /organism="Papaya leaf curl virus" FT /segment="DNA A" FT /host="cherry tomato" FT /isolate="ToLCND-CTM" FT /mol_type="genomic DNA" FT /country="India" FT /note="mild phenotype" FT /db_xref="taxon:53260" FT gene 145..501 FT /gene="AV2" FT CDS 145..501 FT /codon_start=1 FT /gene="AV2" FT /product="AV2" FT /note="pre-coat protein" FT /db_xref="GOA:Q198D5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q198D5" FT /protein_id="ABF71080.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQVHEQ FT KAQDVQDVQKSRCP" FT gene 305..1075 FT /gene="AV1" FT CDS 305..1075 FT /codon_start=1 FT /gene="AV1" FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:Q198D4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q198D4" FT /protein_id="ABF71081.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRSMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSFYFVGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYVACTHASNPVYATLKIRIYFYDSVSN" FT gene complement(1072..1476) FT /gene="AC3" FT CDS complement(1072..1476) FT /codon_start=1 FT /gene="AC3" FT /product="AC3" FT /db_xref="GOA:Q198D3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q198D3" FT /protein_id="ABF71082.1" FT /translation="MDSRTGEPITAAQAGNGVFIWEIQNPVYFKITEHHNRPFLMKEDI FT ITVQIQFNHNLRKVLGIHKCFLAYRIWMTSQPPTGRFLRVFKTQVLKYLNNLGVISINN FT VIRAVDHVLWNILHHVVYVDQTYSIKFIIY" FT gene complement(1217..1621) FT /gene="AC2" FT CDS complement(1217..1621) FT /codon_start=1 FT /gene="AC2" FT /product="AC2" FT /db_xref="GOA:Q198D2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q198D2" FT /protein_id="ABF71083.1" FT /translation="MRPSSPSKAHFTQVPIKVQHKIAKKGIRRRRVDLPCGCSYFISIA FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSRVFQDNRTPQQAIPNEGRHHHRSDTVQSQP FT EESVGDTQMFPSLPNLDDLTASDWSFLKGI" FT gene complement(1524..2609) FT /gene="AC1" FT CDS complement(1524..2609) FT /codon_start=1 FT /gene="AC1" FT /product="AC1" FT /db_xref="GOA:Q198D1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q198D1" FT /protein_id="ABF71084.1" FT /translation="MPRTHQFQVKAKNIFLTYPKCPIPKEQMLELLKNISCPSDKLFIR FT VSQEKHQDGSLHIHALIQFKGKSQVQKPQTFRCHSPKYLHPIPPKLPGSKVQLRCQVYV FT EKDGDYIDWGQFQIDGRSARGGQQTTNDAAAEALNAGSAEAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAADNVVSAAARPIRPISIVIEGD FT SRTGKTMRARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNAALKNWALKNATFITLEGPL FT YSGSNQSAAQDSQEGDQASTS" FT gene complement(2195..2452) FT /gene="AC4" FT CDS complement(2195..2452) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="GOA:Q198D0" FT /db_xref="InterPro:IPR022690" FT /db_xref="UniProtKB/TrEMBL:Q198D0" FT /protein_id="ABF71085.1" FT /translation="MGLCISMPSSNSKVNPRFRNPRHFDVTHPNTSTPFHPNFQGAKSS FT SDVKSTSRRTVITSTGVSFRSMDDLLEEVNRQLMMLQQRR" XX SQ Sequence 2751 BP; 728 A; 548 C; 636 G; 839 T; 0 other; accggatggc cgcgattttt ttttgtgggc ccctcaacgc actaactgac aaagacatga 60 ggaccaatca catgatgcgc tcaaagctta attgttatgt ggtcccctat ttaaacttcg 120 ttaccaagta ttgtacatcg cactatgtgg gatccattgt taaacgagtt tcccgaaacc 180 gttcacggtt ttagatgtat