ID DQ462163; SV 1; linear; genomic RNA; STD; VRL; 3006 BP. XX AC DQ462163; XX DT 01-SEP-2006 (Rel. 89, Created) DT 30-DEC-2006 (Rel. 90, Last updated, Version 3) XX DE Tomato yellow ring virus strain TYRV-s non-structural protein (NS) and DE nucleocapsid protein (N) genes, complete cds. XX KW . XX OS Tomato yellow ring virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; unclassified Tospoviridae. XX RN [1] RP 1-3006 RX DOI; 10.1007/s00705-006-0827-7. RX PUBMED; 16932983. RA Hassani-Mehraban A., Saaijer J., Peters D., Goldbach R., Kormelink R.; RT "Molecular and biological comparison of two Tomato yellow ring virus (TYRV) RT isolates: challenging the Tospovirus species concept"; RL Arch. Virol. 152(1):85-96(2007). XX RN [2] RP 1-3006 RA Hassani-Mehraban A., Saaijer J., Peters D., Goldbach R., Kormelink R.; RT ; RL Submitted (24-MAR-2006) to the INSDC. RL Laboratory of Virology, Wageningen University, Binnenhaven 11, Wageningen RL 6709 PD, The Netherlands XX DR MD5; 8f44a81c81389d7828b1f069eb1a1e48. XX FH Key Location/Qualifiers FH FT source 1..3006 FT /organism="Tomato yellow ring virus" FT /segment="S" FT /host="soybean" FT /strain="TYRV-s" FT /mol_type="genomic RNA" FT /country="Iran" FT /note="acronym: TYRV" FT /db_xref="taxon:304859" FT gene 72..1403 FT /gene="NS" FT CDS 72..1403 FT /codon_start=1 FT /gene="NS" FT /product="non-structural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q0GY53" FT /protein_id="ABF59485.1" FT /translation="MSTVKTTAVEFFSNYGISCDSRSSNDCYRIFSGEGKTLMDVFMHS FT TIGIKPAFSIGNLGRNEDIKANEAEIIDEHHNYDIFDKFGLDINFCNHFMEITVKKPSV FT KNYETKFQMHNQIFEPSSNLLKQGVGKMSETDFYSCSNLSKDDMYPSEWFINEARRKNF FT FMADVSGFNLDYGFSVMGKTTSYWKENMDKTSLISVKQKSMNNPLVPTNRLLSASTIKA FT IEIASNIACNKSTILAVKQDLTSDLKTQFRISLPGEYNETAIARTFLINQGKKGQYICI FT YAKTVMDRSNERTTLIIKVVTQSRPGEYISTLLPKDHSDCRRVVGASFGIVEQKPTDPN FT YNKIIAHELLSVHTNFALKISKVLKKPVIVYKIYDKELLPKKVEIDGRTFNYQEDIDGN FT VYFLSTTLAILPLSVSVLFYLESASPSCWKESRGLGHFTVEEVQ" FT gene complement(2110..2934) FT /gene="N" FT CDS complement(2110..2934) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q0GY52" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q0GY52" FT /protein_id="ABF59486.1" FT /translation="MSTARVSKEKIEKLLAGGEADVVIEAEEAAGFNFKEFVLANKTMK FT MTFNNGYTILRIRAGIYKMVKAGQFKFQGKPIVVPSATVSAGQDDWTFRRLEGFIRAKM FT FMELIAVENVAEQQKMYEKLCELPMVSAYGLKPSSKFDATTARVMLTLGGPLPLMASLD FT KFAACASPLAYFQNVKKESLGISKFSTYEQLCKIARVMATKGFDFADVSKDIFEETIKI FT LNDCTPGAAGAASLNKFNEQIKALESTFGKIVDDTGAGSSKPKPTSKKNDAF" XX SQ Sequence 3006 BP; 1017 A; 569 C; 496 G; 924 T; 0 other; agagcaatcg agggtataag caaaaatcat caacaacttt aaacaaagta agcagcaata 60 ctatctcagc catgtctacc gtcaaaacaa cagcagttga attcttctca aactatggaa 120 tctcctgtga ctctcgttca agcaacgatt gctacagaat cttctctggt gagggaaaaa 180 ctctcatgga tgtttttatg cactcaacga ttggaatcaa gcctgctttc agtattggaa 240 atctcgggag gaatgaggac atcaaagcca atgaagcaga gatcattgat gagcatcaca 300 actatgatat ttttgataag tttggcttgg acataaattt ttgcaaccat ttcatggaaa 360 ttactgttaa gaagccatcg gtaaaaaact atgagacaaa attccaaatg cataaccaga 420 tatttgaacc