Dbfetch
ID DQ443025; SV 1; linear; genomic RNA; STD; VRL; 1828 BP. XX AC DQ443025; XX DT 06-APR-2006 (Rel. 87, Created) DT 01-AUG-2006 (Rel. 88, Last updated, Version 2) XX DE Pelargonium flower break virus isolate PV-0201 clone 2 putative movement DE protein (p7), putative movement protein (p12), and coat protein (CP) genes, DE complete cds. XX KW . XX OS Pelargonium flower break virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphacarmovirus. XX RN [1] RP 1-1828 RX DOI; 10.1128/JVI.00603-06. RX PUBMED; 16873268. RA Rico P., Ivars P., Elena S.F., Hernandez C.; RT "Insights into the selective pressures restricting Pelargonium flower break RT virus genome variability: Evidence for host adaptation"; RL J. Virol. 80(16):8124-8132(2006). XX RN [2] RP 1-1828 RA Rico P., Ivars P., Elena S.F., Hernandez C.; RT ; RL Submitted (06-MAR-2006) to the INSDC. RL Biologia del estres, Instituto de Biologia Molecular y Celular de Plantas, RL Avda. de los Naranjos s/n, Valencia, Valencia 46022, Spain XX DR MD5; bcf71bb96a9d54835752f9a692277f7c. DR EuropePMC; PMC1563836; 16873268. XX FH Key Location/Qualifiers FH FT source 1..1828 FT /organism="Pelargonium flower break virus" FT /host="Pelargonium" FT /isolate="PV-0201" FT /mol_type="genomic RNA" FT /country="Germany" FT /clone="2" FT /db_xref="taxon:35291" FT gene 193..399 FT /gene="p7" FT CDS 193..399 FT /codon_start=1 FT /gene="p7" FT /product="putative movement protein" FT /db_xref="GOA:Q70WT9" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q70WT9" FT /protein_id="ABD93277.1" FT /translation="MASKVIVPDLGSDNEIDVSVGGRGNRGKQKGKISVAKDAVSKRTS FT DGGNGGSWVVVAETVSVNIHFNF" FT gene 233..553 FT /gene="p12" FT CDS 233..553 FT /codon_start=1 FT /gene="p12" FT /product="putative movement protein" FT /db_xref="GOA:Q1PGE5" FT /db_xref="UniProtKB/TrEMBL:Q1PGE5" FT /protein_id="ABD93278.1" FT /translation="MRLTCQWEDVGIGENRRVRYPSQRTLSPNGHLMVVMGVLGLLWLR FT PFRSIYTSTFSMPPLINLQHILNLTLLSLILSSFILAERVTHNQYSNDNSKAQYIRIST FT GQ" FT gene 555..1592 FT /gene="CP" FT CDS 555..1592 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q1PGI0" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q1PGI0" FT /protein_id="ABD93279.1" FT /translation="MDAYKNDPIVRQAVAKGVAWAVKLNTRGWSSLTTQQKKVARSALS FT VTQPPAVVVPRRTRVRNPVPAGLKSGNGKAGKSSTLTRSEFICNVSSTTGVTPTFQSWI FT INPREVKSFPQSSVCSVGYNKYRITDFRIRFSTSCSDTMNGKVAIGFTPDSSDPVPVDK FT SQLYGMQVYADTPAKESVTLKTAADNTIRFLRDSSSDDAKLVDYGRVVLATYGFDSTAP FT SVIGELFFEYTVVYLDPTYVVALTQYGTLTTSSGPPYATLTTTATSTSIELNTHGKWLV FT VWISADEVINSPVISGSGASGSVTVVSDAQTTVVAVVTANLPGAIISNASTAAPSSLEW FT YVSRL" XX SQ Sequence 1828 BP; 462 A; 442 C; 487 G; 437 T; 0 other; atcaggaacg tacaggttag cccagaattc ttctagggcc tatggttcag ttagcgagat 60 ggcgcgtttt agtttcttcc tggcgtttgg agttatccca gatgctcaga ttgccttaga 120 gaaacacata agaggcatgc ccgtcgcagc tgaatttggg cccgatgaaa gtctggcaga 180 ccacacaatt gaatggcttc taaagtgatc gttcctgatt tgggtagtga taatgagatt 240 gacgtgtcag tgggaggacg tgggaatagg ggaaaacaga agggtaagat atccgtcgca 300 aaggacgctg tctccaaacg gacatctgat ggtggtaatg ggggttcttg ggttgttgtg 360 gctgagaccg tttcggtcaa tatacacttc aacttttagt atgccccctc tgataaacct 420 ccaacacata ctgaatctta ccttgttatc cttgattcta agttctttca tcttggcaga 480 gagagtaacg cacaatcagt actcaaacga caacagcaaa gcgcaatata tacggatctc 540 aactgggcaa tagtatggac gcctacaaga atgacccaat agttaggcag gcagtggcaa 600 agggagtagc ttgggcggtt aagctaaaca ctagagggtg gtcttcattg accacccaac 660 agaagaaagt tgcgcgctca gctctgtctg tgacacaacc cccagcggtg gttgtacctc 720 gcagaaccag agtacgaaac ccagtacccg cgggcctgaa atcagggaat ggcaaggcag 780 ggaagagctc aactctaacc cgatcggagt ttatctgcaa cgtatcgagc acaaccgggg 840 tgaccccgac tttccaatca tggatcataa atcctaggga ggtcaaaagt ttcccacaat 900 cttccgtctg ctcggttggc tacaacaagt acaggatcac ggacttcagg attaggtttt 960 ccacctcctg ttccgacact atgaatggga aggtggccat cggcttcact cctgattcta 1020 gcgatccggt tcctgttgat aagtcacagc tgtacgggat gcaggtgtat gccgacaccc 1080 cagcaaagga gtcggtcacc ttgaagacgg ctgcagataa cacgattagg ttcctgcggg 1140 attcatccag cgatgatgcc aagctggtgg attatggccg cgtagtttta gccacatacg 1200 gtttcgatag cacagctccg tcagtgatag gagagctgtt ctttgagtac accgtagttt 1260 atctcgaccc tacctatgtc gtggctttaa cacaatatgg cacgttgacc acctcatctg 1320 gccccccata tgctaccttg accaccactg ccacttcaac atccatagaa ttaaacaccc 1380 atggaaagtg gctagtggtt tggatctcgg cagacgaggt gatcaactct ccggttatat 1440 ccgggtccgg ggcaagcgga tccgtaactg tcgtcagcga cgcacagact actgttgttg 1500 cagtggtcac tgcaaacttg ccaggtgcca tcatttccaa cgcttcaacc gctgcccctt 1560 cgtcactgga gtggtacgta tctaggctat gagagagcag tcaccctacc ttctgccaga 1620 ggttcccgga ggagtagtga tcctttgggg gtgattcata gcttggaaag gtcggagagt 1680 tggggggagg ccaactgggg gaggtgctag gagcaccaga ggcagtagag caaaaatccg 1740 ggtttcatcg cctggtgcgg gcgctcaatg ctgctaacaa gttcctgaag gaagaaaggt 1800 tttggtcgat ggagacctta acccgccc 1828 //