ID   DQ512476; SV 1; linear; genomic RNA; STD; VRL; 2209 BP.
XX
AC   DQ512476;
XX
DT   18-JUL-2006 (Rel. 88, Created)
DT   18-JUL-2006 (Rel. 88, Last updated, Version 1)
XX
DE   Cucumber mosaic virus isolate PNb segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2209
RA   Zhang H., Chen J.;
RT   "The complete nucleotide sequence of the genome RNA of a new Cucumber
RT   mosaic virus";
RL   Unpublished.
XX
RN   [2]
RP   1-2209
RA   Zhang H., Chen J.;
RT   ;
RL   Submitted (23-APR-2006) to the INSDC.
RL   Biological Science, Institute of Molecular Microbiology, Zhejiang
RL   University, Kaixuan Road 268#, Hangzhou, Zhejiang 310029, China
XX
DR   MD5; bf2ec158d2e995571a7349b7874eeaeb.
DR   EuropePMC; PMC3550734; 23637513.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2209
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Pinellia ternata"
FT                   /isolate="PNb"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /note="subgroup: IB"
FT                   /db_xref="taxon:12305"
FT   CDS             127..966
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q0Q6S2"
FT                   /protein_id="ABG67902.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGNIASFFKSGYDAGELRSKGYMSIPQVLCAVTRTDSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVVE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPYNRLAEQSKPSAVARLLK
FT                   SQLNNIESSRYVLPCAKINQNARSESEELNVESPPVAIGSSSASRSETFRPEVVNGL"
FT   CDS             1267..1923
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q0Q6S1"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q0Q6S1"
FT                   /protein_id="ABG67903.1"
FT                   /translation="MDKSESPSAGRNRRRRPRRGSRSASSSTDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLVLPDSVTDFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVSAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALESDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2209 BP; 507 A; 514 C; 539 G; 649 T; 0 other;
     gtaatcttac cactgtgtgt gtgttcacta taggtaatct taccactgtg tgtgtgtgtg        60
     tgtgtcgtgt cgcgtcgagt cgtgctgtcc gcacatttat catttgtgtg ttagaatacc       120
     cgaggcatgg ctttccaagg taccagtagg actttaactc aacagtcctc agcggcgacg       180
     tctgacgagc ttcagaagat attgttcagc cctgatgcca ttaagaaaat ggctactgag       240
     tgtgacctag gtcgacatca ttggatgcgc gctgataacg ccatctctgt ccgacccctc       300
     gttcccgaag taacccatgg taacattgcg tccttcttta agtctggata tgatgccggt       360
     gaattgcgtt ctaaaggata tatgagtatc cctcaggtgt tgtgtgccgt tacacgaacg       420
     gattccactg atgccgaagg atctttgaga atttacctgg ctgatttggg cgacaaggag       480
     ttatctccta tagatggaca atgtgtttca ttacataacc atgatcttcc cgctttagtg       540
     tctttccaac cgacgtatga ttgtcctatg gagacagttg ggaatcgtaa gcggtgcttt       600
     gctgttgtcg ttgagagaca tggttatatt gggtataccg gcaccacagc cagcgtgtgt       660
     agtaattggc aagctcgatt ttcttctaag aataacaatt acactcacat cgcggctggg       720
     aagactctag tactgccata caacagatta gctgagcaat caaaaccgtc agcggtggct       780
     cgcctgttga agtcgcaatt gaacaacata gaatcttctc gctacgtttt accgtgtgcg       840
     aagattaatc aaaatgcgcg cagtgagtcc gaggaattga atgttgaaag ccctcctgtc       900
     gcaatcggga gttcttccgc gtcccgctcc gaaaccttta gaccggaggt ggttaacggt       960
     ctttagtatt ttggtgcgta ttagtatacg tgtatgtgtt tgtctgtaca tattaccgta      1020
     tctatggtgt cctgtacgtg ttgagttgaa acagtagaca accgtgacgc gacgtcgtgt      1080
     tgagaaggga acacatctgg ttttagtagt ccacatcaca gctttgaggt tcaattcctc      1140
     ttgctccctg ttgggcccct tactttttca tggatgcttc tccacgaaat tgcgttctgt      1200
     ctactggagt aaagtgagtg agtgtgtgtg ttatatcact ttctttctcg tagattgagt      1260
     cgagtcatgg acaaatctga atcacccagt gccggtcgta accgtcgacg tcgtccgcgt      1320
     cgtggttccc gctccgcttc ctcctccacg gatgctaact ttcgagtctt gtcgcaacaa      1380
     ctctcgcgac tcaataagac gttagcagct ggtcgtccaa ctattaacca cccaaccttt      1440
     gttggtagtg aacgttgtaa acctggttat acgttcacat ctattacctt aaagccacca      1500
     aaaatagacc gcgggtctta ttatggcaaa aggttggtac tgcctgattc agtcacggat      1560
     tttgataaga aacttgtttc gcgcatccag attcgagtta atcctttgcc gaaatttgat      1620
     tctaccgtgt gggttacggt ccggaaagtt cctgcctcct cggacttatc cgtttctgcc      1680
     atttcagcta tgtttgcaga cggagcctca ccggtactgg tttatcagta tgcagcatcc      1740
     ggggtccaag ctaataataa attattgtac gacctttcag cgatgcgggc tgatatcggc      1800
     gacatgagaa agtacgccgt cctcgtgtat tcaaaagacg atgcgcttga gtcagacgag      1860
     ctagtacttc atgttgacat tgagcaccaa cgcattccca cgtctggtgt gctcccagtt      1920
     tgaatccgtg ttccaggatc caccctcttt tgttgtgcgg gtgctgagtt ggcagtgttg      1980
     ctacaaactg tctgaagtcg ctaagtgcga acgggttgtc catccagctt acggctaaaa      2040
     tggtcagtcg tggagaaatc cacgccggag gtttacaaac ctttgaggcg cctttgaaac      2100
     cgactcctgg gtttcttcgg aaggactttg tccgtgtact tctagcacaa gatgctagtg      2160
     tagggtacag gtgcccccca ctatttagtg gggctctaaa aggagacca                  2209
//