gttagcagtt aaatatttgc agttagtaga aaagacctat 240 tctcctgata cattaggtta cgatttaatt agggatttaa ttttagttat tagggctaga 300 aattatgtcg aagcgaccag cagatataat catttccacg cccgcttcga aggtacgccg 360 ccgtctcaac ttcgacagcc catatgtgag ccgtgctgct gcccccattg tccgcgtcac 420 caaagcaaaa gcatgggcga acaggtccat gaacagaaag cccaggatgt acaggatgta 480 cagaagtcca gatgtcccta gaggttgtga aggcccatgt aaggtccagt cgtttgagtc 540 cagacatgat gtagtccata tagggaaggt catgtgtatt agtgatgtca ctcgtggaac 600 tgggttgacc catcgagtgg gtaagcgttt ttgcgttaag tctttttatt ttgtggggaa 660 gatctggatg gatgagaaca tcaagaccaa gaatcacacg aacagtgtca tgttttttct 720 tgttcgtgac cgtcgtcctg ttgacaagcc acaagacttt ggagaggtgt tcaatatgtt 780 tgacaacgag cctagcactg ctactgttaa gaatatgcac agagatcgtt atcaggtgtt 840 gaggaagtgg catgcaactg tcaccggtgg acagtacgct tcaaaggaac aagctctcgt 900 gaagaagttt attagagtta ataattatgt tgtttataac cagcaagaag ctggcaagta 960 tgagaatcat tctgagaatg cgttaatgtt gtatgtggcg tgtactcacg cctctaaccc 1020 tgtgtatgct actttgaaga tacggatcta tttttatgat tcagtatcga attaataaat 1080 aatgaatttt attgaatatg tttggtctac atatacaacg tggtgtaata tattccataa 1140 tacatgatca acggctctaa ttacattgtt aatactgata actcctaagt tatttaaata 1200 cttaagcact tgggtcttaa atacccttaa gaaacgacca gtcggaggct gtgaggtcat 1260 ccagattcgg taggctagga aacatttgtg tatccccaac actttcctca ggttgtgatt 1320 gaactgtatc tgaacggtga tgatgtcttc cttcattagg aatggcctgt tgtggtgttc 1380 tgttatcttg aaatacacgg gattttgaat ctcccagata aacacgccat tccctgcttg 1440 agctgcagtg atgggttccc ctgtgcgtga atccatggtc gtggcaggct atggatatga 1500 agtatgaaca cccacacggt agatcaactc gtcgacgcct gatccccttc ttggctatct 1560 tgtgctgcac tttgattgga acctgagtaa agtgggcctt cgagggtgat gaaggtcgca 1620 ttctttaaag cccaattctt gagtgcagca tttttctctt catccaagaa ttctttatag 1680 cttgagttgg gtcctggatt gcagaggaag atagttggaa ttccaccttt aatttgaact 1740 ggctttccgt actttgtatt tgattgccag tccctttggg cccccatgaa ctccttaaag 1800 tgctttaggt agtgggggtc tacgtcatca atgacgttat accaggcatc attattgtag 1860 acctttgggc taaggtctag atgaccacac aaatagttat gtggacccag tgatctggcc 1920 cgcatcgtct tcccagttct actgtcaccc tcaatcacta tacttatggg ccttataggc 1980 cgcgcagcgg cactaacgac gttgtcggca gcccactcct caagttcttc tggaacttga 2040 tcaaatgaag aagaagaaaa aggagaaaca taaacctcca ttggaggtgt aaaaatccta 2100 tctaaattac attttaaatt atggtattga aaaataaaat ctttagggag tttttcccta 2160 attattgcta aagctgcttc cgctgaacct gcatttagcg cctctgctgc agcatcatta 2220 gttgtctgtt gacctcctcg agcagatcgt ccatcgatct gaaactgacc ccagtcgatg 2280 taatcaccgt ccttctcgac gtagacttga catctgagct ggactttgct ccctggaagt 2340 ttgggtggaa tggggtggag gtatttgggt gagtgacatc gaaatgtctg gggtttctga 2400 acctgggatt tacctttgaa ttggatgagg gcatggatat gcagagaccc atcttggtgt 2460 ttttcctgtg acactctgat aaataattta tcagacgggc aagaaatatt tttaaggagt 2520 tcgagcattt gctctttggg tattgggcat tttggataag taaggaagat gttttttgct 2580 ttaacttgga actgatgtgt ccgaggcata atgaattggg tgctctctaa aatctgagga 2640 atggggatct ttgggtgcct atttatattg agctcccaaa tggcattatt gtaatttggg 2700 gaaataattc aaaatcctca cgctccaaaa agcggccatc cgtataatat t 2751 //