ID DQ494209; SV 1; linear; genomic RNA; STD; VRL; 4505 BP. XX AC DQ494209; XX DT 01-JUN-2007 (Rel. 92, Created) DT 01-NOV-2007 (Rel. 93, Last updated, Version 2) XX DE Rice gall dwarf virus isolate GX segment S1, complete sequence. XX KW . XX OS Rice gall dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-4505 RX DOI; 10.1007/s11262-007-0142-8. RX PUBMED; 17674177. RA Zhang H.M., Yang J., Xin X., Chen J.P., Adams M.J.; RT "Molecular characterization of the largest and smallest genome segments, S1 RT and S12, of Rice gall dwarf virus"; RL Virus Genes 35(3):815-823(2007). XX RN [2] RP 1-4505 RA Zhang H.-M.; RT ; RL Submitted (14-APR-2006) to the INSDC. RL Zhejiang Provincial Key Laboratory of Plant Virology, Key Laboratory of RL Animal and Plant Virology, Ministry of Agriculture, Institute of Virology RL and Biotechnology, Zhejiang Academy of Agricultural Sciences, Shiqiao Road RL 198#, Hangzhou City, Zhejiang Province 310021, China XX DR MD5; bbd6bcd2e15f37d739897ab13b41f0fe. XX FH Key Location/Qualifiers FH FT source 1..4505 FT /organism="Rice gall dwarf virus" FT /segment="S1" FT /isolate="GX" FT /mol_type="genomic RNA" FT /db_xref="taxon:10986" FT CDS 42..4418 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="p1; RdRp" FT /db_xref="GOA:A5X2X4" FT /db_xref="InterPro:IPR007097" FT /db_xref="UniProtKB/TrEMBL:A5X2X4" FT /protein_id="ABF67520.1" FT /translation="MSGADVESYIFPRIREILTGGISGIREAYINELRVCEKLIQWRNG FT SDNQVDSTNDASVKGMVFHRVSERNELQNRYAGLYDDLFKLNNNNVDIDVITKHDETIG FT KIISKELKSKMWYELNDEDIYSSLLPEFRFQTLDDYYDNMKKYLSQDDRDEKENNNKEE FT EDVKHRNDNATRIQWQTLMEKDRKVKLHDDLSFSNEVETSLSTYINLRTKEEMDPRYVY FT HPVPALFITLTLLKVLTGGKSFSYGVRYLEKLCKTISKGERSLATYPAIFGSNGELVAT FT RLYSHYAIKMRLTLNNMTYLLTYKSCHEFKDFYIDVNDEVLLYMLENPNGGRDLKKAVT FT RLNLYYGLRYNPKTTDSLKIIDGVDYHHEHPKYSDRSYDAPIIESENHFSASEQCYEHN FT AKLLNKAVYSKTAKEYIDSDIKKVKDLNLPLLTKFTEKLVDMRCNKSIVYDIVFMRTLL FT NMGGYSRSNQITDFKGTIDDITKMNDEYLSDVSENGKRAKMSEWMYPKMEACGYGLTKS FT ILNGQMVGVSYPSASESKAHIESYITPNSAGIGNLRLDVDVGGKMYKVRTTSKSAFVNA FT LGTNIFNIDTISMEPMFLSEYLTHLNQDEKMLLYDRRKNRQIQDIELMRLCGQNVIGSR FT STTAWRPVRPIYINVIQAHLAQAFIIGPHINATVGRQRTPPKGLWFTGEDVGIGFATIY FT QNGTSDVISHAIEASASGRCLSVLADCSSWDQTFLTESIIPYYQGIKRAISEFGQADSE FT NYYMYDNQRKDVVGMRLTETIDWFNEYQKKRIFNASYLGERYSFKVQYMWSGRLDTFFM FT NSVQNALITERIANQVSSSVAGSPSLVWFQVAGDDAIMVYNANSITSSDQVDAIRKTVV FT DEYTADNHIINPQKTVISHISGEYAKIYYYAGMHFRDPSIQLHESEKISKATNITEVMR FT GYAQVAFEYNKRAIGSLRINSLYARLLASLAYSINVKRSDDQSIENKSSRRGSKAKVRN FT TKTNKLRSFSSVKYYPPLTSVITPTGVKGGLGMSLSGISLNEILMIKELLLDLVEAGLK FT IVDQVSFEQNEIVSKSLMRHFLRDRKDLIKEMGLDKGTKPVMAVRYRSSDSAFSSGNFE FT NGISMRLESLDSHKLSIARQSEAKLKSVGVNLPKMYTYENLPYSTINQSLKGITIDKDL FT SRMTNSDLVDQLRSIPESECKGNLISKYPVYGLFNARRIISMDEKVDNPIRYISTPDEG FT KALERLIGSRTGIQFKNQGYGGSPAIVRFIRRNGLTITEENLIDLVISSGAISLANPKQ FT