ID   DQ530434; SV 1; linear; genomic RNA; STD; VRL; 1759 BP.
XX
AC   DQ530434;
XX
DT   06-JUN-2006 (Rel. 88, Created)
DT   06-JUN-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Sorghum mosaic virus isolate Yunnan polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sorghum mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1759
RA   Li W.F., Dong J.H., Ding M., Zhang Z.K.;
RT   "Identification of an isolate of Sorghum mosaic virus infecting sugarcane
RT   in Yunnan";
RL   Unpublished.
XX
RN   [2]
RP   1-1759
RA   Li W.F., Dong J.H., Ding M., Zhang Z.K.;
RT   ;
RL   Submitted (06-MAY-2006) to the INSDC.
RL   Biotechnology and Genetic Resources Institution, Yunnan Academy of
RL   Agricultural Sciences, Xuefu Road, Kunming, Yunnan 650223, China
XX
DR   MD5; 1b85fab3c67aa7a64747dcba955bf5a3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1759
FT                   /organism="Sorghum mosaic virus"
FT                   /host="sugarcane"
FT                   /isolate="Yunnan"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:32619"
FT   CDS             <1..1506
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="encodes NIb and coat proteins"
FT                   /db_xref="GOA:Q19AW5"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q19AW5"
FT                   /protein_id="ABF74756.1"
FT                   /translation="GNNSGQPSTVVDNTLMVIIAFNYTMLSCGIEVDMIDEICKMYANG
FT                   DDLLLAIRPDYEHLLDDFSKHFSDLGLNFDFTSRTRNREELWFMSTRGIKIDGMYIPKL
FT                   EQERIVAILEWDRSLLPQYRLEAICAAMVEAWGYPQLLHEIRKFYAWILEMQPFATLAK
FT                   EGLAPYIAETALRNLYTGAGIREEELDVYYTQFIKDLPEYVEDELIDVFHQAGGGTVDA
FT                   EKQRQDAAAKKRADDDAKAKADADAKKKADDEAAQRTQNQKDKDVDVGTSGTVTVPKLK
FT                   AMSKKMRLPQAKGKNILHLDFLLGYKPQQQDISNTRATRAEFDRWYAAVQKEYELDDTQ
FT                   MTVVMSGLMVWCIENGCSPNINGVWTMMDGEEQRTFPLKPIIENASPTFRQIMHHFSDA
FT                   AEAYIEYRNSTERYMPRYGLQRNLTDYNLARYAFDFYEITSRTTARAKEAHMQMKAAAV
FT                   RGSNTRMFGLDGNVGESQENTERHTAGDVSRNMHTLLGVQQHH"
XX
SQ   Sequence 1759 BP; 589 A; 337 C; 403 G; 430 T; 0 other;
     ggaaacaata gcggtcaacc atctactgtt gttgacaaca cattaatggt gatcatagct        60
     tttaattaca cgatgctatc ttgcgggatc gaagtagata tgatagacga gatatgcaaa       120
     atgtatgcga atggagatga tctcctacta gccattcgac cagattacga acacctgttg       180
     gatgatttct ccaaacactt ctctgatcta ggattaaact ttgatttcac atcacgaact       240
     agaaatagag aagaactatg gttcatgtca acacgaggca tcaaaatcga tggaatgtac       300
     atcccaaaat tggagcagga aagaatagtt gctatattag agtgggacag atcattacta       360
     cctcaatata gattagaagc gatatgtgct gctatggtgg aagcttgggg gtatccacaa       420
     ttgttacatg agattagaaa attttatgcc tggattctcg aaatgcaacc atttgccaca       480
     ctggcaaaag aaggactcgc tccatacata gcagaaacag ctctacgcaa tctttacaca       540
     ggagcaggaa tcagagaaga ggaattggat gtttattata cacaatttat caaagattta       600
     cctgagtatg tggaagatga gttaattgat gtgtttcatc aagcaggggg tggcacggta       660
     gatgcggaga aacagagaca agatgctgct gcaaagaaga gagctgatga tgatgctaaa       720
     gcaaaagcgg atgctgatgc gaaaaagaaa gcagatgacg aagcagcgca gagaacacaa       780
     aatcagaaag ataaagatgt tgatgttgga acgtcaggca cagtcacagt accaaaactc       840
     aaagctatgt ccaagaagat gcgtttgcca caagcaaaag gaaagaatat tttacatctc       900
     gatttcctac ttggatacaa gccacaacag caagacatct caaacacacg agcaacacga       960
     gcagagtttg ataggtggta tgcagccgta caaaaagaat atgaacttga tgacacacaa      1020
     atgacagttg tcatgagtgg actaatggta tggtgtatag aaaatggttg ctcaccgaat      1080
     atcaatggtg tttggaccat gatggatgga gaagaacaaa gaacatttcc tttaaagcca      1140
     ataattgaaa atgcttctcc aacatttagg cagatcatgc atcactttag tgatgcagct      1200
     gaagcgtata tagaataccg taactcaacg gaacgctaca tgccaagata cggacttcag      1260
     cgaaacttga ccgactacaa cttagcacgt tatgcttttg atttctatga gatcacatcg      1320
     cgtacaacag cccgtgctaa ggaggcccac atgcagatga aagctgcagc agttcgtggt      1380
     tcaaataccc ggatgttcgg cttggatggg aatgtcggcg agtctcagga gaatactgaa      1440
     cgtcacactg ctggcgacgt gagtcgcaac atgcacaccc ttcttggggt gcaacagcac      1500
     cactgacgtg acggaaaccc tgtttgcagt acctaagtat tatatatata tcctatgtga      1560
     gtgaggccat gcctcgttag tataatatat atttactttc aaagtattta ctattctgca      1620
     agggagtgag gacgcatcct ccaacctttt agtacgtact ttactagctt cgaaccacta      1680
     gacggacaat ctgttgtgtg gccgtgctac gatgcaggtg ctgcgagtct tgtggcaaga      1740
     gacaaaaaaa aaaaaaaaa                                                   1759
//