ctcgtcaaat ttgctcaagc aaggtgttgg caaaatgtct gaaactgatt 480 tttattcttg ctcaaacctt tccaaggatg acatgtatcc aagtgaatgg tttataaatg 540 aagctagaag aaagaatttt tttatggctg atgtttctgg gttcaacctg gattatggtt 600 tttctgttat gggtaaaact acttcttatt ggaaggaaaa catggacaaa acatcattga 660 tctctgtcaa gcagaaatcc atgaacaacc ctttggtgcc tacaaacagg ctcttatcag 720 cttctacaat aaaagcaata gagattgcat ccaatattgc ctgcaacaaa tcaactatac 780 tcgcagtcaa gcaagatctg acttcagatc tcaaaactca atttaggatc tcattgcctg 840 gagaatacaa tgaaacagct atagctagga cattcttaat caatcaagga aagaaaggtc 900 aatacatttg catttatgct aaaactgtta tggacagatc caatgaaagg accacattaa 960 tcataaaagt tgtcactcaa agcagacctg gagagtacat ttcaactcta cttccaaaag 1020 atcactcaga ttgcagaaga gtggttggag ctagttttgg gattgttgag cagaaaccga 1080 cagatccaaa ttataacaag ataattgcgc atgaactact ttctgtgcac acaaactttg 1140 ctttaaagat atccaaagtt ttaaagaagc ctgtgatagt ctataaaatc tatgataaag 1200 aattgttacc aaaaaaagtg gaaatagatg gtagaacatt taactaccaa gaagacattg 1260 atggaaatgt ttactttctg tctaccactc ttgcaatcct gcctctatct gtttctgttt 1320 tattttatct tgaatctgct tccccatcct gctggaaaga atccagaggg ttaggacatt 1380 tcactgtaga agaggtgcag tgacaaaaga aagcatctat cggcagtgta agggtttatt 1440 tcattatatt acatgctact agtactctat ttaaattgct tgttaagtta aatgttattt 1500 tctatcactc taattacctt taagttttac ttattagaat aagctataga agtttagaac 1560 tgtttaaaac taaaataaac taagtaaagt gtgtcaataa attaaaaata aataaaagca 1620 aataaaaata aaataaatca aaaaacaaaa aaattaaaaa tcaaaaaacc aaaaaaagcc 1680 tacgggcaaa ttctgacttc catacccata tgaaattatc ggtgtgaaac ccagagtttg 1740 cccgtaggct ttttttggtt ttttgtattt ttttattttt tgttttgttt ttgtttttct 1800 tttatatgta tatttattta acttattaaa cactcttatg tataattgag cacacattta 1860 agtaatataa acataacaga acttattaaa acactcgtaa gcataattga acacacacta 1920 gagtataaca aacaatacaa acttaaacac actgataaac tatatagcaa acaggaaact 1980 gaaatatagg attataaaca tatataaata aaatacacac ataatgacta gaaatacttt 2040 agtaatctta aatattacac aatactaaac gatagcagaa aatactttta caacttgcaa 2100 aagcatttat taaaatgcat cgttcttttt ggaggtaggc ttgggtttag aagacccagc 2160 accagtgtca tcaacaatct ttccaaaggt gctttcaaga gctttaatct gctcattgaa 2220 tttgttcaat gaagcagcac cagcagctcc tggagtgcag tcattgagga tttttatggt 2280 ttcttcaaag atgtccttgg aaacatcagc aaaatcaaat cccttagtag ccattactct 2340 ggcgatcttg cacagctgct cataagttga aaatttactt atgcctaaag attctttctt 2400 tacattctga aaataagcca gtggagatgc acatgcagca aatttatcaa gacttgccat 2460 cagagggaga ggaccaccca atgtcaacat tactctggct gtggttgcat caaactttga 2520 gctcggtttc aaaccatatg cgctcaccat gggaagctca caaagcttct catacatttt 2580 ctgctgctca gccacatttt ccacagcaat cagctccatg aacatctttg ctctgatgaa 2640 gccctccaac cttctgaatg tccaatcatc ttgaccagca ctcacagtag cactaggcac 2700 aacaataggc tttccttgga atttaaattg acctgctttt accattttgt aaatccctgc 2760 tctgatcctt aaaattgtgt aaccgttatt gaatgtcatc ttcatggttt tgttagccag 2820 aacaaactcc ttgaagttga accctgcagc ttcctcagcc tcgatcacta catctgcttc 2880 gccaccggca agaagcttct caattttctc tttgcttacc cttgcggtag acatggtgtt 2940 tacttaggaa gcggtttact ttttctgaag ttgtttgaat ttaatgtgtt atacgtcgat 3000 tgctct 3006 //