NMIELFQAISGDQQSSLELANFFMNEKPHWEDKAISITINGSILENCDSRISNISRFVS FT IDAIRIPGDIKKMFTYIAYVYMCQMFILDDNTPSKVHISINEEQLRDFLISAKPISKNR FT MKQTIDMKFSNQNSGVTIEIDEESLSRTADLDYEVLKLVHPLSVPFLRNLSEGSPM" XX SQ Sequence 4505 BP; 1546 A; 765 C; 956 G; 1238 T; 0 other; ggcatttttt gagccaagcc accgaagcat acgtgtctgc catgagtggc gcagatgtcg 60 agtcatacat atttccgcgt atccgggaga ttctgactgg tggaatttct ggaatccgag 120 aagcatacat taatgagttg agagtctgtg aaaaactcat tcaatggaga aatggatcag 180 acaaccaagt tgacagtaca aatgatgcat ctgtgaaagg tatggtattt cacagagtat 240 ctgagaggaa tgaattacag aatagatacg ccggattata cgacgatctt ttcaaattga 300 ataacaataa tgttgatatc gacgtgatca ctaaacatga tgagacgatt ggtaaaataa 360 tctcaaagga gttgaaatct aaaatgtggt acgaattgaa tgatgaagac atttattcat 420 cgttgttgcc tgaattcaga ttccagactt tagatgatta ttatgataat atgaaaaagt 480 atctttctca agatgatcgt gacgagaaag agaataacaa caaagaagaa gaagatgtta 540 aacatagaaa tgataatgcg acgcgaatac aatggcaaac gcttatggag aaagacagaa 600 aagtcaagct ccatgatgat ttatcattct caaatgaagt ggaaactagt ctatctactt 660 acatcaactt acgaactaag gaggagatgg atccaaggta tgtataccat ccagttcccg 720 ctttatttat aactcttaca ttattaaaag tacttacggg agggaaatca ttttcgtatg 780 gcgtacgcta tcttgagaag ctttgtaaaa caatatccaa aggagagcgc agtttagcta 840 cataccctgc gatcttcgga tctaatggcg aattagtagc gactagatta tactctcatt 900 acgccataaa gatgaggctt accctgaaca acatgacgta tttattgact tataaatcat 960 gtcatgagtt taaggatttt tacattgatg taaacgatga agtcctgtta tacatgcttg 1020 aaaatcctaa cggtggaagg gatttgaaga aagcagtgac tagacttaat ctatactacg 1080 ggttacgata taatccaaaa actactgatt cattgaaaat cattgatgga gttgattacc 1140 atcacgagca tccgaaatat tcggacagaa gttatgatgc cccaattatt gaatctgaaa 1200 atcatttctc tgcttccgag cagtgttacg agcataacgc taagttatta aacaaagctg 1260 tgtattcgaa aaccgccaaa gaatatatcg acagtgacat taagaaagtt aaagacttaa 1320 acttgccatt attaactaag tttacagaaa aattggtaga tatgcgttgt aacaagtcaa 1380 tagtctacga cattgtattc atgcgaactc tacttaatat gggaggctac tcaaggtcaa 1440 atcaaattac tgactttaag ggcaccatag atgacattac aaaaatgaat gatgaatacc 1500 tttccgacgt tagtgaaaat ggaaagagag ctaagatgtc tgaatggatg tatcccaaaa 1560 tggaagcatg tggatatgga ttaaccaagt ccatcttaaa tggtcaaatg gtgggagttt 1620 cgtatccatc agctagtgaa tccaaggcgc acatagaatc gtatattaca ccaaactcag 1680 ctgggatagg taatctacgg ttggatgtgg acgtcggtgg gaaaatgtat aaagttagaa 1740 ccacgtcaaa atctgcattt gtcaatgctt tgggaacaaa cattttcaat atagacacta 1800 tcagtatgga gccgatgttc ctgtctgagt atttgactca tttaaaccaa gatgagaaaa 1860 tgctgttata tgatagacgt aagaatagac aaatacaaga cattgagttg atgaggctat 1920 gtggacaaaa tgttatcggt tcacgttcaa ctactgcttg gaggcccgtt aggccaatat 1980 acattaatgt cattcaggcc cacttagctc aagctttcat aattggtcct cacataaatg 2040 caacggtcgg tcgccaacgt acaccaccta aaggtctgtg gtttactggc gaggacgttg 2100 ggattggatt tgctaccata taccaaaatg gaacttcaga cgtaatttca catgctatag 2160 aggcgtcagc atctggtaga tgtctctcgg tgctagccga ttgctcgtcg tgggatcaga 2220 catttttaac ggagtcaata ataccatact accaaggcat aaaacgtgca atcagtgagt 2280 ttggtcaagc tgatagcgaa aattattata tgtatgataa tcaaagaaaa gatgtggtag 2340 gtatgcgttt aaccgagacg attgattggt tcaatgaata ccagaaaaaa cggatcttta 2400 acgcatctta tctgggagaa agatattcat ttaaggtaca atatatgtgg tcgggaagac 2460 tagatacttt cttcatgaac tcagtacaga acgcattaat tactgaaagg atagccaatc 2520 aagtaagttc aagcgtagcc ggatccccta gcctagtttg gtttcaagta gctggagacg 2580 acgctataat ggtatataat gctaactcta taacatcatc ggatcaagtt gatgcaatca 2640 ggaaaaccgt agttgatgaa tatacggctg acaatcacat tatcaatcca caaaagaccg 2700 ttatctccca catttcagga gaatatgcta aaatatatta ctatgcaggt atgcatttta 2760 gagatccatc aatccagctg cacgagtcag agaagatatc aaaagctact aacataaccg 2820 aggtcatgag aggttacgct caagtagctt ttgaatataa taaaagggcc attgggagct 2880 tgcgtataaa ttcactatat gcacgtttat tagcatcatt agcatattca ataaatgtca 2940 aacgtagcga tgatcaatca attgagaata aatcaagtag gagaggttct aaagctaagg 3000 taagaaacac caagaccaac aaactccgat cattttcgtc cgtgaaatat tatccacctc 3060 taacatcagt gattactcca accggtgtta agggaggttt gggaatgagc ttaagtggaa 3120 tatctttaaa tgagatattg atgatcaagg aactattatt agatctagtc gaggctgggc 3180 tgaagatagt agatcaggta tcgtttgagc aaaatgagat cgtgtcaaaa tctttgatgc 3240 gacatttcct tcgtgacaga aaggacttaa ttaaggaaat gggattggat aaggggacta 3300 aacccgtgat ggcggtgcgg tatagatcct cagattcagc tttctcctca ggaaattttg 3360 aaaatggaat ctcaatgaga ttagagagct tagattcaca caaactgagt atagctaggc 3420 agtcagaagc aaagctgaaa tcagttggcg taaacctgcc aaaaatgtat acatatgaga 3480 atctgccata ctccaccata aatcaatccc ttaaagggat aactatagac aaagatctga 3540 gtcgcatgac aaactctgat ctagttgatc aattacgaag cataccggaa tctgaatgca 3600 agggtaattt gatttcaaaa tatccagtct atggattgtt taacgcaagg cggatcattt 3660 ccatggatga gaaggtggac aatccaatta gatacatatc gaccccggat gagggaaagg 3720 cgttagagcg acttatagga tcaagaacgg gaatacaatt caagaatcaa ggatatggag 3780 gatctccagc tattgttaga ttcataagga ggaatgggtt gacaataact gaagagaatc 3840 tgattgactt agtaatttca tcaggagcga tatctttagc gaatccgaaa cagaacatga 3900 ttgagttatt ccaagccata tcaggtgacc aacagtcatc acttgaactt gcgaatttct 3960 tcatgaatga aaaaccgcat tgggaagata aagccatatc gattactatc aatgggtcaa 4020 tattggaaaa ctgcgactcc agaatttcta atatatctag attcgttagt atagacgcga 4080 ttagaattcc gggtgacatt aaaaagatgt tcacatatat tgcatatgta tacatgtgtc 4140 aaatgttcat tttagatgat aatactccaa gcaaggtaca tatatcaatc aatgaagaac 4200 agttgcgtga cttcctaatt tcagcgaagc cgatatcgaa gaataggatg aagcagacaa 4260 ttgatatgaa atttagtaat cagaacagtg gtgttacaat agaaatcgat gaagagtctt 4320 tatccagaac agctgatcta gattacgaag tattgaaatt agtgcatcca ctctcggtgc 4380 cattcttgag aaatttatcg gaagggtctc ctatgtgagg agcgacgtta tgtattgacg 4440 aaccattctg taggaaggct aggtaactcg gttgggagtt atcgaaactg gctcaaaata 4500 ttgat 4505 //